Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_38

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
76,438	+		Pf6N2E2_36	0.80	-0.6
76,438	+		Pf6N2E2_36	0.80	+0.7
76,438	+		Pf6N2E2_36	0.80	-0.3
76,438	+		Pf6N2E2_36	0.80	+0.3
76,438	+		Pf6N2E2_36	0.80	-1.1
76,438	+		Pf6N2E2_36	0.80	-1.7
76,438	+		Pf6N2E2_36	0.80	+0.2
76,438	+		Pf6N2E2_36	0.80	-0.6
76,439	-		Pf6N2E2_36	0.80	+0.1
76,439	-		Pf6N2E2_36	0.80	+1.0
76,439	-		Pf6N2E2_36	0.80	-0.6
76,439	-		Pf6N2E2_36	0.80	+1.5
76,439	-		Pf6N2E2_36	0.80	+0.1
76,439	-		Pf6N2E2_36	0.80	-0.4
76,439	-		Pf6N2E2_36	0.80	+0.7
76,439	-		Pf6N2E2_36	0.80	-0.2
76,489	+		Pf6N2E2_36	0.86	+0.4
76,489	+		Pf6N2E2_36	0.86	+1.5
76,489	+		Pf6N2E2_36	0.86	-0.9
76,490	-		Pf6N2E2_36	0.86	-0.0
76,490	-		Pf6N2E2_36	0.86	-0.7
76,576	+				-0.1
76,577	-				+2.1
76,577	-				+0.5
76,644	+				+1.1
76,645	-				+0.1
76,645	-				+0.3
76,739	+				+0.9
76,739	+				+1.2
76,740	-				+0.1
76,851	+				+0.1
76,851	+				-0.3
76,852	-				-1.4
76,852	-				-1.0
76,852	-				-2.2
76,852	-				+1.5
76,852	-				-1.1
76,986	+		Pf6N2E2_37	0.41	-1.7
76,986	+		Pf6N2E2_37	0.41	-0.9
76,986	+		Pf6N2E2_37	0.41	+1.3
76,986	+		Pf6N2E2_37	0.41	-1.1
76,987	-		Pf6N2E2_37	0.42	-0.2
76,987	-		Pf6N2E2_37	0.42	-2.1
76,987	-		Pf6N2E2_37	0.42	+0.2
77,007	+		Pf6N2E2_37	0.47	-1.5
77,209	+				-0.8
77,209	+				-0.9
77,210	-				-0.1
77,242	+				+0.9
77,243	-				-0.7
77,280	-				-0.9
77,376	-				-1.2
77,422	-		Pf6N2E2_38	0.13	-0.6
77,459	+		Pf6N2E2_38	0.17	-1.5
77,460	-		Pf6N2E2_38	0.17	+0.6
77,597	+		Pf6N2E2_38	0.30	-0.4
77,598	-		Pf6N2E2_38	0.30	+0.3
77,616	-		Pf6N2E2_38	0.31	-0.2
77,639	+		Pf6N2E2_38	0.33	-0.0
78,065	+		Pf6N2E2_38	0.73	+0.4
78,065	+		Pf6N2E2_38	0.73	-0.9
78,065	+		Pf6N2E2_38	0.73	+0.0
78,065	+		Pf6N2E2_38	0.73	-0.1
78,065	+		Pf6N2E2_38	0.73	-1.6
78,065	+		Pf6N2E2_38	0.73	+0.9
78,065	+		Pf6N2E2_38	0.73	-1.5
78,066	-		Pf6N2E2_38	0.73	-0.7
78,066	-		Pf6N2E2_38	0.73	+0.9
78,066	-		Pf6N2E2_38	0.73	-0.6
78,388	+				-0.0
78,389	-				+1.2
78,389	-				-1.8
78,389	-				-0.5
78,390	+				+0.2
78,391	-				+0.3
78,409	+				+0.1
78,410	-				+1.6
78,410	-				-0.5
78,410	-				-0.8
78,410	-				-1.2
78,482	+				+0.1
78,483	-				+0.1
78,483	-				-1.6
78,484	+				-0.2
78,484	+				-0.2
78,484	+				+0.0
78,485	-				-0.2
78,485	-				+1.8
78,485	-				+0.2
78,485	-				-3.1
78,485	-				-1.3
78,485	-				-1.4
78,485	-				+0.6
78,495	+				+1.7
78,611	+		Pf6N2E2_39	0.36	+0.4
78,708	+		Pf6N2E2_39	0.67	-0.5
78,708	+		Pf6N2E2_39	0.67	+0.9
78,709	-		Pf6N2E2_39	0.67	-0.4
78,709	-		Pf6N2E2_39	0.67	-0.5
78,714	+		Pf6N2E2_39	0.69	-0.2
78,714	+		Pf6N2E2_39	0.69	-0.3
78,715	-		Pf6N2E2_39	0.69	+0.4
78,715	-		Pf6N2E2_39	0.69	-1.0
78,735	-		Pf6N2E2_39	0.76	-0.1
78,804	-				-1.2
78,807	+				-2.6
78,808	-				-1.2
78,808	-				+0.3
78,833	-				-0.9
79,023	-		Pf6N2E2_40	0.69	-1.2
79,023	-		Pf6N2E2_40	0.69	-1.8
79,023	-		Pf6N2E2_40	0.69	-2.8
79,025	-		Pf6N2E2_40	0.69	-2.3
79,025	-		Pf6N2E2_40	0.69	-1.9
79,025	-		Pf6N2E2_40	0.69	-2.9
79,029	-		Pf6N2E2_40	0.71	-3.2
79,099	-				-0.4
79,108	+				-0.6
79,109	-				+0.8
79,230	-		Pf6N2E2_41	0.16	+0.5
79,232	-		Pf6N2E2_41	0.17	-0.6
79,252	+		Pf6N2E2_41	0.20	-1.2
79,253	-		Pf6N2E2_41	0.20	+0.1