Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20740

Experiment: Temperature shift 30_to_4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 30_to_4
4,667,194	-		PFLU_RS20730	0.63	+0.1
4,667,194	-		PFLU_RS20730	0.63	+1.8
4,667,254	+				-0.5
4,667,254	+				+1.9
4,667,254	+				-1.3
4,667,254	+				+0.5
4,667,254	+				-2.4
4,667,255	-				+0.4
4,667,255	-				-0.3
4,667,255	-				-0.6
4,667,255	-				-0.4
4,667,255	-				-0.3
4,667,255	-				+1.4
4,667,255	-				-0.6
4,667,255	-				+0.1
4,667,266	+				+0.7
4,667,266	+				-0.4
4,667,266	+				+0.1
4,667,266	+				+2.0
4,667,266	+				-2.6
4,667,266	+				-1.3
4,667,267	-				+0.3
4,667,267	-				-0.2
4,667,289	+				-1.1
4,667,289	+				-1.1
4,667,289	+				-1.0
4,667,289	+				+0.9
4,667,289	+				-0.0
4,667,289	+				-2.3
4,667,289	+				-0.1
4,667,290	-				-0.3
4,667,290	-				+0.1
4,667,290	-				+0.1
4,667,290	-				+0.4
4,667,290	-				+0.9
4,667,290	-				+1.0
4,667,362	+				-0.6
4,667,362	+				-0.2
4,667,362	+				-1.9
4,667,363	-				+0.7
4,667,405	+				+0.9
4,667,431	+				+0.7
4,667,431	+				+0.1
4,667,432	-				-0.1
4,667,432	-				-0.3
4,667,456	+				-1.8
4,667,456	+				-0.5
4,667,456	+				+0.5
4,667,457	-				-0.5
4,667,457	-				-0.8
4,667,457	-				-0.1
4,667,485	+				+0.1
4,667,485	+				+0.4
4,667,486	-				+0.5
4,667,486	-				+0.8
4,667,486	-				-0.6
4,667,486	-				-0.3
4,667,489	+				-0.3
4,667,489	+				-0.1
4,667,489	+				-0.3
4,667,489	+				-0.3
4,667,489	+				-0.9
4,667,489	+				+1.8
4,667,490	-				+0.2
4,667,490	-				-0.7
4,667,490	-				+0.4
4,667,490	-				-0.5
4,667,490	-				+0.9
4,667,490	-				-1.2
4,667,490	-				-1.6
4,667,490	-				-1.1
4,667,528	+				+0.5
4,667,558	-		PFLU_RS20735	0.16	-0.9
4,667,612	+		PFLU_RS20735	0.28	-0.8
4,667,612	+		PFLU_RS20735	0.28	-0.5
4,667,612	+		PFLU_RS20735	0.28	-0.4
4,667,612	+		PFLU_RS20735	0.28	+0.6
4,667,613	-		PFLU_RS20735	0.28	-1.9
4,667,613	-		PFLU_RS20735	0.28	-0.9
4,667,613	-		PFLU_RS20735	0.28	+0.5
4,667,613	-		PFLU_RS20735	0.28	+0.9
4,667,613	-		PFLU_RS20735	0.28	-0.3
4,667,642	-		PFLU_RS20735	0.35	+0.3
4,667,703	+		PFLU_RS20735	0.49	+1.4
4,667,703	+		PFLU_RS20735	0.49	-0.3
4,667,703	+		PFLU_RS20735	0.49	-0.3
4,667,704	-		PFLU_RS20735	0.49	+0.9
4,667,704	-		PFLU_RS20735	0.49	-0.1
4,667,704	-		PFLU_RS20735	0.49	+1.4
4,667,704	-		PFLU_RS20735	0.49	+0.8
4,667,727	+		PFLU_RS20735	0.54	-0.9
4,667,727	+		PFLU_RS20735	0.54	-0.9
4,667,727	+		PFLU_RS20735	0.54	-0.2
4,667,727	+		PFLU_RS20735	0.54	+0.9
4,667,727	+		PFLU_RS20735	0.54	+0.2
4,667,728	-		PFLU_RS20735	0.55	-0.3
4,667,728	-		PFLU_RS20735	0.55	+0.4
4,667,728	-		PFLU_RS20735	0.55	-0.3
4,667,728	-		PFLU_RS20735	0.55	+0.5
4,667,728	-		PFLU_RS20735	0.55	-0.2
4,667,728	-		PFLU_RS20735	0.55	+0.5
4,667,779	+		PFLU_RS20735	0.66	+0.6
4,667,779	+		PFLU_RS20735	0.66	-0.2
4,667,780	-		PFLU_RS20735	0.67	+1.7
4,667,780	-		PFLU_RS20735	0.67	+0.4
4,667,780	-		PFLU_RS20735	0.67	+0.8
