Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1519

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
1,774,185	-				+1.2
1,774,662	+		Pf6N2E2_1518	0.72	+1.1
1,774,873	+				+0.6
1,774,874	-				+0.4
1,775,039	-				-0.0
1,775,255	+				-0.3
1,775,255	+				-1.4
1,775,255	+				-1.1
1,775,256	-				-1.1
1,775,256	-				+0.9
1,775,256	-				+0.3
1,775,256	-				+1.9
1,775,544	+		Pf6N2E2_1519	0.29	+0.3
1,775,544	+		Pf6N2E2_1519	0.29	-0.6
1,775,545	-		Pf6N2E2_1519	0.29	+2.1
1,775,545	-		Pf6N2E2_1519	0.29	-0.3
1,775,657	+		Pf6N2E2_1519	0.38	+0.2
1,775,657	+		Pf6N2E2_1519	0.38	+0.3
1,775,657	+		Pf6N2E2_1519	0.38	+1.4
1,775,658	-		Pf6N2E2_1519	0.38	-0.1
1,775,747	+		Pf6N2E2_1519	0.44	+0.7
1,775,748	-		Pf6N2E2_1519	0.44	+0.9
1,775,876	+		Pf6N2E2_1519	0.54	+0.8
1,775,876	+		Pf6N2E2_1519	0.54	-0.6
1,775,877	-		Pf6N2E2_1519	0.54	+0.6
1,776,128	+		Pf6N2E2_1519	0.72	-0.9
1,776,129	-		Pf6N2E2_1519	0.72	+0.3
1,776,395	+				-0.2
1,776,527	+				-2.4
1,776,528	-				-0.1
1,776,633	+				-0.9
1,776,634	-				-0.2
1,776,891	+		Pf6N2E2_1520	0.32	-0.4
1,776,892	-		Pf6N2E2_1520	0.33	+0.1
1,776,909	+		Pf6N2E2_1520	0.34	+0.8
1,776,909	+		Pf6N2E2_1520	0.34	-0.3
1,776,909	+		Pf6N2E2_1520	0.34	+0.8
1,777,031	+		Pf6N2E2_1520	0.48	-0.1
1,777,032	-		Pf6N2E2_1520	0.48	+0.1
1,777,032	-		Pf6N2E2_1520	0.48	-0.7
1,777,071	+		Pf6N2E2_1520	0.53	+0.4
1,777,072	-		Pf6N2E2_1520	0.53	-0.6
1,777,072	-		Pf6N2E2_1520	0.53	+0.2
1,777,072	-		Pf6N2E2_1520	0.53	+0.5
1,777,138	+		Pf6N2E2_1520	0.60	-2.1
1,777,138	+		Pf6N2E2_1520	0.60	-1.1
1,777,151	+		Pf6N2E2_1520	0.62	-0.4
1,777,151	+		Pf6N2E2_1520	0.62	-1.3
1,777,152	-		Pf6N2E2_1520	0.62	-0.4
1,777,152	-		Pf6N2E2_1520	0.62	-0.4
1,777,308	+		Pf6N2E2_1520	0.79	+0.1
1,777,308	+		Pf6N2E2_1520	0.79	+0.9
1,777,308	+		Pf6N2E2_1520	0.79	-0.6
1,777,308	+		Pf6N2E2_1520	0.79	+0.3
1,777,309	-		Pf6N2E2_1520	0.79	-0.6
1,777,309	-		Pf6N2E2_1520	0.79	+0.9
1,777,309	-		Pf6N2E2_1520	0.79	-0.1
1,777,309	-		Pf6N2E2_1520	0.79	-1.6