Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1288

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
1,518,039	+		Pf6N2E2_1287	0.40	+0.2
1,518,040	-		Pf6N2E2_1287	0.40	+0.4
1,518,040	-		Pf6N2E2_1287	0.40	-0.2
1,518,054	+		Pf6N2E2_1287	0.42	-3.3
1,518,092	+		Pf6N2E2_1287	0.49	-0.6
1,518,093	-		Pf6N2E2_1287	0.49	+1.5
1,518,401	-				-0.2
1,518,810	-				+0.4
1,518,858	+				+0.6
1,518,859	-				+0.9
1,519,030	-		Pf6N2E2_1288	0.22	-2.4
1,519,101	+		Pf6N2E2_1288	0.31	+0.6
1,519,113	+		Pf6N2E2_1288	0.32	-1.1
1,519,617	+				-0.1
1,519,617	+				-0.6
1,519,617	+				-0.9
1,519,617	+				+1.0
1,519,617	+				+1.4
1,519,618	-				-0.6
1,519,618	-				+0.7
1,519,623	+				-1.1
1,519,623	+				+1.8
1,519,623	+				-1.3
1,519,654	+				+0.8
1,519,655	-				-1.2
1,519,667	+				-0.9
1,519,667	+				+0.5
1,519,667	+				+2.3
1,520,055	-		Pf6N2E2_1289	0.42	-2.8
1,520,069	-		Pf6N2E2_1289	0.44	-0.1
1,520,123	+		Pf6N2E2_1289	0.50	-0.1
1,520,123	+		Pf6N2E2_1289	0.50	+0.1
1,520,342	+		Pf6N2E2_1289	0.73	-1.6
1,520,342	+		Pf6N2E2_1289	0.73	-0.6
1,520,343	-		Pf6N2E2_1289	0.73	-0.6
1,520,343	-		Pf6N2E2_1289	0.73	+0.9
1,520,343	-		Pf6N2E2_1289	0.73	+0.3
1,520,343	-		Pf6N2E2_1289	0.73	+0.5
1,520,346	+		Pf6N2E2_1289	0.73	+0.2
1,520,347	-		Pf6N2E2_1289	0.73	-1.4
1,520,347	-		Pf6N2E2_1289	0.73	+0.7
1,520,423	+		Pf6N2E2_1289	0.81	-0.2
1,520,423	+		Pf6N2E2_1289	0.81	+0.3
1,520,514	-				-0.6
1,520,606	+				-0.6
1,520,606	+				-0.7
1,520,606	+				-0.7
1,520,606	+				-0.6
1,520,606	+				-0.7
1,520,607	-				-0.1
1,520,607	-				+0.5
1,520,617	+				-1.2