Experiment: sodium iodate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_381 and Pf6N2E2_382 are separated by 249 nucleotides
Pf6N2E2_381 - hypothetical protein, at 447,554 to 448,942
_381
Pf6N2E2_382 - RNA:NAD 2'-phosphotransferase, at 449,192 to 449,776
_382
Position (kb) 449
450 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 448.201 kb on + strand, within Pf6N2E2_381 at 448.201 kb on + strand, within Pf6N2E2_381 at 448.202 kb on - strand, within Pf6N2E2_381 at 448.356 kb on + strand, within Pf6N2E2_381 at 448.356 kb on + strand, within Pf6N2E2_381 at 448.357 kb on - strand, within Pf6N2E2_381 at 448.357 kb on - strand, within Pf6N2E2_381 at 448.360 kb on - strand, within Pf6N2E2_381 at 448.404 kb on + strand, within Pf6N2E2_381 at 448.404 kb on + strand, within Pf6N2E2_381 at 448.404 kb on + strand, within Pf6N2E2_381 at 448.405 kb on - strand, within Pf6N2E2_381 at 448.470 kb on + strand, within Pf6N2E2_381 at 448.588 kb on + strand, within Pf6N2E2_381 at 448.589 kb on - strand, within Pf6N2E2_381 at 448.683 kb on + strand, within Pf6N2E2_381 at 448.708 kb on - strand, within Pf6N2E2_381 at 448.708 kb on - strand, within Pf6N2E2_381 at 448.769 kb on + strand, within Pf6N2E2_381 at 448.769 kb on + strand, within Pf6N2E2_381 at 448.769 kb on + strand, within Pf6N2E2_381 at 448.769 kb on + strand, within Pf6N2E2_381 at 448.769 kb on + strand, within Pf6N2E2_381 at 448.770 kb on - strand, within Pf6N2E2_381 at 448.770 kb on - strand, within Pf6N2E2_381 at 448.956 kb on - strand at 449.004 kb on + strand at 449.004 kb on + strand at 449.009 kb on + strand at 449.009 kb on + strand at 449.176 kb on + strand at 449.177 kb on - strand at 449.177 kb on - strand at 449.177 kb on - strand at 449.177 kb on - strand at 449.177 kb on - strand at 449.178 kb on + strand at 449.197 kb on + strand at 449.197 kb on + strand at 449.198 kb on - strand at 449.206 kb on + strand at 449.206 kb on + strand at 449.207 kb on - strand at 449.214 kb on - strand at 449.226 kb on + strand at 449.226 kb on + strand at 449.227 kb on - strand at 449.227 kb on - strand at 449.306 kb on + strand, within Pf6N2E2_382 at 449.307 kb on - strand, within Pf6N2E2_382 at 449.307 kb on - strand, within Pf6N2E2_382 at 449.337 kb on + strand, within Pf6N2E2_382 at 449.457 kb on + strand, within Pf6N2E2_382 at 449.457 kb on + strand, within Pf6N2E2_382 at 449.457 kb on + strand, within Pf6N2E2_382 at 449.457 kb on + strand, within Pf6N2E2_382 at 449.458 kb on - strand, within Pf6N2E2_382 at 449.458 kb on - strand, within Pf6N2E2_382 at 449.458 kb on - strand, within Pf6N2E2_382 at 449.458 kb on - strand, within Pf6N2E2_382 at 449.604 kb on + strand, within