Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3087

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
3,572,247	-				-0.5
3,572,343	-		Pf6N2E2_3085	0.32	-0.1
3,572,343	-		Pf6N2E2_3085	0.32	+0.0
3,572,582	-				+1.9
3,572,582	-				+0.4
3,572,659	-				-0.4
3,572,659	-				+2.9
3,572,673	-				+0.4
3,572,731	-				-0.1
3,572,748	+				+0.8
3,572,749	-				-1.0
3,572,976	-				-0.7
3,572,976	-				+0.1
3,572,980	+				+1.0
3,572,980	+				-2.1
3,572,981	-				-0.3
3,572,981	-				-0.5
3,572,982	+				-0.4
3,572,982	+				-0.1
3,572,982	+				+2.1
3,572,982	+				+0.4
3,572,983	-				-0.8
3,572,983	-				+1.0
3,572,983	-				-2.6
3,572,983	-				+1.7
3,573,009	-				-1.4
3,573,066	+				-0.2
3,573,066	+				+0.2
3,573,066	+				+1.1
3,573,066	+				-1.7
3,573,067	-				-0.9
3,573,067	-				-0.6
3,573,067	-				-0.5
3,573,067	-				+0.3
3,573,068	+				-1.3
3,573,068	+				+3.4
3,573,068	+				-0.0
3,573,069	-				-1.4
3,573,069	-				-1.3
3,573,069	-				+1.0
3,573,069	-				-2.1
3,573,069	-				+0.7
3,573,100	-				+1.2
3,573,142	+				-0.7
3,573,169	+				-1.7
3,573,190	+				+0.1
3,573,191	-				-0.2
3,573,245	+				-0.9
3,573,245	+				-0.1
3,573,246	-				-1.0
3,573,246	-				-0.8
3,573,246	-				-2.7
3,573,246	-				-1.9
3,573,320	+				-0.3
3,573,320	+				-0.5
3,573,320	+				-0.8
3,573,320	+				-0.7
3,573,321	-				-0.9
3,573,321	-				-2.5
3,573,321	-				+1.4
3,573,321	-				-1.3
3,573,321	-				-0.7
3,573,321	-				-0.8
3,573,321	-				-1.3
3,573,986	+		Pf6N2E2_3087	0.32	-1.5
3,573,986	+		Pf6N2E2_3087	0.32	+0.4
3,573,986	+		Pf6N2E2_3087	0.32	-0.1
3,573,986	+		Pf6N2E2_3087	0.32	+0.2
3,573,986	+		Pf6N2E2_3087	0.32	-1.0
3,573,987	-		Pf6N2E2_3087	0.32	-1.8
3,573,987	-		Pf6N2E2_3087	0.32	+1.1
3,573,987	-		Pf6N2E2_3087	0.32	-0.6
3,573,987	-		Pf6N2E2_3087	0.32	-0.1
3,574,106	+		Pf6N2E2_3087	0.37	-0.9
3,574,106	+		Pf6N2E2_3087	0.37	-2.2
3,574,106	+		Pf6N2E2_3087	0.37	-1.2
3,574,107	-		Pf6N2E2_3087	0.37	-0.4
3,574,107	-		Pf6N2E2_3087	0.37	-1.0
3,574,107	-		Pf6N2E2_3087	0.37	-1.1
3,574,136	+		Pf6N2E2_3087	0.38	-2.5
3,574,151	+		Pf6N2E2_3087	0.38	-0.5
3,574,151	+		Pf6N2E2_3087	0.38	-1.8
3,574,152	-		Pf6N2E2_3087	0.38	-1.3
3,574,152	-		Pf6N2E2_3087	0.38	+0.6
3,574,287	-		Pf6N2E2_3087	0.44	-0.1
3,574,307	+		Pf6N2E2_3087	0.45	-2.1
3,574,308	-		Pf6N2E2_3087	0.45	-1.2
3,574,308	-		Pf6N2E2_3087	0.45	-0.8
3,574,346	+		Pf6N2E2_3087	0.46	+0.5
3,574,346	+		Pf6N2E2_3087	0.46	-1.2
3,574,346	+		Pf6N2E2_3087	0.46	-2.3
3,574,346	+		Pf6N2E2_3087	0.46	-0.9
3,574,347	-		Pf6N2E2_3087	0.46	-1.7
3,574,469	+		Pf6N2E2_3087	0.51	+1.5
3,574,469	+		Pf6N2E2_3087	0.51	+0.1
