Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4901

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
5,652,854	+				+0.4
5,652,854	+				-0.8
5,652,855	-				-0.8
5,652,855	-				-0.9
5,652,855	-				-0.3
5,652,890	+				+0.6
5,652,890	+				-0.2
5,652,891	-				-0.4
5,652,891	-				+1.0
5,652,891	-				-0.9
5,653,053	-		Pf6N2E2_4900	0.25	-0.5
5,653,337	+		Pf6N2E2_4900	0.54	-1.3
5,653,337	+		Pf6N2E2_4900	0.54	+0.7
5,653,338	-		Pf6N2E2_4900	0.54	-0.6
5,653,338	-		Pf6N2E2_4900	0.54	-0.3
5,653,413	-		Pf6N2E2_4900	0.61	+0.6
5,653,413	-		Pf6N2E2_4900	0.61	-0.1
5,653,441	+		Pf6N2E2_4900	0.64	-0.5
5,653,473	-		Pf6N2E2_4900	0.67	-0.4
5,653,526	+		Pf6N2E2_4900	0.73	-0.1
5,653,526	+		Pf6N2E2_4900	0.73	+0.1
5,653,526	+		Pf6N2E2_4900	0.73	+0.6
5,653,526	+		Pf6N2E2_4900	0.73	-0.1
5,653,526	+		Pf6N2E2_4900	0.73	-0.2
5,653,526	+		Pf6N2E2_4900	0.73	-0.3
5,653,526	+		Pf6N2E2_4900	0.73	+0.4
5,653,527	-		Pf6N2E2_4900	0.73	+0.2
5,653,527	-		Pf6N2E2_4900	0.73	-1.0
5,653,527	-		Pf6N2E2_4900	0.73	-0.5
5,653,527	-		Pf6N2E2_4900	0.73	+0.8
5,653,527	-		Pf6N2E2_4900	0.73	+0.5
5,653,527	-		Pf6N2E2_4900	0.73	-2.5
5,653,527	-		Pf6N2E2_4900	0.73	-0.3
5,653,527	-		Pf6N2E2_4900	0.73	+0.5
5,653,556	+		Pf6N2E2_4900	0.76	-1.7
5,653,556	+		Pf6N2E2_4900	0.76	-0.9
5,653,556	+		Pf6N2E2_4900	0.76	+1.0
5,653,556	+		Pf6N2E2_4900	0.76	+0.7
5,653,556	+		Pf6N2E2_4900	0.76	-0.1
5,653,556	+		Pf6N2E2_4900	0.76	-1.2
5,653,557	-		Pf6N2E2_4900	0.76	-2.2
5,653,557	-		Pf6N2E2_4900	0.76	-0.6
5,653,557	-		Pf6N2E2_4900	0.76	+0.1
5,653,557	-		Pf6N2E2_4900	0.76	+1.3
5,653,557	-		Pf6N2E2_4900	0.76	+1.3
5,653,557	-		Pf6N2E2_4900	0.76	+0.1
5,653,557	-		Pf6N2E2_4900	0.76	-1.0
5,653,557	-		Pf6N2E2_4900	0.76	+0.0
5,653,557	-		Pf6N2E2_4900	0.76	+0.7
5,653,557	-		Pf6N2E2_4900	0.76	-0.5
5,653,557	-		Pf6N2E2_4900	0.76	+0.6
5,653,853	-				+0.7
5,653,853	-				-1.1
5,653,990	-		Pf6N2E2_4901	0.16	-1.3
5,654,151	+		Pf6N2E2_4901	0.28	-0.6
5,654,152	-		Pf6N2E2_4901	0.28	-0.6
5,654,158	-				+2.7
5,654,158	-		Pf6N2E2_4901	0.29	-0.4
5,654,158	-		Pf6N2E2_4901	0.29	-1.9
5,654,158	-		Pf6N2E2_4901	0.29	-1.5
5,654,184	+		Pf6N2E2_4901	0.31	-1.5
5,654,184	+		Pf6N2E2_4901	0.31	-1.2
5,654,184	+		Pf6N2E2_4901	0.31	+1.1
5,654,185	-		Pf6N2E2_4901	0.31	+1.6
5,654,185	-		Pf6N2E2_4901	0.31	+0.7
5,654,185	-		Pf6N2E2_4901	0.31	+0.6
5,654,185	-		Pf6N2E2_4901	0.31	-2.2
5,654,185	-		Pf6N2E2_4901	0.31	+0.6
5,654,185	-		Pf6N2E2_4901	0.31	-0.1
5,654,190	+		Pf6N2E2_4901	0.31	-0.3
