Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2020

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
2,408,013	+		Pf6N2E2_2019	0.87	+0.7
2,408,013	+		Pf6N2E2_2019	0.87	+0.7
2,408,013	+		Pf6N2E2_2019	0.87	+1.1
2,408,013	+		Pf6N2E2_2019	0.87	-1.6
2,408,013	+		Pf6N2E2_2019	0.87	-1.0
2,408,024	+		Pf6N2E2_2019	0.87	+0.3
2,408,025	-		Pf6N2E2_2019	0.87	-1.9
2,408,035	+		Pf6N2E2_2019	0.87	+0.2
2,408,036	-		Pf6N2E2_2019	0.87	-1.0
2,408,036	-		Pf6N2E2_2019	0.87	-0.5
2,408,087	+		Pf6N2E2_2019	0.88	+0.6
2,408,087	+		Pf6N2E2_2019	0.88	-0.6
2,408,087	+		Pf6N2E2_2019	0.88	+0.6
2,408,096	+		Pf6N2E2_2019	0.89	-1.2
2,408,104	+		Pf6N2E2_2019	0.89	+0.1
2,408,104	+		Pf6N2E2_2019	0.89	-1.0
2,408,104	+		Pf6N2E2_2019	0.89	+0.4
2,408,104	+		Pf6N2E2_2019	0.89	+0.5
2,408,105	-				+1.1
2,408,105	-		Pf6N2E2_2019	0.89	+0.2
2,408,168	+				+1.1
2,408,168	+				+0.3
2,408,168	+				-0.0
2,408,168	+				+0.0
2,408,168	+				+0.3
2,408,168	+				+0.9
2,408,168	+				+0.8
2,408,168	+				-2.4
2,408,196	+				-0.7
2,408,294	+				+0.4
2,408,294	+				-1.1
2,408,294	+				-0.8
2,408,295	-				+0.7
2,408,335	-				+0.4
2,408,369	+				-0.2
2,408,377	+				-2.0
2,408,378	-				+0.1
2,408,414	+				-1.4
2,408,415	-				-0.3
2,408,415	-				-0.8
2,408,460	-				+0.5
2,408,484	-				+0.1
2,408,513	-				-2.6
2,408,533	+				-0.0
2,408,533	+				+0.5
2,408,534	-				+0.5
2,408,536	+				-0.3
2,408,536	+				+0.4
2,408,536	+				-0.3
2,408,536	+				+0.8
2,408,536	+				+2.3
2,408,537	-				+1.8
2,408,537	-				-1.3
2,408,537	-				+0.3
2,408,543	+				-0.0
2,408,620	+				-0.3
2,408,635	+				+1.4
2,408,635	+				-0.8
2,408,636	-				-1.8
2,408,676	+				-0.6
2,408,680	+				+0.4
2,408,712	+				+0.7
2,408,712	+				-0.0
2,408,712	+				-1.5
2,408,712	+				+0.0
2,408,712	+				-0.3
2,408,712	+				+1.4
2,408,712	+				-2.7
2,408,713	-				+0.7
2,408,713	-				+0.2
2,408,713	-				-0.1
2,408,713	-				-1.8
2,408,715	+				+0.8
2,408,776	+				+1.0
2,408,776	+				-0.3
2,408,776	+				+0.2
2,408,776	+				+2.0
2,408,776	+				-0.2
2,408,776	+				-1.5
2,408,777	-				+0.6
2,408,935	+				+0.7
2,408,935	+				-1.1
2,408,936	-				+0.4
2,408,936	-				+0.7
2,409,579	-				+1.0
2,409,593	-				-2.4
2,409,593	-				-0.6
2,409,614	+				-2.3
2,409,737	+				+0.3
2,409,737	+				+0.3
2,409,738	-				+0.5
2,409,877	+		Pf6N2E2_2021	0.17	+0.3
2,409,877	+		Pf6N2E2_2021	0.17	-1.1
2,410,081	+		Pf6N2E2_2021	0.29	-0.4
2,410,081	+		Pf6N2E2_2021	0.29	+0.4
2,410,081	+		Pf6N2E2_2021	0.29	-1.5
2,410,082	-		Pf6N2E2_2021	0.29	-0.0
2,410,082	-		Pf6N2E2_2021	0.29	-0.8
2,410,114	+		Pf6N2E2_2021	0.31	+0.3
2,410,114	+		Pf6N2E2_2021	0.31	-1.9
2,410,204	+		Pf6N2E2_2021	0.36	-0.0
2,410,205	-		Pf6N2E2_2021	0.36	-0.2
2,410,486	+		Pf6N2E2_2021	0.52	+0.4
2,410,486	+		Pf6N2E2_2021	0.52	+0.5
2,410,487	-		Pf6N2E2_2021	0.52	+0.3
2,410,487	-		Pf6N2E2_2021	0.52	+1.6
2,410,487	-		Pf6N2E2_2021	0.52	-0.8
2,410,489	+		Pf6N2E2_2021	0.52	+0.8