Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11945

Experiment: D-Glucose-6-Phosphate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate 20 mM
2,647,381	-		LRK54_RS11940	0.20	+1.1
2,647,427	+		LRK54_RS11940	0.24	-1.8
2,647,428	-		LRK54_RS11940	0.24	+1.0
2,647,428	-		LRK54_RS11940	0.24	-3.5
2,647,428	-		LRK54_RS11940	0.24	-1.9
2,647,475	+		LRK54_RS11940	0.28	-0.8
2,647,475	+		LRK54_RS11940	0.28	-0.5
2,647,475	+		LRK54_RS11940	0.28	-1.5
2,647,476	-		LRK54_RS11940	0.28	+1.6
2,647,476	-		LRK54_RS11940	0.28	-1.7
2,647,476	-		LRK54_RS11940	0.28	-0.3
2,647,476	-		LRK54_RS11940	0.28	-0.5
2,647,476	-		LRK54_RS11940	0.28	-0.5
2,647,736	+		LRK54_RS11940	0.50	-0.7
2,647,736	+		LRK54_RS11940	0.50	-1.9
2,647,736	+		LRK54_RS11940	0.50	-0.8
2,647,736	+		LRK54_RS11940	0.50	+1.1
2,647,736	+		LRK54_RS11940	0.50	-1.1
2,647,736	+		LRK54_RS11940	0.50	+1.8
2,647,736	+		LRK54_RS11940	0.50	+0.0
2,647,736	+		LRK54_RS11940	0.50	+0.1
2,647,737	-		LRK54_RS11940	0.50	-1.9
2,647,737	-		LRK54_RS11940	0.50	-0.7
2,647,737	-		LRK54_RS11940	0.50	+1.3
2,647,737	-		LRK54_RS11940	0.50	-2.4
2,647,737	-		LRK54_RS11940	0.50	-0.4
2,647,737	-		LRK54_RS11940	0.50	+2.1
2,647,737	-		LRK54_RS11940	0.50	-0.5
2,647,737	-		LRK54_RS11940	0.50	+1.9
2,647,757	+		LRK54_RS11940	0.52	-0.9
2,647,757	+		LRK54_RS11940	0.52	-1.7
2,647,757	+		LRK54_RS11940	0.52	-1.7
2,647,757	+		LRK54_RS11940	0.52	+2.3
2,647,758	-		LRK54_RS11940	0.52	-1.8
2,647,758	-		LRK54_RS11940	0.52	+1.1
2,647,758	-		LRK54_RS11940	0.52	-0.9
2,647,758	-		LRK54_RS11940	0.52	+3.1
2,647,758	-		LRK54_RS11940	0.52	+0.8
2,647,758	-		LRK54_RS11940	0.52	-0.4
2,647,758	-		LRK54_RS11940	0.52	-1.5
2,647,773	+		LRK54_RS11940	0.54	+1.4
2,647,773	+		LRK54_RS11940	0.54	-1.1
2,647,773	+		LRK54_RS11940	0.54	-1.5
2,647,773	+		LRK54_RS11940	0.54	-0.9
2,647,773	+		LRK54_RS11940	0.54	+2.4
2,647,773	+		LRK54_RS11940	0.54	+0.5
2,647,773	+		LRK54_RS11940	0.54	-0.7
2,647,774	-		LRK54_RS11940	0.54	+0.1
2,647,774	-		LRK54_RS11940	0.54	-2.6
2,647,774	-		LRK54_RS11940	0.54	+0.6
2,647,774	-		LRK54_RS11940	0.54	-0.5
2,647,774	-		LRK54_RS11940	0.54	-0.7
2,647,781	+		LRK54_RS11940	0.54	-1.1
2,647,781	+		LRK54_RS11940	0.54	-2.1
2,647,781	+		LRK54_RS11940	0.54	+0.5
2,647,781	+		LRK54_RS11940	0.54	-3.2
2,647,781	+		LRK54_RS11940	0.54	-0.3
2,647,781	+		LRK54_RS11940	0.54	-0.3
2,647,781	+		LRK54_RS11940	0.54	-0.5
2,647,781	+		LRK54_RS11940	0.54	+1.1
2,647,781	+		LRK54_RS11940	0.54	-0.2
2,647,781	+		LRK54_RS11940	0.54	+2.1
2,647,782	-		LRK54_RS11940	0.54	+1.3
2,647,782	-		LRK54_RS11940	0.54	+0.7
2,647,782	-		LRK54_RS11940	0.54	+0.3
2,647,782	-		LRK54_RS11940	0.54	+1.2
