Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5323

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
6,116,966	+		Pf6N2E2_5321	0.71	-1.9
6,116,966	+		Pf6N2E2_5321	0.71	-0.3
6,116,967	-		Pf6N2E2_5321	0.71	+1.5
6,116,967	-		Pf6N2E2_5321	0.71	+0.9
6,117,029	+		Pf6N2E2_5321	0.78	+1.1
6,117,029	+		Pf6N2E2_5321	0.78	-0.4
6,117,059	+		Pf6N2E2_5321	0.82	+0.5
6,117,059	+		Pf6N2E2_5321	0.82	-0.7
6,117,059	+		Pf6N2E2_5321	0.82	+0.2
6,117,059	+		Pf6N2E2_5321	0.82	+1.0
6,117,059	+		Pf6N2E2_5321	0.82	+0.7
6,117,059	+		Pf6N2E2_5321	0.82	-0.5
6,117,059	+		Pf6N2E2_5321	0.82	+0.2
6,117,060	-		Pf6N2E2_5321	0.82	+0.9
6,117,060	-		Pf6N2E2_5321	0.82	-2.1
6,117,060	-		Pf6N2E2_5321	0.82	-0.5
6,117,060	-		Pf6N2E2_5321	0.82	+0.4
6,117,060	-		Pf6N2E2_5321	0.82	+0.7
6,117,068	+		Pf6N2E2_5321	0.83	-0.3
6,117,068	+		Pf6N2E2_5321	0.83	+0.6
6,117,068	+		Pf6N2E2_5321	0.83	+1.8
6,117,068	+		Pf6N2E2_5321	0.83	-1.3
6,117,086	+		Pf6N2E2_5321	0.85	+0.8
6,117,209	+				-0.8
6,117,209	+				+1.1
6,117,209	+				-0.5
6,117,209	+				+0.9
6,117,210	-				+0.5
6,117,210	-				-0.4
6,117,218	+				-0.3
6,117,218	+				-1.3
6,117,218	+				+0.5
6,117,219	-				-0.2
6,117,219	-				-0.7
6,117,219	-				+0.1
6,117,219	-				+0.3
6,117,340	+				-0.6
6,117,355	+				-0.6
6,117,377	-				+0.7
6,117,377	-				-1.4
6,117,377	-				+0.5
6,117,377	-				-1.8
6,117,380	+				-0.1
6,117,380	+				+0.0
6,117,406	+				-0.4
6,117,406	+				-0.3
6,117,407	-				+0.9
6,117,431	+				+0.0
6,117,431	+				-1.0
6,117,431	+				+0.6
6,117,431	+				-0.3
6,117,431	+				+0.0
6,117,431	+				-0.5
6,117,432	-				+0.3
6,117,436	+				+0.7
6,117,436	+				+0.1
6,117,436	+				-0.2
6,117,437	-				+1.9
6,117,437	-				+0.3
6,117,511	+		Pf6N2E2_5322	0.23	-0.1
6,117,526	-		Pf6N2E2_5322	0.28	+1.0
6,117,574	-		Pf6N2E2_5322	0.43	-0.5
6,117,595	+		Pf6N2E2_5322	0.50	+0.8
6,117,595	+		Pf6N2E2_5322	0.50	+0.6
6,117,595	+		Pf6N2E2_5322	0.50	+0.5
6,117,595	+		Pf6N2E2_5322	0.50	+0.8
6,117,595	+		Pf6N2E2_5322	0.50	+0.6
6,117,595	+		Pf6N2E2_5322	0.50	-0.5
6,117,595	+		Pf6N2E2_5322	0.50	+0.0
6,117,595	+		Pf6N2E2_5322	0.50	-0.1
6,117,595	+		Pf6N2E2_5322	0.50	-0.3
6,117,595	+		Pf6N2E2_5322	0.50	+0.5
6,117,595	+		Pf6N2E2_5322	0.50	-0.8
6,117,595	+		Pf6N2E2_5322	0.50	+0.9
6,117,596	-		Pf6N2E2_5322	0.50	-1.3
6,117,596	-		Pf6N2E2_5322	0.50	+1.5
6,117,596	-		Pf6N2E2_5322	0.50	-0.6
6,117,596	-		Pf6N2E2_5322	0.50	+0.9
6,117,596	-		Pf6N2E2_5322	0.50	+0.1
6,117,914	+				-1.5
6,117,914	+				-0.3
6,117,915	-				-0.4
6,117,915	-				+0.1
6,117,915	-				-0.3
6,117,915	-				+1.0
6,117,939	+				+0.0
6,117,939	+				+2.0
6,117,939	+				+1.0
6,117,940	-				+0.1
6,117,940	-				+0.7
6,118,079	+		Pf6N2E2_5323	0.20	-0.5
6,118,268	+		Pf6N2E2_5323	0.47	+1.1
6,118,269	-		Pf6N2E2_5323	0.47	-0.1
6,118,288	-		Pf6N2E2_5323	0.50	+1.3
6,118,320	+		Pf6N2E2_5323	0.54	+1.0
6,118,321	-		Pf6N2E2_5323	0.54	+0.9
6,118,321	-		Pf6N2E2_5323	0.54	+0.6
6,118,321	-		Pf6N2E2_5323	0.54	-0.1
6,118,321	-		Pf6N2E2_5323	0.54	+0.4
6,118,428	+		Pf6N2E2_5323	0.70	+1.6
6,118,655	-				-0.5
6,118,709	-				+1.0
6,118,713	+				+0.3
6,118,713	+				+0.8
6,118,713	+				-0.5
6,118,788	-				+1.2
6,118,951	-		Pf6N2E2_5324	0.19	+0.4
6,119,317	-		Pf6N2E2_5324	0.54	+1.1
6,119,359	-		Pf6N2E2_5324	0.58	-0.5
6,119,403	+		Pf6N2E2_5324	0.62	+0.5
6,119,441	+		Pf6N2E2_5324	0.66	+0.4
6,119,441	+		Pf6N2E2_5324	0.66	+2.1
6,119,441	+		Pf6N2E2_5324	0.66	+2.1
6,119,442	-		Pf6N2E2_5324	0.66	-0.4
6,119,442	-		Pf6N2E2_5324	0.66	+1.1
6,119,442	-		Pf6N2E2_5324	0.66	-1.5
6,119,442	-		Pf6N2E2_5324	0.66	+0.2
6,119,468	+		Pf6N2E2_5324	0.68	+0.7
6,119,505	-		Pf6N2E2_5324	0.72	-0.1
6,119,505	-		Pf6N2E2_5324	0.72	-0.3
6,119,505	-		Pf6N2E2_5324	0.72	+0.3
6,119,505	-		Pf6N2E2_5324	0.72	+1.1
6,119,534	+		Pf6N2E2_5324	0.75	+0.9
6,119,535	-		Pf6N2E2_5324	0.75	+0.6