Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2240

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
2,654,098	+		Pf6N2E2_2239	0.54	-1.5
2,654,232	+		Pf6N2E2_2239	0.62	+0.6
2,654,350	+		Pf6N2E2_2239	0.70	-0.6
2,654,386	+		Pf6N2E2_2239	0.72	+0.2
2,654,386	+		Pf6N2E2_2239	0.72	+1.9
2,654,386	+		Pf6N2E2_2239	0.72	-1.8
2,654,387	-		Pf6N2E2_2239	0.72	+1.1
2,654,387	-		Pf6N2E2_2239	0.72	+0.3
2,654,391	+		Pf6N2E2_2239	0.72	+1.2
2,654,392	-		Pf6N2E2_2239	0.72	-0.9
2,654,392	-		Pf6N2E2_2239	0.72	-0.2
2,654,392	-		Pf6N2E2_2239	0.72	+0.3
2,654,706	+				+0.6
2,654,707	-				+0.3
2,654,815	+				+0.3
2,654,891	+				+1.1
2,654,892	-				-0.1
2,655,234	+		Pf6N2E2_2240	0.31	+0.5
2,655,234	+		Pf6N2E2_2240	0.31	-2.0
2,655,237	+		Pf6N2E2_2240	0.31	-0.8
2,655,238	-		Pf6N2E2_2240	0.31	+0.1
2,655,238	-		Pf6N2E2_2240	0.31	+0.2
2,655,238	-		Pf6N2E2_2240	0.31	-1.0
2,655,309	+		Pf6N2E2_2240	0.42	-1.9
2,655,310	-		Pf6N2E2_2240	0.42	+0.7
2,655,463	-		Pf6N2E2_2240	0.65	-0.3
2,655,463	-		Pf6N2E2_2240	0.65	-0.5
2,655,570	+		Pf6N2E2_2240	0.82	-0.7
2,655,571	-		Pf6N2E2_2240	0.82	-0.5
2,655,571	-		Pf6N2E2_2240	0.82	-0.4
2,655,571	-				+1.7
2,655,571	-		Pf6N2E2_2240	0.82	+0.6
2,655,571	-		Pf6N2E2_2240	0.82	+0.5
2,655,571	-		Pf6N2E2_2240	0.82	-0.1
2,655,574	-		Pf6N2E2_2240	0.82	-0.3
2,655,574	-		Pf6N2E2_2240	0.82	-0.3
2,655,657	-				-1.1
2,655,785	-				-0.7
2,655,811	+				-1.1
2,655,811	+				-0.3
2,655,812	-				-0.7
2,655,812	-				+2.1
2,655,835	+				+0.2
2,655,835	+				+0.4
2,655,835	+				-0.7
2,655,835	+				-0.6
2,655,835	+				-1.6
2,655,835	+				+0.3
2,655,835	+				-0.7
2,655,835	+				-0.6
2,655,835	+				+0.9
2,655,836	-				-0.2
2,655,836	-				-1.0
2,655,836	-				-1.3
2,655,836	-				+0.1
2,655,836	-				-0.3
2,655,836	-				+0.6
2,655,836	-				+1.0
2,655,836	-				+1.3
2,655,836	-				-0.9
2,655,836	-				+0.7
2,655,836	-				+0.7
2,655,853	+				-0.6
2,655,853	+				+0.5
2,655,854	-				-1.4
2,655,961	+				+0.2
2,655,961	+				-1.1
2,655,961	+				+0.4
2,655,962	-				+0.0
2,656,071	+		Pf6N2E2_2241	0.15	+0.6
2,656,071	+		Pf6N2E2_2241	0.15	+2.1
2,656,071	+		Pf6N2E2_2241	0.15	-0.8
2,656,071	+		Pf6N2E2_2241	0.15	-0.7
2,656,116	+		Pf6N2E2_2241	0.18	+0.2
2,656,116	+		Pf6N2E2_2241	0.18	+1.3
2,656,116	+		Pf6N2E2_2241	0.18	+0.1
2,656,116	+		Pf6N2E2_2241	0.18	+0.5
2,656,116	+		Pf6N2E2_2241	0.18	+0.3
2,656,116	+		Pf6N2E2_2241	0.18	-0.6
2,656,116	+		Pf6N2E2_2241	0.18	+0.1
2,656,116	+		Pf6N2E2_2241	0.18	+0.1
2,656,116	+		Pf6N2E2_2241	0.18	+0.9
2,656,116	+		Pf6N2E2_2241	0.18	+0.2
2,656,117	-		Pf6N2E2_2241	0.18	+0.4
2,656,117	-		Pf6N2E2_2241	0.18	+0.3
2,656,117	-		Pf6N2E2_2241	0.18	-0.4
2,656,117	-		Pf6N2E2_2241	0.18	-0.0
2,656,117	-		Pf6N2E2_2241	0.18	-0.0
2,656,215	+		Pf6N2E2_2241	0.25	-0.5
2,656,215	+		Pf6N2E2_2241	0.25	+1.5
2,656,215	+		Pf6N2E2_2241	0.25	+0.5
2,656,216	-		Pf6N2E2_2241	0.25	+0.5
2,656,216	-		Pf6N2E2_2241	0.25	-0.5
2,656,216	-		Pf6N2E2_2241	0.25	+1.6
2,656,372	+		Pf6N2E2_2241	0.37	+0.1
2,656,373	-		Pf6N2E2_2241	0.37	-1.8
2,656,373	-		Pf6N2E2_2241	0.37	+0.3