Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3154

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
3,646,583	+		Pf6N2E2_3153	0.48	+1.2
3,646,583	+		Pf6N2E2_3153	0.48	+0.5
3,646,583	+		Pf6N2E2_3153	0.48	+1.2
3,646,583	+		Pf6N2E2_3153	0.48	+0.5
3,646,583	+		Pf6N2E2_3153	0.48	-1.7
3,646,583	+		Pf6N2E2_3153	0.48	-0.2
3,646,583	+		Pf6N2E2_3153	0.48	+0.9
3,646,583	+		Pf6N2E2_3153	0.48	+0.6
3,646,583	+		Pf6N2E2_3153	0.48	+1.0
3,646,584	-		Pf6N2E2_3153	0.48	+0.2
3,646,584	-		Pf6N2E2_3153	0.48	+0.6
3,646,584	-		Pf6N2E2_3153	0.48	+0.2
3,646,584	-		Pf6N2E2_3153	0.48	+0.2
3,646,584	-		Pf6N2E2_3153	0.48	+0.8
3,646,584	-		Pf6N2E2_3153	0.48	-0.4
3,646,587	+		Pf6N2E2_3153	0.48	+0.8
3,646,587	+		Pf6N2E2_3153	0.48	-0.9
3,646,587	+		Pf6N2E2_3153	0.48	+0.2
3,646,587	+		Pf6N2E2_3153	0.48	+0.2
3,646,588	-		Pf6N2E2_3153	0.49	+0.4
3,646,588	-		Pf6N2E2_3153	0.49	+2.0
3,646,588	-		Pf6N2E2_3153	0.49	-0.0
3,646,648	-		Pf6N2E2_3153	0.53	+1.1
3,646,724	+		Pf6N2E2_3153	0.59	-1.0
3,646,736	+		Pf6N2E2_3153	0.60	+1.1
3,646,736	+		Pf6N2E2_3153	0.60	+0.0
3,646,736	+		Pf6N2E2_3153	0.60	-1.3
3,646,737	-		Pf6N2E2_3153	0.60	+0.7
3,646,737	-		Pf6N2E2_3153	0.60	-0.3
3,646,737	-		Pf6N2E2_3153	0.60	+0.9
3,646,737	-		Pf6N2E2_3153	0.60	-0.8
3,646,763	+		Pf6N2E2_3153	0.62	+0.6
3,646,764	-		Pf6N2E2_3153	0.62	+0.4
3,646,771	-		Pf6N2E2_3153	0.62	+0.9
3,646,875	-		Pf6N2E2_3153	0.70	+0.8
3,646,909	-		Pf6N2E2_3153	0.73	-0.2
3,647,067	-		Pf6N2E2_3153	0.85	+0.6
3,647,067	-		Pf6N2E2_3153	0.85	-0.1
3,647,067	-		Pf6N2E2_3153	0.85	+0.9
3,647,087	+		Pf6N2E2_3153	0.87	-0.2
3,647,088	-		Pf6N2E2_3153	0.87	+0.2
3,647,166	-				-0.4
3,647,166	-				+0.2
3,647,181	+				+0.3
3,647,181	+				+0.3
3,647,182	-				+0.4
3,647,182	-				+0.6
3,647,182	-				-1.2
3,647,383	+				-0.6
3,647,384	-				-1.8
3,647,384	-				+1.5
3,647,384	-				-0.7
3,647,384	-				+0.9
3,647,384	-				-1.9
3,647,384	-				+1.4
3,647,384	-				-0.3
3,647,384	-				+1.2
3,647,384	-				+0.3
3,647,450	+				-1.3
3,647,531	+				-0.7
3,647,531	+				-0.9
3,647,531	+				+0.0
3,647,531	+				-0.3
3,647,531	+				+0.5
3,647,531	+				-0.3
3,647,532	-				-0.4
3,647,532	-				-0.1
3,647,532	-				+0.3
3,647,532	-				+0.9
3,647,532	-				-1.0
3,647,834	+		Pf6N2E2_3154	0.17	-0.1
3,647,834	+		Pf6N2E2_3154	0.17	-0.7
3,647,835	-		Pf6N2E2_3154	0.17	+0.2
3,647,948	+		Pf6N2E2_3154	0.22	+1.0
3,647,969	+		Pf6N2E2_3154	0.23	+2.5
3,647,969	+		Pf6N2E2_3154	0.23	-1.4
3,647,970	-		Pf6N2E2_3154	0.23	+0.3
3,647,970	-		Pf6N2E2_3154	0.23	-1.5
3,647,970	-		Pf6N2E2_3154	0.23	+0.3
3,647,970	-		Pf6N2E2_3154	0.23	-1.2
