Experiment: sodium iodate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_200 and Pf6N2E2_201 overlap by 10 nucleotides Pf6N2E2_201 and Pf6N2E2_202 overlap by 4 nucleotides
Pf6N2E2_200 - Possible glycosyltransferase, at 250,861 to 251,967
_200
Pf6N2E2_201 - UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14), at 251,958 to 253,067
_201
Pf6N2E2_202 - 4Fe-4S ferredoxin, iron-sulfur binding, at 253,064 to 254,650
_202
Position (kb) 251
252
253
254 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 251.087 kb on + strand, within Pf6N2E2_200 at 251.088 kb on - strand, within Pf6N2E2_200 at 251.222 kb on - strand, within Pf6N2E2_200 at 251.222 kb on - strand, within Pf6N2E2_200 at 251.422 kb on + strand, within Pf6N2E2_200 at 251.423 kb on - strand, within Pf6N2E2_200 at 251.476 kb on + strand, within Pf6N2E2_200 at 251.476 kb on + strand, within Pf6N2E2_200 at 251.477 kb on - strand, within Pf6N2E2_200 at 251.544 kb on - strand, within Pf6N2E2_200 at 251.574 kb on - strand, within Pf6N2E2_200 at 251.870 kb on - strand at 251.954 kb on + strand at 251.954 kb on + strand at 251.954 kb on + strand at 251.955 kb on - strand at 251.955 kb on - strand at 251.955 kb on - strand at 251.977 kb on + strand at 251.977 kb on + strand at 252.056 kb on - strand at 252.241 kb on + strand, within Pf6N2E2_201 at 252.242 kb on - strand, within Pf6N2E2_201 at 252.242 kb on - strand, within Pf6N2E2_201 at 252.242 kb on - strand, within Pf6N2E2_201 at 252.274 kb on + strand, within Pf6N2E2_201 at 252.274 kb on + strand, within Pf6N2E2_201 at 252.274 kb on + strand, within Pf6N2E2_201 at 252.688 kb on - strand, within Pf6N2E2_201 at 252.688 kb on - strand, within Pf6N2E2_201 at 253.053 kb on + strand at 253.054 kb on - strand at 253.054 kb on - strand at 253.054 kb on - strand at 253.091 kb on + strand at 253.091 kb on + strand at 253.091 kb on + strand at 253.183 kb on + strand at 253.183 kb on + strand at 253.183 kb on + strand at 253.184 kb on - strand at 253.338 kb on + strand, within Pf6N2E2_202 at 253.338 kb on + strand, within Pf6N2E2_202 at 253.339 kb on - strand, within Pf6N2E2_202 at 253.472 kb on - strand, within Pf6N2E2_202 at 253.472 kb on - strand, within Pf6N2E2_202 at 253.472 kb on - strand, within Pf6N2E2_202 at 253.604 kb on - strand, within Pf6N2E2_202 at 253.941 kb on + strand, within Pf6N2E2_202 at 253.941 kb on + strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202
Per-strain Table
Position Strand Gene LocusTag Fraction sodium iodate 0.005 M remove 251,087 + Pf6N2E2_200 0.20 -0.3 251,088 - Pf6N2E2_200 0.21 +0.4 251,222 - Pf6N2E2_200 0.33 +0.2 251,222 - Pf6N2E2_200 0.33 +0.8 251,422 + Pf6N2E2_200 0.51 -1.7 251,423 - Pf6N2E2_200 0.51 -0.4 251,476 + Pf6N2E2_200 0.56 +0.6 251,476 + Pf6N2E2_200 0.56 +2.3 251,477 - Pf6N2E2_200 0.56 +1.6 251,544 - Pf6N2E2_200 0.62 +0.5 251,574 - Pf6N2E2_200 0.64 +0.1 251,870 - -0.1 251,954 + -0.4 251,954 + -0.5 251,954 + -0.4 251,955 - -0.0 251,955 - -0.2 251,955 - +0.4 251,977 + -1.0 251,977 + -0.0 252,056 - +0.4 252,241 + Pf6N2E2_201 0.25 -1.0 252,242 - Pf6N2E2_201 0.26 -1.6 252,242 - Pf6N2E2_201 0.26 -1.6 252,242 - Pf6N2E2_201 0.26 -0.7 252,274 + Pf6N2E2_201 0.28 -0.2 252,274 + Pf6N2E2_201 0.28 -0.9 252,274 + Pf6N2E2_201 0.28 -0.9 252,688 - Pf6N2E2_201 0.66 -0.5 252,688 - Pf6N2E2_201 0.66 +0.3 253,053 + -1.0 253,054 - +0.5 253,054 - +0.2 253,054 - -1.3 253,091 + -1.1 253,091 + -0.4 253,091 + -0.2 253,183 + -1.7 253,183 + +1.3 253,183 + +1.1 253,184 - -0.0 253,338 + Pf6N2E2_202 0.17 -0.5 253,338 + Pf6N2E2_202 0.17 +0.2 253,339 - Pf6N2E2_202 0.17 -0.7 253,472 - Pf6N2E2_202 0.26 -0.5 253,472 - Pf6N2E2_202 0.26 -0.4 253,472 - Pf6N2E2_202 0.26 +0.2 253,604 - Pf6N2E2_202 0.34 +0.2 253,941 + Pf6N2E2_202 0.55 -0.4 253,941 + Pf6N2E2_202 0.55 +0.4 253,942 - Pf6N2E2_202 0.55 +0.3 253,942 - Pf6N2E2_202 0.55 -1.3 253,942 - Pf6N2E2_202 0.55 +0.1 253,942 - Pf6N2E2_202 0.55 -0.4 253,942 - Pf6N2E2_202 0.55 -1.4 253,942 - Pf6N2E2_202 0.55 -1.8 253,942 - Pf6N2E2_202 0.55 -0.7 253,942 - Pf6N2E2_202 0.55 +3.1 253,942 - Pf6N2E2_202 0.55 -0.4 253,942 - Pf6N2E2_202 0.55 -1.3
Or see this region's nucleotide sequence