3,574,470	-		Pf6N2E2_3087	0.51	-1.9
3,574,470	-		Pf6N2E2_3087	0.51	-2.9
3,574,470	-		Pf6N2E2_3087	0.51	+0.1
3,574,470	-		Pf6N2E2_3087	0.51	-3.0
3,574,505	+		Pf6N2E2_3087	0.53	+0.0
3,574,505	+		Pf6N2E2_3087	0.53	+1.0
3,574,506	-		Pf6N2E2_3087	0.53	-3.0
3,574,857	-		Pf6N2E2_3087	0.67	-0.0
3,574,857	-		Pf6N2E2_3087	0.67	-0.0
3,574,938	+		Pf6N2E2_3087	0.70	-0.4
3,574,938	+		Pf6N2E2_3087	0.70	-1.1
3,574,938	+		Pf6N2E2_3087	0.70	-0.7
3,574,939	-		Pf6N2E2_3087	0.70	-1.8
3,574,939	-		Pf6N2E2_3087	0.70	-0.1
3,574,939	-		Pf6N2E2_3087	0.70	-0.1
3,574,939	-		Pf6N2E2_3087	0.70	-1.6
3,574,939	-		Pf6N2E2_3087	0.70	-1.0
3,574,939	-		Pf6N2E2_3087	0.70	-1.0
3,574,992	-		Pf6N2E2_3087	0.72	-1.9
3,575,013	+		Pf6N2E2_3087	0.73	-0.5
3,575,024	+		Pf6N2E2_3087	0.73	-0.4
3,575,024	+		Pf6N2E2_3087	0.73	-0.7
3,575,024	+		Pf6N2E2_3087	0.73	-0.4
3,575,025	-		Pf6N2E2_3087	0.73	-1.0
3,575,027	+		Pf6N2E2_3087	0.73	-1.2
3,575,028	-		Pf6N2E2_3087	0.74	-0.1
3,575,138	+		Pf6N2E2_3087	0.78	+0.1
3,575,145	-		Pf6N2E2_3087	0.78	-1.8
3,575,258	+		Pf6N2E2_3087	0.83	+0.3
3,575,258	+		Pf6N2E2_3087	0.83	-1.1
3,575,258	+		Pf6N2E2_3087	0.83	-1.7
3,575,259	-		Pf6N2E2_3087	0.83	-1.0
3,575,342	+		Pf6N2E2_3087	0.86	+1.0
3,575,342	+		Pf6N2E2_3087	0.86	+0.8
3,575,342	+		Pf6N2E2_3087	0.86	-0.1
3,575,343	-		Pf6N2E2_3087	0.86	-1.2
3,575,343	-		Pf6N2E2_3087	0.86	-1.4
3,575,520	+				-0.8
3,575,520	+				+0.9
3,575,520	+				-0.4
3,575,521	-				+2.5
3,575,552	+				-0.7
3,575,552	+				-0.3
3,575,552	+				+0.8
3,575,553	-				-2.2
3,575,553	-				-0.6
3,575,553	-				+0.3
3,575,553	-				-1.2
3,575,757	-				-2.4
3,575,807	-				-2.0
3,575,807	-				-0.7
3,575,831	+				+0.4
3,575,832	-				+0.5
3,575,832	-				+0.2
3,575,832	-				-0.0
3,575,832	-				+0.4
3,575,858	+				-1.2
3,575,858	+				+0.3
3,575,858	+				-3.3
3,575,859	-				+0.4
3,576,014	+		Pf6N2E2_3088	0.37	-0.5
3,576,015	-		Pf6N2E2_3088	0.37	+0.5
3,576,262	+				+0.6
3,576,291	+				-0.3
3,576,292	-				+0.0
3,576,378	-		Pf6N2E2_3089	0.13	-0.7
3,576,378	-		Pf6N2E2_3089	0.13	-0.8
3,576,378	-		Pf6N2E2_3089	0.13	-0.2
3,576,445	+		Pf6N2E2_3089	0.28	-1.3
3,576,445	+		Pf6N2E2_3089	0.28	-1.0
3,576,445	+		Pf6N2E2_3089	0.28	-0.1
3,576,446	-		Pf6N2E2_3089	0.29	+0.4
3,576,446	-		Pf6N2E2_3089	0.29	-0.1
3,576,478	-		Pf6N2E2_3089	0.36	-0.3
3,576,589	+		Pf6N2E2_3089	0.62	-0.7
3,576,589	+		Pf6N2E2_3089	0.62	-0.4
3,576,589	+		Pf6N2E2_3089	0.62	+0.5
3,576,589	+		Pf6N2E2_3089	0.62	-0.9
3,576,590	-		Pf6N2E2_3089	0.63	-0.2
3,576,590	-		Pf6N2E2_3089	0.63	+1.0
3,576,590	-		Pf6N2E2_3089	0.63	-0.5
3,576,590	-		Pf6N2E2_3089	0.63	-1.0
3,576,623	-		Pf6N2E2_3089	0.70	+0.4