Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4811

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
5,561,477	+		Pf6N2E2_4809	0.83	+1.1
5,561,477	+		Pf6N2E2_4809	0.83	-0.7
5,561,478	-		Pf6N2E2_4809	0.83	+0.3
5,561,478	-		Pf6N2E2_4809	0.83	-0.0
5,561,478	-		Pf6N2E2_4809	0.83	+1.4
5,561,478	-		Pf6N2E2_4809	0.83	-0.0
5,561,478	-		Pf6N2E2_4809	0.83	-0.2
5,561,478	-		Pf6N2E2_4809	0.83	+1.4
5,561,530	+		Pf6N2E2_4809	0.88	+0.6
5,561,531	-		Pf6N2E2_4809	0.88	+0.2
5,561,560	+				-0.1
5,561,560	+				+1.3
5,561,560	+				+0.3
5,561,560	+				+1.1
5,561,560	+				+0.5
5,561,560	+				-0.2
5,561,560	+				+1.1
5,561,560	+				+0.9
5,561,560	+				+0.3
5,561,560	+				+1.3
5,561,560	+				+0.7
5,561,560	+				+1.5
5,561,560	+				+0.2
5,561,561	-				+0.4
5,561,561	-				-1.7
5,561,561	-				+0.7
5,561,561	-				+1.0
5,561,561	-				-0.5
5,561,561	-				-0.4
5,561,561	-				-0.4
5,561,561	-				+1.2
5,561,561	-				-1.5
5,561,562	+				-2.1
5,561,562	+				+1.3
5,561,562	+				-0.4
5,561,562	+				-0.1
5,561,562	+				+0.3
5,561,562	+				-1.0
5,561,562	+				-1.2
5,561,562	+				+1.1
5,561,562	+				-2.4
5,561,563	-				+0.5
5,561,563	-				+0.6
5,561,564	+				+0.2
5,561,564	+				-0.4
5,561,564	+				+0.7
5,561,564	+				+1.0
5,561,564	+				+1.0
5,561,564	+				-0.3
5,561,564	+				-0.1
5,561,564	+				+0.4
5,561,564	+				+1.0
5,561,564	+				+0.8
5,561,564	+				-0.3
5,561,564	+				+0.0
5,561,564	+				+0.4
5,561,564	+				+0.4
5,561,564	+				-0.0
5,561,565	-				+0.5
5,561,565	-				+0.7
5,561,565	-				-0.5
5,561,565	-				-0.9
5,561,565	-				+1.1
5,561,565	-				-1.4
5,561,565	-				-0.7
5,561,565	-				-0.4
5,561,565	-				+1.3
5,561,565	-				-0.1
5,561,565	-				-0.7
5,561,565	-				+0.8
5,561,705	+				+0.6
5,561,706	-				+0.3
5,561,706	-				+0.4
5,561,754	+		Pf6N2E2_4810	0.16	+0.3
5,561,982	+		Pf6N2E2_4810	0.50	+1.3
5,561,983	-		Pf6N2E2_4810	0.50	+0.1
5,562,098	+		Pf6N2E2_4810	0.67	-0.1
5,562,126	+		Pf6N2E2_4810	0.71	+0.7
5,562,126	+		Pf6N2E2_4810	0.71	-0.3
5,562,126	+		Pf6N2E2_4810	0.71	+1.0
5,562,126	+		Pf6N2E2_4810	0.71	-0.2
5,562,126	+		Pf6N2E2_4810	0.71	+0.9
5,562,126	+		Pf6N2E2_4810	0.71	+1.8
5,562,126	+		Pf6N2E2_4810	0.71	-1.2
5,562,127	-		Pf6N2E2_4810	0.71	-0.1
5,562,127	-		Pf6N2E2_4810	0.71	+1.7
5,562,127	-		Pf6N2E2_4810	0.71	+1.3