5,654,190	+		Pf6N2E2_4901	0.31	+1.0
5,654,190	+		Pf6N2E2_4901	0.31	-0.8
5,654,191	-		Pf6N2E2_4901	0.31	+1.7
5,654,191	-		Pf6N2E2_4901	0.31	-1.1
5,654,191	-		Pf6N2E2_4901	0.31	+1.1
5,654,252	+		Pf6N2E2_4901	0.36	+0.5
5,654,252	+		Pf6N2E2_4901	0.36	-1.2
5,654,252	+		Pf6N2E2_4901	0.36	+0.8
5,654,253	-		Pf6N2E2_4901	0.36	-0.5
5,654,316	+		Pf6N2E2_4901	0.41	+0.3
5,654,317	-		Pf6N2E2_4901	0.41	+0.1
5,654,317	-		Pf6N2E2_4901	0.41	-0.9
5,654,317	-		Pf6N2E2_4901	0.41	+0.8
5,654,317	-		Pf6N2E2_4901	0.41	-0.7
5,654,367	+		Pf6N2E2_4901	0.45	+0.5
5,654,368	-		Pf6N2E2_4901	0.45	+0.0
5,654,368	-		Pf6N2E2_4901	0.45	+0.6
5,654,368	-		Pf6N2E2_4901	0.45	-0.2
5,654,484	+		Pf6N2E2_4901	0.54	+1.1
5,654,484	+		Pf6N2E2_4901	0.54	-1.4
5,654,485	-		Pf6N2E2_4901	0.54	+0.5
5,654,485	-		Pf6N2E2_4901	0.54	-0.3
5,654,485	-		Pf6N2E2_4901	0.54	+1.5
5,654,485	-		Pf6N2E2_4901	0.54	+0.8
5,654,517	-		Pf6N2E2_4901	0.56	-0.1
5,654,568	+		Pf6N2E2_4901	0.60	+0.8
5,654,568	+		Pf6N2E2_4901	0.60	-1.4
5,654,949	+		Pf6N2E2_4901	0.89	+0.3
5,654,949	+		Pf6N2E2_4901	0.89	-1.4
5,654,950	-		Pf6N2E2_4901	0.90	-0.6
5,654,950	-		Pf6N2E2_4901	0.90	-0.9
5,655,001	-				+1.2
5,655,085	+				+1.0
5,655,085	+				+1.0
5,655,085	+				-1.2
5,655,085	+				+1.3
5,655,085	+				-0.6
5,655,086	-				+0.2
5,655,086	-				+0.2
5,655,086	-				+0.5
5,655,139	+				-0.6
5,655,139	+				-1.3
5,655,139	+				+1.6
5,655,139	+				-1.2
5,655,139	+				-0.5
5,655,139	+				-1.7
5,655,139	+				+0.3
5,655,139	+				+0.5
5,655,139	+				-1.4
5,655,140	-				+0.0
5,655,140	-				+0.7
5,655,140	-				+0.2
5,655,140	-				-0.5
5,655,140	-				-0.1
5,655,140	-				+1.0
5,655,140	-				-0.7
5,655,140	-				-0.5
5,655,182	+		Pf6N2E2_4902	0.12	-0.4
5,655,182	+		Pf6N2E2_4902	0.12	+1.6
5,655,182	+		Pf6N2E2_4902	0.12	+0.5
5,655,182	+		Pf6N2E2_4902	0.12	+0.3
5,655,182	+		Pf6N2E2_4902	0.12	-0.2
5,655,182	+		Pf6N2E2_4902	0.12	+2.0
5,655,183	-		Pf6N2E2_4902	0.12	-0.0
5,655,183	-		Pf6N2E2_4902	0.12	-0.8
5,655,183	-		Pf6N2E2_4902	0.12	-0.8
5,655,183	-		Pf6N2E2_4902	0.12	+0.5
5,655,183	-		Pf6N2E2_4902	0.12	+0.1
5,655,505	+		Pf6N2E2_4902	0.52	-0.8
5,655,505	+		Pf6N2E2_4902	0.52	+0.7
5,655,505	+		Pf6N2E2_4902	0.52	+0.3
5,655,505	+		Pf6N2E2_4902	0.52	-0.9
5,655,505	+		Pf6N2E2_4902	0.52	+1.5
5,655,506	-		Pf6N2E2_4902	0.52	+0.2
5,655,506	-		Pf6N2E2_4902	0.52	-0.2
5,655,632	+		Pf6N2E2_4902	0.68	-1.0
5,655,632	+		Pf6N2E2_4902	0.68	-1.7
5,655,632	+		Pf6N2E2_4902	0.68	-1.9
5,655,979	+				-0.8
5,655,979	+				-0.7