Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2145

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
2,549,844	+				+1.0
2,549,845	-				-2.7
2,549,854	+				-0.6
2,549,854	+				+0.7
2,549,855	-				-0.1
2,549,855	-				-1.4
2,549,855	-				+1.0
2,549,855	-				+0.1
2,549,855	-				-0.0
2,549,855	-				-0.1
2,549,855	-				+1.2
2,549,872	+				-0.2
2,549,873	-				+2.0
2,549,873	-				-1.3
2,549,938	-				+2.6
2,549,938	-				-0.9
2,549,938	-				-0.0
2,550,080	+		Pf6N2E2_2144	0.17	+0.6
2,550,095	+		Pf6N2E2_2144	0.20	-1.1
2,550,095	+		Pf6N2E2_2144	0.20	+0.7
2,550,095	+		Pf6N2E2_2144	0.20	-1.0
2,550,095	+		Pf6N2E2_2144	0.20	-0.3
2,550,095	+		Pf6N2E2_2144	0.20	+0.8
2,550,096	-		Pf6N2E2_2144	0.20	-0.5
2,550,552	-				+1.2
2,550,723	+				-1.9
2,550,946	+		Pf6N2E2_2145	0.16	-0.6
2,550,946	+		Pf6N2E2_2145	0.16	+0.8
2,550,947	-		Pf6N2E2_2145	0.16	-2.4
2,550,947	-		Pf6N2E2_2145	0.16	+1.6
2,551,122	+		Pf6N2E2_2145	0.32	+0.0
2,551,123	-		Pf6N2E2_2145	0.32	+1.3
2,551,193	-		Pf6N2E2_2145	0.39	-0.4
2,551,207	+		Pf6N2E2_2145	0.40	-1.2
2,551,207	+		Pf6N2E2_2145	0.40	-0.8
2,551,207	+		Pf6N2E2_2145	0.40	-0.2
2,551,208	-		Pf6N2E2_2145	0.40	-1.1
2,551,208	-		Pf6N2E2_2145	0.40	-0.4
2,551,247	-		Pf6N2E2_2145	0.43	+0.1
2,551,247	-		Pf6N2E2_2145	0.43	+0.3
2,551,306	+		Pf6N2E2_2145	0.49	+2.0
2,551,306	+		Pf6N2E2_2145	0.49	-0.6
2,551,307	-		Pf6N2E2_2145	0.49	-1.3
2,551,477	+		Pf6N2E2_2145	0.64	+0.6
2,551,664	+		Pf6N2E2_2145	0.82	-0.3
2,551,696	+		Pf6N2E2_2145	0.84	-1.7
2,551,696	+		Pf6N2E2_2145	0.84	-2.1
2,551,697	-		Pf6N2E2_2145	0.85	-1.2
2,551,697	-		Pf6N2E2_2145	0.85	+0.5
2,551,697	-		Pf6N2E2_2145	0.85	+0.4
2,551,697	-		Pf6N2E2_2145	0.85	-0.8
2,551,697	-		Pf6N2E2_2145	0.85	+0.2
2,551,697	-		Pf6N2E2_2145	0.85	+1.0
2,551,697	-		Pf6N2E2_2145	0.85	+0.4
2,551,697	-		Pf6N2E2_2145	0.85	+0.6
2,551,697	-		Pf6N2E2_2145	0.85	-0.3
2,551,697	-		Pf6N2E2_2145	0.85	-0.8
2,551,697	-		Pf6N2E2_2145	0.85	-1.4
2,551,697	-		Pf6N2E2_2145	0.85	-0.9
2,551,901	+				-1.0
2,551,901	+				+0.6
2,551,901	+				+0.6
2,551,901	+				-0.2
2,551,901	+				-0.1
2,551,901	+				-1.1
2,551,901	+				+1.0
2,551,901	+				+0.0
2,551,901	+				-2.8
2,551,902	-				-0.1
2,551,902	-				-1.8
2,551,924	+				-0.3
2,551,924	+				-0.1
2,552,022	+				-0.6
2,552,023	-				-0.1
2,552,076	-				+1.1
2,552,148	+		Pf6N2E2_2146	0.16	-0.8
2,552,149	-		Pf6N2E2_2146	0.17	-0.4
2,552,202	+		Pf6N2E2_2146	0.22	-1.2
2,552,203	-		Pf6N2E2_2146	0.22	-0.0
2,552,203	-		Pf6N2E2_2146	0.22	+0.2
2,552,355	+		Pf6N2E2_2146	0.38	-0.8
2,552,356	-		Pf6N2E2_2146	0.38	+2.4
2,552,356	-		Pf6N2E2_2146	0.38	-0.4
2,552,382	+		Pf6N2E2_2146	0.40	+0.2
2,552,383	-		Pf6N2E2_2146	0.41	+0.3
2,552,586	+		Pf6N2E2_2146	0.61	+1.4
2,552,754	+		Pf6N2E2_2146	0.79	-0.1