5,562,127	-		Pf6N2E2_4810	0.71	+0.2
5,562,127	-		Pf6N2E2_4810	0.71	-0.6
5,562,321	+				-2.9
5,562,321	+				-0.5
5,562,321	+				-1.0
5,562,321	+				-0.6
5,562,321	+				-0.1
5,562,321	+				-0.1
5,562,321	+				+0.5
5,562,321	+				-0.8
5,562,321	+				+1.3
5,562,322	-				-2.0
5,562,322	-				-0.0
5,562,322	-				+0.1
5,562,322	-				-1.5
5,562,322	-				+0.3
5,562,322	-				-0.5
5,562,322	-				-0.0
5,562,322	-				-0.1
5,562,402	-				-0.4
5,562,404	+				+1.5
5,562,428	+				-1.5
5,562,659	+		Pf6N2E2_4811	0.34	+0.2
5,562,659	+		Pf6N2E2_4811	0.34	-0.3
5,562,659	+		Pf6N2E2_4811	0.34	-1.9
5,562,660	-		Pf6N2E2_4811	0.35	-0.7
5,562,660	-		Pf6N2E2_4811	0.35	-1.5
5,562,880	+		Pf6N2E2_4811	0.68	-1.4
5,562,880	+		Pf6N2E2_4811	0.68	-1.4
5,562,880	+		Pf6N2E2_4811	0.68	-0.5
5,562,881	-		Pf6N2E2_4811	0.68	+2.3
5,562,881	-		Pf6N2E2_4811	0.68	+0.1
5,563,158	+				-0.8
5,563,158	+				+0.0
5,563,158	+				+0.2
5,563,158	+				+0.3
5,563,158	+				+0.0
5,563,159	-				+0.1
5,563,159	-				-0.3
5,563,159	-				-1.6
5,563,263	+				-1.0
5,563,264	-				+0.9
5,563,264	-				+0.1
5,563,440	+		Pf6N2E2_4812	0.18	+0.1
5,563,440	+		Pf6N2E2_4812	0.18	-0.2
5,563,440	+		Pf6N2E2_4812	0.18	-0.6
5,563,441	-		Pf6N2E2_4812	0.18	+1.3
5,563,441	-		Pf6N2E2_4812	0.18	+0.2
5,563,441	-		Pf6N2E2_4812	0.18	-0.8
5,563,569	+		Pf6N2E2_4812	0.31	+0.6
5,563,570	-		Pf6N2E2_4812	0.31	+0.9
5,563,833	-		Pf6N2E2_4812	0.58	+0.2
5,563,833	-		Pf6N2E2_4812	0.58	-0.2
5,563,862	+		Pf6N2E2_4812	0.60	-0.6
5,563,862	+		Pf6N2E2_4812	0.60	-0.6
5,563,862	+		Pf6N2E2_4812	0.60	-1.9
5,563,863	-		Pf6N2E2_4812	0.61	+1.3
5,563,863	-		Pf6N2E2_4812	0.61	+0.7
5,563,863	-		Pf6N2E2_4812	0.61	+0.1
5,563,863	-		Pf6N2E2_4812	0.61	-1.6
5,563,879	+		Pf6N2E2_4812	0.62	+0.9
5,563,879	+		Pf6N2E2_4812	0.62	-0.0
5,563,880	-		Pf6N2E2_4812	0.62	+0.4
5,563,880	-		Pf6N2E2_4812	0.62	-1.7
5,563,931	-		Pf6N2E2_4812	0.67	-0.7
5,563,970	+		Pf6N2E2_4812	0.71	-0.4
5,563,971	-		Pf6N2E2_4812	0.71	-0.2
5,563,971	-		Pf6N2E2_4812	0.71	-0.1
5,563,971	-		Pf6N2E2_4812	0.71	-0.6
5,563,971	-		Pf6N2E2_4812	0.71	+0.1
5,564,045	+		Pf6N2E2_4812	0.79	+1.3
5,564,045	+		Pf6N2E2_4812	0.79	+0.6
5,564,046	-		Pf6N2E2_4812	0.79	-0.3
5,564,046	-		Pf6N2E2_4812	0.79	+1.1
5,564,046	-		Pf6N2E2_4812	0.79	+0.1