Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1929

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
2,282,613	-				+1.2
2,282,771	+		Pf6N2E2_1928	0.28	-1.0
2,282,772	-		Pf6N2E2_1928	0.28	-1.4
2,282,772	-		Pf6N2E2_1928	0.28	-0.6
2,282,772	-		Pf6N2E2_1928	0.28	-0.7
2,282,799	+		Pf6N2E2_1928	0.31	-0.4
2,282,800	-		Pf6N2E2_1928	0.31	+1.0
2,283,028	-		Pf6N2E2_1928	0.61	-0.7
2,283,028	-		Pf6N2E2_1928	0.61	-0.2
2,283,028	-		Pf6N2E2_1928	0.61	-0.8
2,283,065	-		Pf6N2E2_1928	0.65	-1.4
2,283,065	-		Pf6N2E2_1928	0.65	+0.1
2,283,065	-		Pf6N2E2_1928	0.65	-2.4
2,283,167	-		Pf6N2E2_1928	0.79	+0.1
2,283,202	-		Pf6N2E2_1928	0.83	-2.4
2,283,202	-		Pf6N2E2_1928	0.83	-0.2
2,283,202	-		Pf6N2E2_1928	0.83	+1.4
2,283,331	+				-1.0
2,283,345	+				-0.8
2,283,346	-				-1.4
2,283,373	+				+0.2
2,283,380	-				+0.7
2,283,398	+				+0.0
2,283,400	+				-0.6
2,283,400	+				+1.4
2,283,400	+				-1.0
2,283,400	+				+0.4
2,283,400	+				-0.5
2,283,400	+				+2.3
2,283,401	-				+1.0
2,283,401	-				-0.9
2,283,401	-				-2.2
2,283,401	-				-0.4
2,283,727	+		Pf6N2E2_1929	0.21	-1.4
2,283,749	-		Pf6N2E2_1929	0.23	+0.2
2,283,749	-		Pf6N2E2_1929	0.23	+0.3
2,283,867	-		Pf6N2E2_1929	0.32	+0.6
2,283,895	+		Pf6N2E2_1929	0.34	-1.0
2,283,895	+		Pf6N2E2_1929	0.34	-1.9
2,283,911	+		Pf6N2E2_1929	0.35	+0.7
2,283,911	+		Pf6N2E2_1929	0.35	+0.6
2,283,911	+				+2.0
2,283,911	+		Pf6N2E2_1929	0.35	-0.8
2,283,912	-		Pf6N2E2_1929	0.35	-0.0
2,284,091	-		Pf6N2E2_1929	0.48	+1.0
2,284,395	+		Pf6N2E2_1929	0.71	+1.6
2,284,430	-		Pf6N2E2_1929	0.74	-1.0
2,284,430	-		Pf6N2E2_1929	0.74	+0.1
2,284,430	-		Pf6N2E2_1929	0.74	-1.0
2,284,434	-		Pf6N2E2_1929	0.74	-1.1
2,284,434	-		Pf6N2E2_1929	0.74	-0.2
2,284,434	-		Pf6N2E2_1929	0.74	-0.8
2,284,460	+		Pf6N2E2_1929	0.76	-0.4
2,284,532	-		Pf6N2E2_1929	0.81	-2.9
2,284,535	+		Pf6N2E2_1929	0.82	+0.1
2,284,536	-		Pf6N2E2_1929	0.82	+1.2
2,284,536	-		Pf6N2E2_1929	0.82	-1.1
2,284,730	+				+1.0
2,284,731	-				-1.9
2,284,731	-				-0.0
2,284,731	-				-0.5
2,284,731	-				-1.0
2,284,797	-				+2.7
2,284,797	-				+2.2
2,284,797	-				+0.2
2,284,797	-				-2.2
2,284,823	-				-1.2
2,284,934	-				-0.5
2,284,941	-				-1.0
2,284,941	-				-1.8
2,284,990	+				+1.3
2,284,991	-				+0.2
2,284,991	-				+0.5
2,285,041	-				+0.7
2,285,081	+				+1.0
2,285,082	-				+0.2
2,285,107	-				-0.7
2,285,107	-				-0.1
2,285,174	+				+0.1
2,285,175	-				+2.1
2,285,277	-				-1.5
2,285,277	-				-1.3
2,285,277	-				+1.0
2,285,289	+				+1.1
2,285,290	-				+1.3
2,285,313	+				-1.5
2,285,376	-		Pf6N2E2_1930	0.13	+1.1
2,285,376	-		Pf6N2E2_1930	0.13	+0.6
2,285,516	+		Pf6N2E2_1930	0.23	-0.4
2,285,516	+		Pf6N2E2_1930	0.23	+1.2
2,285,516	+		Pf6N2E2_1930	0.23	+1.9
2,285,516	+		Pf6N2E2_1930	0.23	+1.0
2,285,516	+		Pf6N2E2_1930	0.23	-1.7
2,285,516	+		Pf6N2E2_1930	0.23	-2.5
2,285,517	-		Pf6N2E2_1930	0.23	-1.7
2,285,517	-		Pf6N2E2_1930	0.23	-0.6
2,285,517	-		Pf6N2E2_1930	0.23	-0.5
2,285,612	+		Pf6N2E2_1930	0.30	+0.2
2,285,612	+		Pf6N2E2_1930	0.30	-2.2
2,285,612	+		Pf6N2E2_1930	0.30	-0.8
2,285,612	+		Pf6N2E2_1930	0.30	+1.5
2,285,612	+		Pf6N2E2_1930	0.30	+1.8
2,285,612	+		Pf6N2E2_1930	0.30	-1.7
2,285,613	-		Pf6N2E2_1930	0.30	+1.2
2,285,613	-		Pf6N2E2_1930	0.30	+0.3
2,285,613	-		Pf6N2E2_1930	0.30	-0.5
2,285,613	-		Pf6N2E2_1930	0.30	-0.3
2,285,613	-		Pf6N2E2_1930	0.30	+0.6
2,285,649	-		Pf6N2E2_1930	0.32	+0.7
2,285,744	+		Pf6N2E2_1930	0.39	-2.2
2,285,744	+		Pf6N2E2_1930	0.39	-0.2