Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3298

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
3,804,674	+		Pf6N2E2_3297	0.41	+0.4
3,804,674	+		Pf6N2E2_3297	0.41	+0.0
3,804,675	-		Pf6N2E2_3297	0.41	+0.4
3,804,701	+		Pf6N2E2_3297	0.43	+0.5
3,804,701	+		Pf6N2E2_3297	0.43	-2.7
3,804,702	-		Pf6N2E2_3297	0.43	-0.0
3,804,702	-		Pf6N2E2_3297	0.43	+0.8
3,804,723	-		Pf6N2E2_3297	0.44	+0.4
3,804,734	+		Pf6N2E2_3297	0.45	-1.1
3,804,734	+		Pf6N2E2_3297	0.45	-1.0
3,804,735	-		Pf6N2E2_3297	0.45	-0.5
3,804,776	+		Pf6N2E2_3297	0.48	-0.0
3,804,776	+		Pf6N2E2_3297	0.48	-1.3
3,804,777	-		Pf6N2E2_3297	0.48	+0.0
3,804,777	-		Pf6N2E2_3297	0.48	-0.1
3,804,902	+		Pf6N2E2_3297	0.57	+0.6
3,804,902	+		Pf6N2E2_3297	0.57	-0.4
3,804,902	+		Pf6N2E2_3297	0.57	+1.7
3,804,903	-		Pf6N2E2_3297	0.58	+1.8
3,804,903	-		Pf6N2E2_3297	0.58	+3.6
3,804,903	-		Pf6N2E2_3297	0.58	-0.4
3,805,029	-		Pf6N2E2_3297	0.67	+0.8
3,805,029	-		Pf6N2E2_3297	0.67	-0.2
3,805,196	+		Pf6N2E2_3297	0.79	+1.2
3,805,196	+		Pf6N2E2_3297	0.79	+1.0
3,805,196	+		Pf6N2E2_3297	0.79	+0.4
3,805,197	-		Pf6N2E2_3297	0.79	-1.9
3,805,197	-		Pf6N2E2_3297	0.79	+0.0
3,805,197	-		Pf6N2E2_3297	0.79	+1.3
3,805,244	+		Pf6N2E2_3297	0.82	-0.7
3,805,305	-		Pf6N2E2_3297	0.87	+1.3
3,805,329	+		Pf6N2E2_3297	0.89	+0.8
3,805,329	+		Pf6N2E2_3297	0.89	+1.4
3,805,329	+		Pf6N2E2_3297	0.89	-0.3
3,805,329	+		Pf6N2E2_3297	0.89	-1.1
3,805,329	+		Pf6N2E2_3297	0.89	+1.3
3,805,329	+		Pf6N2E2_3297	0.89	+1.2
3,805,330	-		Pf6N2E2_3297	0.89	-1.2
3,805,330	-		Pf6N2E2_3297	0.89	+1.1
3,805,330	-		Pf6N2E2_3297	0.89	-0.8
3,805,330	-		Pf6N2E2_3297	0.89	-1.4
3,805,330	-		Pf6N2E2_3297	0.89	-0.4
3,805,330	-		Pf6N2E2_3297	0.89	-0.2
3,805,331	+		Pf6N2E2_3297	0.89	+0.0
3,805,331	+		Pf6N2E2_3297	0.89	+0.6
3,805,331	+		Pf6N2E2_3297	0.89	+0.3
3,805,331	+		Pf6N2E2_3297	0.89	+0.1
3,805,331	+		Pf6N2E2_3297	0.89	-0.2
3,805,332	-		Pf6N2E2_3297	0.89	-1.1
3,805,409	+				-0.4
3,805,409	+				+0.7
3,805,409	+				-0.1
3,805,409	+				-0.4
3,805,409	+				-0.3
3,805,409	+				+1.8
3,805,484	+				-1.6
3,805,484	+				-0.6
3,805,484	+				+0.1
3,805,484	+				-0.4
3,805,484	+				+0.0
3,805,484	+				-0.6
3,805,484	+				+0.2
3,805,484	+				+1.6
3,805,485	-				+0.7
3,805,490	+				+0.6
3,805,490	+				-0.9
3,805,490	+				+1.0
3,805,491	-				-0.2
3,805,491	-				+0.8
3,805,499	+				-1.9
3,805,500	-				+1.9
3,805,504	-				+1.3
3,805,504	-				-0.0