4,667,782	+		PFLU_RS20735	0.67	+0.6
4,667,782	+		PFLU_RS20735	0.67	+1.8
4,667,782	+		PFLU_RS20735	0.67	-0.2
4,667,783	-		PFLU_RS20735	0.67	-0.3
4,667,783	-		PFLU_RS20735	0.67	-0.3
4,667,783	-		PFLU_RS20735	0.67	-0.8
4,667,783	-		PFLU_RS20735	0.67	+1.3
4,667,796	+		PFLU_RS20735	0.70	+0.8
4,667,796	+		PFLU_RS20735	0.70	-0.5
4,667,796	+		PFLU_RS20735	0.70	-0.9
4,667,796	+		PFLU_RS20735	0.70	-1.3
4,667,796	+		PFLU_RS20735	0.70	-1.5
4,667,796	+		PFLU_RS20735	0.70	+0.5
4,667,796	+		PFLU_RS20735	0.70	+0.7
4,667,796	+		PFLU_RS20735	0.70	+0.2
4,667,796	+		PFLU_RS20735	0.70	-1.3
4,667,796	+		PFLU_RS20735	0.70	-0.2
4,667,797	-		PFLU_RS20735	0.71	-0.3
4,667,797	-		PFLU_RS20735	0.71	+0.2
4,667,797	-		PFLU_RS20735	0.71	-1.5
4,667,797	-		PFLU_RS20735	0.71	-0.7
4,667,797	-		PFLU_RS20735	0.71	-0.5
4,667,797	-		PFLU_RS20735	0.71	+0.9
4,667,797	-		PFLU_RS20735	0.71	-1.0
4,667,797	-		PFLU_RS20735	0.71	+1.1
4,667,797	-		PFLU_RS20735	0.71	+0.6
4,667,797	-		PFLU_RS20735	0.71	-1.5
4,667,797	-		PFLU_RS20735	0.71	+0.6
4,667,798	+		PFLU_RS20735	0.71	+0.8
4,667,799	-		PFLU_RS20735	0.71	-0.7
4,667,799	-		PFLU_RS20735	0.71	-0.1
4,667,799	-		PFLU_RS20735	0.71	-1.6
4,667,799	-		PFLU_RS20735	0.71	+0.9
4,667,839	+		PFLU_RS20735	0.80	-0.2
4,667,840	-		PFLU_RS20735	0.80	-0.1
4,667,840	-		PFLU_RS20735	0.80	-0.3
4,667,878	+		PFLU_RS20735	0.89	-0.1
4,667,878	+		PFLU_RS20735	0.89	+1.1
4,667,886	+				+0.8
4,667,886	+				+1.1
4,667,886	+				-1.1
4,667,886	+				-0.9
4,667,887	-				+0.0
4,667,887	-				-0.8
4,667,901	+				-1.1
4,667,901	+				-2.2
4,667,920	+				+0.6
4,667,920	+				+1.2
4,667,921	-				-1.4
4,667,922	+				-0.1
4,668,087	+				-0.9
4,668,087	+				+0.2
4,668,088	-				+0.3
4,668,088	-				+0.5
4,668,157	+				+0.9
4,668,158	-				+0.7
4,668,158	-				-0.6
4,668,159	+				-0.6
4,668,159	+				-0.6
4,668,159	+				+0.1
4,668,159	+				-0.2
4,668,159	+				-0.2
4,668,159	+				-0.2
4,668,160	-				+0.8
4,668,160	-				-0.1
4,668,160	-				+0.4
4,668,160	-				+0.7
4,668,160	-				+0.5
4,668,160	-				-1.3
4,668,160	-				+0.5
4,668,160	-				-0.1
4,668,199	+				+0.8
4,668,199	+				+2.0
4,668,199	+				-1.8
4,668,200	-				-1.0
4,668,200	-				+0.3
4,668,337	-		PFLU_RS20740	0.24	-0.1
4,668,480	+		PFLU_RS20740	0.40	+1.5
4,668,480	+		PFLU_RS20740	0.40	+0.1
4,668,480	+		PFLU_RS20740	0.40	+1.5
4,668,481	-		PFLU_RS20740	0.40	+1.9
4,668,489	+		PFLU_RS20740	0.41	+0.3
4,668,492	+		PFLU_RS20740	0.41	-2.3
4,668,492	+		PFLU_RS20740	0.41	+0.5
4,668,492	+		PFLU_RS20740	0.41	+0.2
4,668,492	+		PFLU_RS20740	0.41	+0.7
4,668,492	+		PFLU_RS20740	0.41	+1.9
4,668,492	+		PFLU_RS20740	0.41	-0.3
4,668,493	-		PFLU_RS20740	0.41	+1.8
4,668,493	-		PFLU_RS20740	0.41	-1.5
4,668,493	-		PFLU_RS20740	0.41	-1.0
4,668,662	-		PFLU_RS20740	0.59	+2.3
4,668,953	-				-0.7
4,669,032	+				-0.3
4,669,032	+				+0.2
4,669,033	-				-0.6
4,669,033	-				-0.3
4,669,033	-				-1.1
4,669,101	-		PFLU_RS20745	0.14	-0.3
