Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1044

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
1,217,710	+				-1.5
1,217,710	+				+0.2
1,217,710	+				-0.5
1,217,729	+				-0.8
1,217,730	-				+1.5
1,217,730	-				-0.3
1,217,883	+		Pf6N2E2_1043	0.20	-0.2
1,218,081	+		Pf6N2E2_1043	0.46	-0.2
1,218,081	+		Pf6N2E2_1043	0.46	+0.9
1,218,081	+		Pf6N2E2_1043	0.46	-2.8
1,218,082	-		Pf6N2E2_1043	0.46	+0.0
1,218,082	-		Pf6N2E2_1043	0.46	+1.4
1,218,320	+		Pf6N2E2_1043	0.77	-0.8
1,218,321	-		Pf6N2E2_1043	0.77	-0.5
1,218,387	-		Pf6N2E2_1043	0.86	-0.1
1,218,534	+				-0.0
1,218,534	+				+0.6
1,218,541	-				-0.2
1,218,541	-				+1.2
1,218,558	+				-0.8
1,218,559	-				-0.2
1,218,565	+				+1.0
1,218,566	-				+0.2
1,218,566	-				+0.7
1,218,566	-				+0.8
1,218,629	+				-1.0
1,218,629	+				+0.2
1,218,629	+				+0.8
1,218,633	+				+0.4
1,218,634	-				+1.3
1,218,673	-				-0.9
1,218,707	+		Pf6N2E2_1044	0.19	-1.0
1,218,708	-		Pf6N2E2_1044	0.19	+0.2
1,218,708	-		Pf6N2E2_1044	0.19	+0.2
1,218,708	-		Pf6N2E2_1044	0.19	-1.3
1,218,710	-		Pf6N2E2_1044	0.20	-0.4
1,218,808	+		Pf6N2E2_1044	0.71	+0.8
1,218,809	-		Pf6N2E2_1044	0.72	-0.5
1,218,868	+				-0.5
1,218,868	+				-1.9
1,218,869	-				-0.3
1,218,869	-				-1.0
1,218,869	-				+0.2
1,218,869	-				-0.8
1,218,869	-				+0.8
1,218,869	-				-0.1
1,218,869	-				-0.5
1,218,869	-				+0.6
1,218,869	-				+2.8
1,218,869	-				+3.2
1,218,869	-				+1.1
1,218,870	+				+0.5
1,218,870	+				-0.5
1,218,870	+				+1.4
1,218,870	+				+1.0
1,218,870	+				+1.8
1,218,870	+				+1.1
1,218,870	+				-1.3
1,218,871	-				-2.2
1,218,871	-				+0.3
1,218,871	-				-1.3
1,218,871	-				+0.2
1,218,871	-				+0.6
1,218,871	-				-1.0
1,218,871	-				-1.5
1,218,871	-				-0.5
1,218,871	-				-0.8
1,218,889	-				-0.6
1,218,950	+				-1.0
1,218,950	+				-2.1
1,218,950	+				-0.5
1,218,950	+				+0.2
1,218,950	+				-0.2
1,218,951	-				-1.0
1,218,951	-				+0.5
1,218,951	-				-1.2
1,219,027	+				+2.5
1,219,027	+				+1.8
1,219,179	+				-0.8
1,219,329	-				-0.9
1,219,514	+				-0.8
1,219,515	-				+0.2
1,219,515	-				+0.0
1,219,515	-				-0.2
1,219,562	-				+0.2
1,219,572	+				+1.8
1,219,573	-				+0.9
1,219,587	-				+0.6
1,219,640	+				+0.3
1,219,641	-				+0.1
1,219,641	-				-0.8
1,219,658	+				+1.5
1,219,715	+				-0.6
1,219,782	+				+0.8
1,219,783	-				-0.0
1,219,783	-				-0.2
1,219,789	+				-1.8
1,219,789	+				+0.5
1,219,790	-				-2.4
1,219,819	+				-0.8
1,219,819	+				+1.2
1,219,819	+				-0.4
1,219,819	+				+0.2
1,219,820	-				+0.6
1,219,820	-				-0.8