3,805,510	-				-1.5
3,805,569	+				-1.4
3,805,569	+				+0.6
3,805,570	-				-0.1
3,805,570	-				+0.6
3,805,570	-				-0.8
3,805,570	-				+1.0
3,805,570	-				+0.1
3,805,570	-				+1.5
3,805,581	+				-0.7
3,805,581	+				-0.3
3,805,582	-				+0.0
3,805,582	-				+0.7
3,805,582	-				-0.4
3,805,591	+				-0.1
3,805,602	+				-0.9
3,805,602	+				-0.1
3,805,603	-				+0.8
3,805,603	-				-0.0
3,805,603	-				+0.3
3,805,641	+				-0.2
3,805,641	+				-0.9
3,805,642	-				-0.6
3,805,678	-				-0.1
3,805,678	-				+1.3
3,805,750	-		Pf6N2E2_3298	0.13	-0.7
3,805,765	+		Pf6N2E2_3298	0.14	-1.8
3,805,824	+		Pf6N2E2_3298	0.18	+1.5
3,805,825	-		Pf6N2E2_3298	0.18	+0.8
3,805,927	-		Pf6N2E2_3298	0.25	-0.6
3,805,927	-		Pf6N2E2_3298	0.25	+0.7
3,806,001	+		Pf6N2E2_3298	0.30	+0.6
3,806,001	+		Pf6N2E2_3298	0.30	+1.0
3,806,001	+		Pf6N2E2_3298	0.30	+1.5
3,806,002	-		Pf6N2E2_3298	0.30	+0.8
3,806,640	+		Pf6N2E2_3298	0.74	-2.2
3,806,985	+				-0.6
3,806,985	+				+0.7
3,806,985	+				-1.8
3,806,985	+				+1.7
3,806,985	+				-0.5
3,806,985	+				-1.1
3,806,985	+				+0.6
3,806,985	+				-0.1
3,806,985	+				-0.1
3,806,985	+				-0.1
3,806,985	+				+0.4
3,806,985	+				-1.2
3,806,985	+				-0.4
3,806,986	-				+0.5
3,806,986	-				+0.5
3,806,986	-				-0.4
3,806,986	-				-0.3
3,806,986	-				+0.3
3,806,986	-				-0.2
3,806,986	-				+0.8
3,806,986	-				-0.1
3,806,986	-				-0.1
3,806,986	-				+0.6
3,806,986	-				+0.2
3,806,986	-				-0.6
3,807,026	+				+0.7
3,807,027	-				-1.6
3,807,027	-				-0.2
3,807,042	+				-1.7
3,807,043	-				+2.1
3,807,043	-				+0.2
3,807,043	-				-0.6
3,807,043	-				-0.2
3,807,105	+				+0.7
3,807,166	-				-0.9
3,807,208	+				-0.3
3,807,209	-				+0.7
3,807,250	+				-0.5
3,807,250	+				+0.7
3,807,250	+				-1.7
3,807,250	+				+0.2
3,807,251	-				+0.8
3,807,251	-				+1.3
3,807,373	+		Pf6N2E2_3299	0.18	+2.0
3,807,374	-		Pf6N2E2_3299	0.18	-0.6
3,807,439	+		Pf6N2E2_3299	0.25	-0.8
3,807,487	+		Pf6N2E2_3299	0.31	+1.1
3,807,488	-		Pf6N2E2_3299	0.31	+0.8
3,807,512	-		Pf6N2E2_3299	0.33	-2.0
3,807,553	+		Pf6N2E2_3299	0.38	+0.7
3,807,554	-		Pf6N2E2_3299	0.38	+0.1
3,807,697	+		Pf6N2E2_3299	0.54	+2.6
3,807,698	-		Pf6N2E2_3299	0.54	+0.3
3,807,779	-		Pf6N2E2_3299	0.63	+0.0
3,807,779	-		Pf6N2E2_3299	0.63	-1.3
3,807,832	+		Pf6N2E2_3299	0.69	-0.4
3,807,833	-		Pf6N2E2_3299	0.69	+0.0
3,807,833	-		Pf6N2E2_3299	0.69	-2.8
3,807,925	+		Pf6N2E2_3299	0.79	-0.6
3,807,992	-		Pf6N2E2_3299	0.86	-0.2