Pf6N2E2_382 at 449.614 kb on + strand, within Pf6N2E2_382 at 449.615 kb on - strand, within Pf6N2E2_382 at 449.647 kb on + strand, within Pf6N2E2_382 at 449.648 kb on - strand, within Pf6N2E2_382 at 449.682 kb on - strand, within Pf6N2E2_382 at 449.682 kb on - strand, within Pf6N2E2_382 at 449.708 kb on + strand, within Pf6N2E2_382 at 449.709 kb on - strand, within Pf6N2E2_382 at 449.711 kb on + strand, within Pf6N2E2_382 at 449.711 kb on + strand at 449.711 kb on + strand, within Pf6N2E2_382 at 449.711 kb on + strand, within Pf6N2E2_382 at 449.711 kb on + strand, within Pf6N2E2_382 at 449.712 kb on - strand, within Pf6N2E2_382 at 449.712 kb on - strand, within Pf6N2E2_382 at 449.715 kb on + strand, within Pf6N2E2_382 at 449.715 kb on + strand, within Pf6N2E2_382 at 449.715 kb on + strand, within Pf6N2E2_382 at 449.716 kb on - strand, within Pf6N2E2_382 at 449.791 kb on + strand at 449.791 kb on + strand at 449.792 kb on - strand at 449.792 kb on - strand at 449.792 kb on - strand at 449.794 kb on + strand at 449.794 kb on + strand at 449.795 kb on - strand at 449.795 kb on - strand at 449.795 kb on - strand at 449.809 kb on + strand at 449.809 kb on + strand at 449.810 kb on - strand at 449.810 kb on - strand at 449.810 kb on - strand at 449.879 kb on + strand at 450.008 kb on - strand at 450.008 kb on - strand at 450.008 kb on - strand at 450.008 kb on - strand at 450.010 kb on + strand at 450.011 kb on - strand at 450.011 kb on - strand at 450.052 kb on + strand at 450.053 kb on - strand at 450.053 kb on - strand at 450.222 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.271 kb on - strand at 450.271 kb on - strand at 450.271 kb on - strand at 450.271 kb on - strand at 450.307 kb on + strand at 450.307 kb on + strand at 450.308 kb on - strand at 450.370 kb on + strand at 450.402 kb on + strand at 450.402 kb on + strand at 450.402 kb on + strand at 450.402 kb on + strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.405 kb on - strand at 450.405 kb on - strand at 450.405 kb on - strand at 450.405 kb on - strand at 450.438 kb on + strand at 450.438 kb on + strand at 450.438 kb on + strand at 450.439 kb on - strand at 450.757 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium iodate 0.005 M remove 448,201 + Pf6N2E2_381 0.47 +0.7 448,201 + Pf6N2E2_381 0.47 +1.4 448,202 - Pf6N2E2_381 0.47 -0.2 448,356 + Pf6N2E2_381 0.58 -0.5 448,356 + Pf6N2E2_381 0.58 +0.7 448,357 - Pf6N2E2_381 0.58 +1.4 448,357 - Pf6N2E2_381 0.58 -1.0 448,360 - Pf6N2E2_381 0.58 +3.6 448,404 + Pf6N2E2_381 0.61 -0.3 448,404 + Pf6N2E2_381 0.61 +0.4 448,404 + Pf6N2E2_381 0.61 +0.2 448,405 - Pf6N2E2_381 0.61 -0.1 448,470 + Pf6N2E2_381 0.66 +0.4 448,588 + Pf6N2E2_381 0.74 +0.7 448,589 - Pf6N2E2_381 0.75 -0.7 448,683 + Pf6N2E2_381 0.81 +0.7 448,708 - Pf6N2E2_381 0.83 +1.2 448,708 - Pf6N2E2_381 0.83 +0.4 448,769 + Pf6N2E2_381 0.87 -0.6 448,769 + Pf6N2E2_381 0.87 -1.2 448,769 + Pf6N2E2_381 0.87 -0.5 448,769 + Pf6N2E2_381 0.87 +0.4 448,769 + Pf6N2E2_381 0.87 +1.2 448,770 - Pf6N2E2_381 0.88 -0.1 448,770 - Pf6N2E2_381 0.88 +0.4 448,956 - -0.3 449,004 + +0.3 449,004 + +1.6 449,009 + -0.0 449,009 + +0.8 449,176 + -0.5 449,177 - +1.3 449,177 - +2.0 449,177 - -1.5 449,177 - -0.3 449,177 - -1.6 449,178 + +1.2 449,197 + -0.1 449,197 + -0.2 449,198 - +0.3 449,206 + +1.2 449,206 + +0.8 449,207 - -0.6 449,214 - +1.8 449,226 + -1.8 449,226 + +0.6 449,227 - +0.5 449,227 - -0.5 449,306 + Pf6N2E2_382 0.19 -0.6 449,307 - Pf6N2E2_382 0.20 -1.4 449,307 - Pf6N2E2_382 0.20 +0.9 449,337 + Pf6N2E2_382 0.25 -0.7 449,457 + Pf6N2E2_382 0.45 +0.6 449,457 + Pf6N2E2_382 0.45 -0.3 449,457 + Pf6N2E2_382 0.45 -0.5 449,457 + Pf6N2E2_382 0.45 +0.9 449,458 - Pf6N2E2_382 0.45 +0.5 449,458 - Pf6N2E2_382 0.45 -0.7 449,458 - Pf6N2E2_382 0.45 +0.8 449,458 - Pf6N2E2_382 0.45 -1.3 449,604 + Pf6N2E2_382 0.70 +0.7 449,614 + Pf6N2E2_382 0.72 +2.7 449,615 - Pf6N2E2_382 0.72 -1.2 449,647 + Pf6N2E2_382 0.78 +0.4 449,648 - Pf6N2E2_382 0.78 +0.4 449,682 - Pf6N2E2_382 0.84 -0.8 449,682 - Pf6N2E2_382 0.84 +0.1 449,708 + Pf6N2E2_382 0.88 -0.9 449,709 - Pf6N2E2_382 0.88 -0.8 449,711 + Pf6N2E2_382 0.89 +0.7 449,711 + -0.0 449,711 + Pf6N2E2_382 0.89 +0.3 449,711 + Pf6N2E2_382 0.89 -0.2 449,711 + Pf6N2E2_382 0.89 -0.8 449,712 - Pf6N2E2_382 0.89 -0.8 449,712 - Pf6N2E2_382 0.89 -0.3 449,715 + Pf6N2E2_382 0.89 -0.9 449,715 + Pf6N2E2_382 0.89 -1.6 449,715 + Pf6N2E2_382 0.89 +0.1 449,716 - Pf6N2E2_382 0.90 +0.1 449,791 + -2.2 449,791 + +0.4 449,792 - +0.1 449,792 - +1.0 449,792 - +1.2 449,794 + +0.4 449,794 + +2.0 449,795 - -0.8 449,795 - -0.7 449,795 - +1.0 449,809 + -0.5 449,809 + +1.6 449,810 - +1.0 449,810 - +0.6 449,810 - -1.1 449,879 + -0.0 450,008 - +0.4 450,008 - +1.2 450,008 - -0.5 450,008 - -1.3 450,010 + +0.4 450,011 - -1.9 450,011 - +0.3 450,052 + +0.5 450,053 - -0.8 450,053 - +1.0 450,222 + +0.2 450,270 + +0.4 450,270 + +1.1 450,270 + -0.5 450,270 + +1.2 450,270 + +0.8 450,271 - +0.7 450,271 - -0.1 450,271 - +0.4 450,271 - -0.1 450,307 + +0.3 450,307 + -1.0 450,308 - -0.6 450,370 + -0.3 450,402 + -1.3 450,402 + -1.2 450,402 + -0.0 450,402 + -0.3 450,403 - -1.6 450,403 - -0.9 450,403 - -0.4 450,403 - +1.0 450,403 - -0.7 450,403 - +0.5 450,403 - +1.0 450,403 - -0.6 450,405 - -0.0 450,405 - -1.1 450,405 - -1.6 450,405 - +0.7 450,438 + +0.7 450,438 + +1.4 450,438 + -0.2 450,439 - +0.1 450,757 + -0.2
Or see this region's nucleotide sequence