Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4944

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
5,699,782	-				+0.2
5,699,801	-				+0.3
5,699,801	-				+0.2
5,699,801	-				+0.2
5,700,007	+		Pf6N2E2_4943	0.29	+0.5
5,700,007	+		Pf6N2E2_4943	0.29	+0.6
5,700,503	-				-0.2
5,700,503	-				+0.5
5,700,619	+				-0.1
5,700,619	+				-0.4
5,700,619	+				-0.8
5,700,619	+				+0.2
5,700,619	+				-0.3
5,700,619	+				-0.3
5,700,620	-				-1.2
5,700,620	-				-1.6
5,700,642	-				-0.3
5,700,642	-				+0.7
5,700,656	+				+0.5
5,700,656	+				-1.6
5,700,684	+				-0.7
5,700,685	-				-0.7
5,700,685	-				+1.3
5,700,715	+				-0.0
5,700,798	-				-1.2
5,700,798	-				+0.3
5,700,798	-				+0.2
5,700,798	-				-0.5
5,700,798	-				-0.6
5,700,798	-				-1.6
5,700,925	+		Pf6N2E2_4944	0.15	-1.6
5,700,926	-		Pf6N2E2_4944	0.15	-0.2
5,700,926	-		Pf6N2E2_4944	0.15	+0.3
5,700,929	+		Pf6N2E2_4944	0.15	+0.7
5,700,929	+		Pf6N2E2_4944	0.15	-1.0
5,700,929	+		Pf6N2E2_4944	0.15	-0.4
5,700,929	+		Pf6N2E2_4944	0.15	-0.8
5,700,929	+		Pf6N2E2_4944	0.15	-0.4
5,700,930	-		Pf6N2E2_4944	0.15	+0.4
5,700,930	-		Pf6N2E2_4944	0.15	-1.7
5,700,930	-		Pf6N2E2_4944	0.15	+0.0
5,700,935	+		Pf6N2E2_4944	0.16	+1.1
5,700,935	+		Pf6N2E2_4944	0.16	+0.2
5,700,936	-		Pf6N2E2_4944	0.16	-1.4
5,700,936	-		Pf6N2E2_4944	0.16	-0.3
5,701,030	+		Pf6N2E2_4944	0.25	+0.8
5,701,083	+		Pf6N2E2_4944	0.30	+0.0
5,701,083	+		Pf6N2E2_4944	0.30	-0.8
5,701,083	+		Pf6N2E2_4944	0.30	+1.0
5,701,083	+		Pf6N2E2_4944	0.30	-2.0
5,701,084	-		Pf6N2E2_4944	0.30	-0.1
5,701,084	-		Pf6N2E2_4944	0.30	-0.8
5,701,606	-		Pf6N2E2_4944	0.81	+0.5
5,701,640	+		Pf6N2E2_4944	0.84	+0.1
5,701,640	+		Pf6N2E2_4944	0.84	+0.1
5,701,640	+		Pf6N2E2_4944	0.84	-0.1
5,701,641	-		Pf6N2E2_4944	0.84	-0.1
5,701,669	+		Pf6N2E2_4944	0.87	-0.8
5,701,670	-		Pf6N2E2_4944	0.87	-0.9
5,701,670	-		Pf6N2E2_4944	0.87	+0.0
5,701,757	+				+0.0
5,701,757	+				-0.0
5,701,757	+				-0.5
5,701,757	+				+0.3
5,701,757	+				-2.0
5,701,757	+				-0.9
5,701,757	+				-0.3
5,701,758	-				+0.1
5,701,758	-				+0.1
5,701,758	-				-0.5
5,701,758	-				-0.7
5,701,802	+				+0.5
5,702,025	+		Pf6N2E2_4945	0.35	-0.5
5,702,025	+		Pf6N2E2_4945	0.35	-0.7
5,702,026	-		Pf6N2E2_4945	0.35	-0.9
5,702,026	-		Pf6N2E2_4945	0.35	-1.2
5,702,026	-		Pf6N2E2_4945	0.35	+0.1
5,702,044	-		Pf6N2E2_4945	0.38	+0.4
5,702,044	-		Pf6N2E2_4945	0.38	-0.1
5,702,044	-		Pf6N2E2_4945	0.38	-1.6
5,702,109	+		Pf6N2E2_4945	0.48	-1.2
5,702,110	-		Pf6N2E2_4945	0.48	+0.9
5,702,110	-		Pf6N2E2_4945	0.48	+1.0
5,702,118	+		Pf6N2E2_4945	0.49	-1.5
5,702,118	+		Pf6N2E2_4945	0.49	-0.4
5,702,119	-		Pf6N2E2_4945	0.49	+1.4
5,702,119	-		Pf6N2E2_4945	0.49	-1.7
5,702,119	-		Pf6N2E2_4945	0.49	+1.6
5,702,119	-		Pf6N2E2_4945	0.49	+0.8
5,702,190	+		Pf6N2E2_4945	0.60	-0.7
5,702,212	-		Pf6N2E2_4945	0.63	+0.8
5,702,292	+		Pf6N2E2_4945	0.76	+0.7
5,702,319	+		Pf6N2E2_4945	0.80	+0.1
5,702,320	-		Pf6N2E2_4945	0.80	+0.5
5,702,427	+				+0.8
5,702,427	+				+0.7
5,702,428	-				-1.8
5,702,428	-				+0.0
5,702,428	-				+1.0
5,702,428	-				-1.1
5,702,456	-				-0.2
5,702,526	+		Pf6N2E2_4946	0.13	-1.1
5,702,526	+		Pf6N2E2_4946	0.13	-1.2
5,702,527	-		Pf6N2E2_4946	0.14	-1.2
5,702,527	-		Pf6N2E2_4946	0.14	+0.7
5,702,527	-		Pf6N2E2_4946	0.14	+0.7
5,702,527	-		Pf6N2E2_4946	0.14	-0.3
5,702,527	-		Pf6N2E2_4946	0.14	-0.1
5,702,571	+		Pf6N2E2_4946	0.24	-0.3
5,702,571	+		Pf6N2E2_4946	0.24	+2.3
5,702,571	+		Pf6N2E2_4946	0.24	+0.4
5,702,571	+		Pf6N2E2_4946	0.24	-0.6
5,702,572	-		Pf6N2E2_4946	0.24	+0.1
5,702,572	-		Pf6N2E2_4946	0.24	+0.7
5,702,572	-		Pf6N2E2_4946	0.24	-0.6
5,702,572	-		Pf6N2E2_4946	0.24	-0.7