Experiment: sodium iodate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_445 and Pf6N2E2_446 are separated by 200 nucleotides Pf6N2E2_446 and Pf6N2E2_447 are separated by 174 nucleotides Pf6N2E2_447 and Pf6N2E2_448 are separated by 124 nucleotides
Pf6N2E2_445 - UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9), at 507,127 to 507,966
_445
Pf6N2E2_446 - Glutathione reductase (EC 1.8.1.7), at 508,167 to 509,525
_446
Pf6N2E2_447 - Alkyl hydroperoxide reductase protein C (EC 1.6.4.-), at 509,700 to 510,263
_447
Pf6N2E2_448 - Alkyl hydroperoxide reductase protein F (EC 1.6.4.-), at 510,388 to 511,950
_448
Position (kb) 508
509
510 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 507.186 kb on + strand at 507.187 kb on - strand at 507.187 kb on - strand at 507.334 kb on + strand, within Pf6N2E2_445 at 507.334 kb on + strand, within Pf6N2E2_445 at 507.335 kb on - strand, within Pf6N2E2_445 at 507.376 kb on + strand, within Pf6N2E2_445 at 507.421 kb on + strand, within Pf6N2E2_445 at 507.548 kb on + strand, within Pf6N2E2_445 at 507.548 kb on + strand, within Pf6N2E2_445 at 507.571 kb on + strand, within Pf6N2E2_445 at 507.571 kb on + strand, within Pf6N2E2_445 at 507.635 kb on - strand, within Pf6N2E2_445 at 507.673 kb on + strand, within Pf6N2E2_445 at 507.673 kb on + strand, within Pf6N2E2_445 at 507.746 kb on - strand, within Pf6N2E2_445 at 507.862 kb on + strand, within Pf6N2E2_445 at 507.862 kb on + strand, within Pf6N2E2_445 at 507.863 kb on - strand, within Pf6N2E2_445 at 507.863 kb on - strand, within Pf6N2E2_445 at 507.907 kb on + strand at 507.908 kb on - strand at 507.908 kb on - strand at 507.943 kb on + strand at 507.943 kb on + strand at 507.943 kb on + strand at 507.943 kb on + strand at 507.944 kb on - strand at 507.944 kb on - strand at 507.944 kb on - strand at 507.961 kb on + strand at 508.137 kb on + strand at 508.138 kb on - strand at 508.138 kb on - strand at 508.138 kb on - strand at 508.138 kb on - strand at 508.138 kb on - strand at 508.162 kb on + strand at 508.162 kb on + strand at 508.162 kb on + strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.188 kb on + strand at 508.189 kb on - strand at 508.189 kb on - strand at 508.189 kb on - strand at 508.189 kb on - strand at 508.189 kb on - strand at 508.217 kb on - strand at 508.329 kb on + strand, within Pf6N2E2_446 at 508.330 kb on - strand, within Pf6N2E2_446 at 508.341 kb on + strand at 508.341 kb on + strand, within Pf6N2E2_446 at 508.371 kb on + strand, within Pf6N2E2_446 at 508.372 kb on - strand, within Pf6N2E2_446 at 508.458 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.750 kb on + strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.751 kb on - strand, within Pf6N2E2_446 