4,669,101	-		PFLU_RS20745	0.14	+0.1
4,669,204	+		PFLU_RS20745	0.37	+0.0
4,669,242	+		PFLU_RS20745	0.46	+0.5
4,669,242	+		PFLU_RS20745	0.46	+0.2
4,669,242	+		PFLU_RS20745	0.46	+0.2
4,669,242	+		PFLU_RS20745	0.46	-1.9
4,669,242	+		PFLU_RS20745	0.46	+0.0
4,669,242	+		PFLU_RS20745	0.46	+0.1
4,669,242	+		PFLU_RS20745	0.46	+0.1
4,669,242	+		PFLU_RS20745	0.46	+1.3
4,669,242	+		PFLU_RS20745	0.46	-2.5
4,669,243	-		PFLU_RS20745	0.46	-0.3
4,669,296	+		PFLU_RS20745	0.58	-0.5
4,669,330	+		PFLU_RS20745	0.66	-3.2
4,669,330	+		PFLU_RS20745	0.66	+0.3
4,669,330	+		PFLU_RS20745	0.66	+0.7
4,669,330	+		PFLU_RS20745	0.66	-0.1
4,669,330	+		PFLU_RS20745	0.66	+0.5
4,669,330	+		PFLU_RS20745	0.66	+1.7
4,669,331	-		PFLU_RS20745	0.66	+0.1
4,669,331	-		PFLU_RS20745	0.66	+1.0
4,669,331	-		PFLU_RS20745	0.66	+0.8
4,669,331	-		PFLU_RS20745	0.66	-0.6
4,669,331	-		PFLU_RS20745	0.66	+0.5
4,669,334	+		PFLU_RS20745	0.67	-0.3
4,669,334	+		PFLU_RS20745	0.67	-1.1
4,669,334	+		PFLU_RS20745	0.67	+0.2
4,669,334	+		PFLU_RS20745	0.67	+0.4
4,669,334	+		PFLU_RS20745	0.67	+0.1
4,669,334	+		PFLU_RS20745	0.67	+0.9
4,669,335	-		PFLU_RS20745	0.67	+0.0
4,669,335	-		PFLU_RS20745	0.67	+0.5
4,669,335	-		PFLU_RS20745	0.67	+0.4
4,669,335	-		PFLU_RS20745	0.67	+0.5
4,669,335	-		PFLU_RS20745	0.67	+0.5
4,669,335	-		PFLU_RS20745	0.67	-0.2
4,669,335	-		PFLU_RS20745	0.67	+0.3
4,669,335	-		PFLU_RS20745	0.67	+0.3
4,669,335	-		PFLU_RS20745	0.67	-0.2
4,669,335	-		PFLU_RS20745	0.67	+0.7
4,669,335	-		PFLU_RS20745	0.67	-0.5
4,669,335	-		PFLU_RS20745	0.67	-0.4
4,669,335	-		PFLU_RS20745	0.67	+0.0
4,669,404	-		PFLU_RS20745	0.83	-1.4
4,669,585	+				-2.5
4,669,585	+				-0.7
4,669,585	+				+0.5
4,669,585	+				+0.1
4,669,586	-				-0.1
4,669,681	+		PFLU_RS20750	0.24	-0.1
4,669,681	+		PFLU_RS20750	0.24	-0.5
4,669,681	+		PFLU_RS20750	0.24	-0.3
4,669,681	+		PFLU_RS20750	0.24	-1.4
4,669,681	+		PFLU_RS20750	0.24	+0.9
4,669,681	+		PFLU_RS20750	0.24	+0.5
4,669,681	+		PFLU_RS20750	0.24	-0.2
4,669,681	+		PFLU_RS20750	0.24	+0.5
4,669,682	-		PFLU_RS20750	0.24	+0.1
4,669,682	-		PFLU_RS20750	0.24	-0.1
4,669,682	-		PFLU_RS20750	0.24	-0.5
4,669,682	-		PFLU_RS20750	0.24	-1.4
4,669,682	-		PFLU_RS20750	0.24	+0.3
4,669,682	-		PFLU_RS20750	0.24	+0.1
4,669,682	-		PFLU_RS20750	0.24	-2.1
4,669,682	-		PFLU_RS20750	0.24	-0.0
4,669,682	-		PFLU_RS20750	0.24	-0.3
4,669,719	-		PFLU_RS20750	0.31	-0.9
4,669,719	-		PFLU_RS20750	0.31	-0.8
4,669,732	+		PFLU_RS20750	0.33	+0.2
4,669,733	-		PFLU_RS20750	0.34	+0.5
4,669,894	+		PFLU_RS20750	0.62	+1.3
4,669,895	-		PFLU_RS20750	0.62	-1.4
4,669,895	-		PFLU_RS20750	0.62	-0.2
4,669,895	-		PFLU_RS20750	0.62	+1.5
4,669,915	+		PFLU_RS20750	0.66	+0.8
4,669,915	+		PFLU_RS20750	0.66	+0.4
4,669,927	+		PFLU_RS20750	0.68	-1.6
4,669,927	+		PFLU_RS20750	0.68	-0.9
4,669,927	+		PFLU_RS20750	0.68	+0.2
4,669,928	-		PFLU_RS20750	0.68	-1.4
4,669,928	-		PFLU_RS20750	0.68	+0.4
4,669,928	-		PFLU_RS20750	0.68	+0.5