Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2677

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
3,164,827	-				+0.8
3,164,866	-				+1.3
3,164,932	+				-2.2
3,164,932	+				-1.1
3,164,932	+				-2.1
3,164,942	-				+0.0
3,164,964	-		Pf6N2E2_2676	0.21	+0.2
3,164,964	-		Pf6N2E2_2676	0.21	+0.0
3,165,366	+		Pf6N2E2_2677	0.30	-0.3
3,165,366	+		Pf6N2E2_2677	0.30	+1.8
3,165,408	+		Pf6N2E2_2677	0.33	+1.3
3,165,408	+		Pf6N2E2_2677	0.33	+0.3
3,165,408	+		Pf6N2E2_2677	0.33	-0.2
3,165,408	+		Pf6N2E2_2677	0.33	-0.1
3,165,408	+		Pf6N2E2_2677	0.33	-0.5
3,165,408	+		Pf6N2E2_2677	0.33	+0.4
3,165,435	+		Pf6N2E2_2677	0.35	+0.7
3,165,435	+		Pf6N2E2_2677	0.35	+1.4
3,165,435	+		Pf6N2E2_2677	0.35	+1.8
3,165,435	+		Pf6N2E2_2677	0.35	+0.3
3,165,435	+		Pf6N2E2_2677	0.35	+0.8
3,165,435	+		Pf6N2E2_2677	0.35	+0.8
3,165,435	+		Pf6N2E2_2677	0.35	+1.4
3,165,435	+		Pf6N2E2_2677	0.35	+0.4
3,165,435	+		Pf6N2E2_2677	0.35	-0.1
3,165,435	+		Pf6N2E2_2677	0.35	+1.8
3,165,435	+		Pf6N2E2_2677	0.35	+0.4
3,165,435	+		Pf6N2E2_2677	0.35	+0.5
3,165,436	-		Pf6N2E2_2677	0.35	+1.0
3,165,436	-		Pf6N2E2_2677	0.35	+0.5
3,165,436	-		Pf6N2E2_2677	0.35	+0.5
3,165,436	-		Pf6N2E2_2677	0.35	+0.7
3,165,436	-		Pf6N2E2_2677	0.35	+0.2
3,165,436	-		Pf6N2E2_2677	0.35	+1.1
3,165,436	-		Pf6N2E2_2677	0.35	+1.2
3,165,439	+		Pf6N2E2_2677	0.35	+1.1
3,165,439	+		Pf6N2E2_2677	0.35	+1.0
3,165,440	-		Pf6N2E2_2677	0.35	-0.3
3,165,537	+		Pf6N2E2_2677	0.43	+0.2
3,165,538	-		Pf6N2E2_2677	0.43	+0.9
3,165,538	-		Pf6N2E2_2677	0.43	+2.2
3,165,870	+		Pf6N2E2_2677	0.68	+0.0
3,165,871	-		Pf6N2E2_2677	0.68	+1.2
3,165,982	-		Pf6N2E2_2677	0.77	+0.3
3,165,994	-		Pf6N2E2_2677	0.78	-0.1
3,165,994	-		Pf6N2E2_2677	0.78	+0.9
3,166,084	-		Pf6N2E2_2677	0.85	+0.4
3,166,084	-		Pf6N2E2_2677	0.85	+1.0
3,166,116	+		Pf6N2E2_2677	0.87	-0.7
3,166,116	+		Pf6N2E2_2677	0.87	-0.6
3,166,137	-		Pf6N2E2_2677	0.89	+0.7
3,166,137	-		Pf6N2E2_2677	0.89	-0.5
3,166,146	+		Pf6N2E2_2677	0.90	+0.5
3,166,340	+				+0.6
3,166,341	-				+0.9
3,166,341	-				+0.9
3,166,341	-				-0.8
3,166,341	-				+0.0
3,166,341	-				-2.5
3,166,341	-				+0.1
3,166,724	+		Pf6N2E2_2678	0.39	-0.0
3,166,724	+		Pf6N2E2_2678	0.39	+0.9
3,166,724	+		Pf6N2E2_2678	0.39	-2.0
3,166,787	+		Pf6N2E2_2678	0.46	-0.4
3,166,787	+		Pf6N2E2_2678	0.46	+1.2
3,166,788	-		Pf6N2E2_2678	0.46	+0.4
3,166,788	-		Pf6N2E2_2678	0.46	+0.8
3,166,788	-		Pf6N2E2_2678	0.46	-0.1
3,166,788	-		Pf6N2E2_2678	0.46	+0.5
3,166,788	-		Pf6N2E2_2678	0.46	+0.7
3,166,788	-		Pf6N2E2_2678	0.46	-0.3
3,166,808	+		Pf6N2E2_2678	0.48	-0.4
3,166,808	+		Pf6N2E2_2678	0.48	+0.0
3,166,808	+		Pf6N2E2_2678	0.48	+0.7
3,166,808	+		Pf6N2E2_2678	0.48	+0.9
3,166,809	-		Pf6N2E2_2678	0.48	+1.9
3,166,809	-		Pf6N2E2_2678	0.48	+1.0
3,166,809	-		Pf6N2E2_2678	0.48	+0.7
3,166,809	-		Pf6N2E2_2678	0.48	+0.7
3,167,030	+		Pf6N2E2_2678	0.74	-0.8
3,167,030	+		Pf6N2E2_2678	0.74	+1.3
3,167,031	-		Pf6N2E2_2678	0.74	+1.0
3,167,031	-		Pf6N2E2_2678	0.74	+0.0
3,167,031	-		Pf6N2E2_2678	0.74	+0.8
3,167,043	-		Pf6N2E2_2678	0.75	+0.5
3,167,043	-		Pf6N2E2_2678	0.75	+0.4
3,167,043	-		Pf6N2E2_2678	0.75	+0.3
3,167,043	-		Pf6N2E2_2678	0.75	+0.2
3,167,043	-		Pf6N2E2_2678	0.75	+0.8
3,167,043	-		Pf6N2E2_2678	0.75	+1.8
3,167,043	-		Pf6N2E2_2678	0.75	-1.4
3,167,171	+				+0.6
3,167,171	+				-0.1
3,167,171	+				+0.2
3,167,171	+				+0.4
3,167,195	+				+0.4
3,167,245	+				-0.4
3,167,246	-				-2.0
3,167,246	-				-0.2
3,167,246	-				-0.4
3,167,249	+				+0.6
3,167,249	+				-0.2