3,648,377	+		Pf6N2E2_3154	0.40	-1.5
3,648,377	+		Pf6N2E2_3154	0.40	-1.7
3,648,378	-		Pf6N2E2_3154	0.40	-0.6
3,648,378	-		Pf6N2E2_3154	0.40	-0.2
3,648,395	+		Pf6N2E2_3154	0.41	-1.3
3,648,395	+		Pf6N2E2_3154	0.41	-1.6
3,648,395	+		Pf6N2E2_3154	0.41	+0.7
3,648,431	+		Pf6N2E2_3154	0.42	+1.5
3,648,542	+		Pf6N2E2_3154	0.47	+1.3
3,648,542	+		Pf6N2E2_3154	0.47	-0.6
3,648,543	-		Pf6N2E2_3154	0.47	+1.1
3,648,543	-		Pf6N2E2_3154	0.47	-0.7
3,648,543	-		Pf6N2E2_3154	0.47	-2.7
3,648,543	-		Pf6N2E2_3154	0.47	-0.6
3,648,707	+		Pf6N2E2_3154	0.54	-0.2
3,648,707	+		Pf6N2E2_3154	0.54	+0.2
3,648,708	-		Pf6N2E2_3154	0.54	-1.4
3,648,708	-		Pf6N2E2_3154	0.54	+0.0
3,648,708	-		Pf6N2E2_3154	0.54	-0.4
3,648,809	+		Pf6N2E2_3154	0.58	+0.1
3,648,809	+		Pf6N2E2_3154	0.58	-2.0
3,648,809	+		Pf6N2E2_3154	0.58	-0.2
3,648,882	-		Pf6N2E2_3154	0.61	+0.5
3,648,913	-		Pf6N2E2_3154	0.62	+0.2
3,649,085	-		Pf6N2E2_3154	0.69	-0.7
3,649,122	-		Pf6N2E2_3154	0.71	-0.7
3,649,122	-		Pf6N2E2_3154	0.71	-1.7
3,649,442	+		Pf6N2E2_3154	0.84	+0.4
3,649,442	+		Pf6N2E2_3154	0.84	-0.9
3,649,442	+		Pf6N2E2_3154	0.84	-2.1
3,649,443	-		Pf6N2E2_3154	0.84	-0.1
3,649,443	-		Pf6N2E2_3154	0.84	-0.2
3,649,443	-		Pf6N2E2_3154	0.84	-2.1
3,649,443	-		Pf6N2E2_3154	0.84	-0.1
3,649,443	-		Pf6N2E2_3154	0.84	-0.4
3,649,443	-		Pf6N2E2_3154	0.84	+1.0
3,649,761	-				-0.6
3,649,761	-				+0.8
3,649,838	-				+0.7
3,649,987	+				-0.5
3,649,988	-				+1.1
3,649,988	-				-1.4
3,650,040	+				+1.0
3,650,040	+				-0.3
3,650,040	+				-0.0
3,650,040	+				+1.0
3,650,040	+				+0.5
3,650,040	+				-0.4
3,650,040	+				+0.6
3,650,041	-				+0.0
3,650,041	-				+0.7
3,650,041	-				+0.7
3,650,041	-				+0.3
3,650,041	-				-0.7
3,650,041	-				+0.7
3,650,075	+				+0.3
3,650,240	+		Pf6N2E2_3155	0.51	+0.2
3,650,241	-		Pf6N2E2_3155	0.51	-0.9
3,650,241	-		Pf6N2E2_3155	0.51	+1.3
3,650,241	-		Pf6N2E2_3155	0.51	+0.8
3,650,241	-		Pf6N2E2_3155	0.51	-1.7
3,650,365	+		Pf6N2E2_3155	0.82	+0.1
3,650,365	+		Pf6N2E2_3155	0.82	-1.0
3,650,366	-		Pf6N2E2_3155	0.83	-0.5
3,650,366	-		Pf6N2E2_3155	0.83	+0.6
3,650,366	-		Pf6N2E2_3155	0.83	-0.3
3,650,475	+				+0.9
3,650,475	+				+0.6
3,650,475	+				+0.8
3,650,475	+				+0.2
3,650,475	+				+0.4
3,650,476	-				-1.7
3,650,476	-				-1.1
3,650,629	+		Pf6N2E2_3156	0.30	+0.6
3,650,630	-		Pf6N2E2_3156	0.30	-0.3
3,650,630	-		Pf6N2E2_3156	0.30	-0.5
3,650,630	-		Pf6N2E2_3156	0.30	+0.2
3,650,630	-		Pf6N2E2_3156	0.30	-1.4
3,650,697	+		Pf6N2E2_3156	0.40	-0.0
3,650,697	+		Pf6N2E2_3156	0.40	+1.2
3,650,710	-		Pf6N2E2_3156	0.42	-0.8
3,650,804	-		Pf6N2E2_3156	0.57	-0.9