at 508.938 kb on + strand, within Pf6N2E2_446 at 508.938 kb on + strand, within Pf6N2E2_446 at 508.938 kb on + strand, within Pf6N2E2_446 at 508.939 kb on - strand, within Pf6N2E2_446 at 509.034 kb on + strand, within Pf6N2E2_446 at 509.375 kb on + strand, within Pf6N2E2_446 at 509.375 kb on + strand, within Pf6N2E2_446 at 509.507 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.540 kb on + strand at 509.541 kb on - strand at 509.541 kb on - strand at 509.541 kb on - strand at 509.541 kb on - strand at 509.580 kb on - strand at 509.583 kb on + strand at 509.584 kb on - strand at 509.656 kb on + strand at 509.656 kb on + strand at 509.656 kb on + strand at 509.706 kb on - strand at 509.706 kb on - strand at 509.706 kb on - strand at 509.724 kb on - strand at 509.814 kb on + strand, within Pf6N2E2_447 at 509.814 kb on + strand, within Pf6N2E2_447 at 509.904 kb on + strand, within Pf6N2E2_447 at 509.905 kb on - strand, within Pf6N2E2_447 at 509.905 kb on - strand, within Pf6N2E2_447 at 509.979 kb on + strand, within Pf6N2E2_447 at 509.980 kb on - strand, within Pf6N2E2_447 at 509.980 kb on - strand, within Pf6N2E2_447 at 509.980 kb on - strand, within Pf6N2E2_447 at 510.169 kb on - strand, within Pf6N2E2_447 at 510.169 kb on - strand, within Pf6N2E2_447 at 510.169 kb on - strand, within Pf6N2E2_447 at 510.261 kb on + strand at 510.261 kb on + strand at 510.262 kb on - strand at 510.262 kb on - strand at 510.262 kb on - strand at 510.262 kb on - strand at 510.262 kb on - strand at 510.262 kb on - strand at 510.262 kb on - strand at 510.298 kb on + strand at 510.298 kb on + strand at 510.298 kb on + strand at 510.298 kb on + strand at 510.299 kb on - strand at 510.299 kb on - strand at 510.299 kb on - strand at 510.299 kb on - strand at 510.299 kb on - strand at 510.299 kb on - strand at 510.299 kb on - strand at 510.387 kb on + strand at 510.388 kb on - strand at 510.388 kb on - strand at 510.405 kb on + strand at 510.405 kb on + strand at 510.424 kb on + strand at 510.504 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium iodate 0.005 M remove 507,186 + -1.4 507,187 - -0.6 507,187 - -0.6 507,334 + Pf6N2E2_445 0.25 +0.4 507,334 + Pf6N2E2_445 0.25 -0.9 507,335 - Pf6N2E2_445 0.25 -0.6 507,376 + Pf6N2E2_445 0.30 +0.5 507,421 + Pf6N2E2_445 0.35 -0.9 507,548 + Pf6N2E2_445 0.50 -0.6 507,548 + Pf6N2E2_445 0.50 -1.8 507,571 + Pf6N2E2_445 0.53 -1.2 507,571 + Pf6N2E2_445 0.53 -1.5 507,635 - Pf6N2E2_445 0.60 -0.6 507,673 + Pf6N2E2_445 0.65 -1.6 507,673 + Pf6N2E2_445 0.65 -2.3 507,746 - Pf6N2E2_445 0.74 -0.2 507,862 + Pf6N2E2_445 0.88 +1.1 507,862 + Pf6N2E2_445 0.88 -2.5 507,863 - Pf6N2E2_445 0.88 -0.4 507,863 - Pf6N2E2_445 0.88 -1.5 507,907 + -1.2 507,908 - -2.1 507,908 - +0.9 507,943 + +1.1 507,943 + -0.5 507,943 + +0.4 507,943 + -0.1 507,944 - +0.7 507,944 - +2.5 507,944 - +1.9 507,961 + -0.2 508,137 + +0.3 508,138 - -1.1 508,138 - +1.4 508,138 - -1.0 508,138 - +0.1 508,138 - +0.2 508,162 + -0.3 508,162 + -1.9 508,162 + -0.1 508,163 - +0.0 508,163 - -1.5 508,188 + -0.8 508,188 + -2.4 508,188 + +0.1 508,188 + -1.1 508,188 + -2.2 508,188 + -0.5 508,188 + -2.6 508,188 + -1.6 508,188 + -1.3 508,188 + -1.9 508,188 + -1.4 508,188 + -1.8 508,189 - -2.3 508,189 - -0.1 508,189 - +0.1 508,189 - -1.3 508,189 - -2.4 508,217 - -2.6 508,329 + Pf6N2E2_446 0.12 +1.9 508,330 - Pf6N2E2_446 0.12 +0.7 508,341 + +1.9 508,341 + Pf6N2E2_446 0.13 -2.2 508,371 + Pf6N2E2_446 0.15 -0.1 508,372 - Pf6N2E2_446 0.15 -2.2 508,458 + Pf6N2E2_446 0.21 -2.8 508,750 + Pf6N2E2_446 0.43 -0.1 508,750 + Pf6N2E2_446 0.43 -0.5 508,750 + Pf6N2E2_446 0.43 -2.1 508,750 + Pf6N2E2_446 0.43 -1.7 508,750 + Pf6N2E2_446 0.43 -1.2 508,750 + Pf6N2E2_446 0.43 -1.5 508,750 + Pf6N2E2_446 0.43 +0.1 508,750 + Pf6N2E2_446 0.43 -0.8 508,750 + Pf6N2E2_446 0.43 -0.5 508,750 + Pf6N2E2_446 0.43 -1.4 508,750 + Pf6N2E2_446 0.43 -1.1 508,751 - Pf6N2E2_446 0.43 -0.4 508,751 - Pf6N2E2_446 0.43 -0.1 508,751 - Pf6N2E2_446 0.43 +1.2 508,751 - Pf6N2E2_446 0.43 -1.3 508,751 - Pf6N2E2_446 0.43 -1.2 508,751 - Pf6N2E2_446 0.43 -0.1 508,751 - Pf6N2E2_446 0.43 -2.1 508,938 + Pf6N2E2_446 0.57 -2.6 508,938 + Pf6N2E2_446 0.57 -1.2 508,938 + Pf6N2E2_446 0.57 -0.6 508,939 - Pf6N2E2_446 0.57 +0.9 509,034 + Pf6N2E2_446 0.64 -1.4 509,375 + Pf6N2E2_446 0.89 +0.4 509,375 + Pf6N2E2_446 0.89 -2.1 509,507 + -0.1 509,540 + -1.1 509,540 + +0.4 509,540 + -1.2 509,540 + -1.0 509,540 + +0.1 509,540 + -0.2 509,540 + -0.5 509,540 + +0.5 509,541 - -0.9 509,541 - +0.2 509,541 - -0.5 509,541 - +1.9 509,580 - -1.1 509,583 + -0.1 509,584 - +0.1 509,656 + +1.5 509,656 + -0.6 509,656 + -0.9 509,706 - -1.2 509,706 - -0.4 509,706 - -0.9 509,724 - -0.4 509,814 + Pf6N2E2_447 0.20 -0.1 509,814 + Pf6N2E2_447 0.20 +0.9 509,904 + Pf6N2E2_447 0.36 +0.8 509,905 - Pf6N2E2_447 0.36 -0.2 509,905 - Pf6N2E2_447 0.36 +0.1 509,979 + Pf6N2E2_447 0.49 +0.9 509,980 - Pf6N2E2_447 0.50 -0.1 509,980 - Pf6N2E2_447 0.50 +2.9 509,980 - Pf6N2E2_447 0.50 -0.1 510,169 - Pf6N2E2_447 0.83 -0.4 510,169 - Pf6N2E2_447 0.83 +0.5 510,169 - Pf6N2E2_447 0.83 -0.8 510,261 + +0.9 510,261 + +0.3 510,262 - +0.1 510,262 - +0.4 510,262 - +1.1 510,262 - -0.9 510,262 - +0.1 510,262 - +0.5 510,262 - -1.1 510,298 + +0.6 510,298 + +0.9 510,298 + +0.2 510,298 + -1.5 510,299 - +0.2 510,299 - +0.9 510,299 - +0.6 510,299 - -1.4 510,299 - +0.4 510,299 - -0.2 510,299 - -0.8 510,387 + -0.1 510,388 - +1.0 510,388 - -0.8 510,405 + +1.1 510,405 + +0.1 510,424 + -1.6 510,504 - -0.6
Or see this region's nucleotide sequence