2,647,782	-		LRK54_RS11940	0.54	-2.5
2,647,782	-		LRK54_RS11940	0.54	-0.7
2,647,782	-		LRK54_RS11940	0.54	-0.3
2,647,782	-		LRK54_RS11940	0.54	-2.1
2,647,782	-		LRK54_RS11940	0.54	+1.9
2,647,782	-		LRK54_RS11940	0.54	+0.6
2,647,782	-		LRK54_RS11940	0.54	-0.5
2,647,821	+		LRK54_RS11940	0.58	-0.5
2,648,193	+		LRK54_RS11940	0.90	+2.4
2,648,194	-		LRK54_RS11940	0.90	+1.5
2,648,287	+				-3.5
2,648,287	+				-0.6
2,648,289	-				+1.5
2,648,595	+		LRK54_RS11945	0.20	+0.7
2,648,595	+		LRK54_RS11945	0.20	-0.5
2,648,595	+		LRK54_RS11945	0.20	-0.0
2,648,595	+		LRK54_RS11945	0.20	-0.1
2,648,595	+		LRK54_RS11945	0.20	+0.5
2,648,595	+		LRK54_RS11945	0.20	+0.1
2,648,596	-		LRK54_RS11945	0.21	+0.0
2,648,596	-		LRK54_RS11945	0.21	+0.7
2,649,072	+		LRK54_RS11945	0.57	-1.0
2,649,072	+		LRK54_RS11945	0.57	-0.7
2,649,072	+		LRK54_RS11945	0.57	+1.6
2,649,073	-		LRK54_RS11945	0.57	-2.9
2,649,198	+		LRK54_RS11945	0.66	+0.1
2,649,198	+		LRK54_RS11945	0.66	-0.5
2,649,198	+		LRK54_RS11945	0.66	+2.0
2,649,198	+		LRK54_RS11945	0.66	+0.9
2,649,198	+		LRK54_RS11945	0.66	-2.8
2,649,198	+		LRK54_RS11945	0.66	-1.3
2,649,198	+		LRK54_RS11945	0.66	-1.6
2,649,198	+		LRK54_RS11945	0.66	-1.9
2,649,199	-		LRK54_RS11945	0.66	-1.7
2,649,199	-		LRK54_RS11945	0.66	+0.1
2,649,199	-		LRK54_RS11945	0.66	-0.0
2,649,199	-		LRK54_RS11945	0.66	-1.0
2,649,199	-		LRK54_RS11945	0.66	+0.7
2,649,199	-		LRK54_RS11945	0.66	-0.1
2,649,199	-		LRK54_RS11945	0.66	-2.8
2,649,199	-		LRK54_RS11945	0.66	-1.6
2,649,199	-		LRK54_RS11945	0.66	-0.3
2,649,201	+		LRK54_RS11945	0.66	-0.1
2,649,201	+		LRK54_RS11945	0.66	+0.3
2,649,201	+		LRK54_RS11945	0.66	-0.7
2,649,201	+		LRK54_RS11945	0.66	-2.0
2,649,201	+		LRK54_RS11945	0.66	-0.7
2,649,201	+		LRK54_RS11945	0.66	+0.3
2,649,201	+		LRK54_RS11945	0.66	-3.1
2,649,201	+		LRK54_RS11945	0.66	-0.9
2,649,201	+		LRK54_RS11945	0.66	-0.5
2,649,201	+		LRK54_RS11945	0.66	-0.9
2,649,201	+		LRK54_RS11945	0.66	-0.3
2,649,201	+		LRK54_RS11945	0.66	-0.2
2,649,201	+		LRK54_RS11945	0.66	-1.3
2,649,201	+		LRK54_RS11945	0.66	-0.3
2,649,201	+		LRK54_RS11945	0.66	+1.9
2,649,201	+		LRK54_RS11945	0.66	-0.7
2,649,201	+		LRK54_RS11945	0.66	-2.5
2,649,201	+		LRK54_RS11945	0.66	-0.5
2,649,202	-		LRK54_RS11945	0.66	-0.3
2,649,202	-		LRK54_RS11945	0.66	+0.7
2,649,202	-		LRK54_RS11945	0.66	-2.0
2,649,202	-		LRK54_RS11945	0.66	-2.6
2,649,202	-		LRK54_RS11945	0.66	+1.7
2,649,202	-		LRK54_RS11945	0.66	+0.3
2,649,202	-		LRK54_RS11945	0.66	+1.8
2,649,202	-		LRK54_RS11945	0.66	+0.5
2,649,202	-		LRK54_RS11945	0.66	-0.5
2,649,466	-		LRK54_RS11945	0.86	-2.2
2,649,466	-		LRK54_RS11945	0.86	-0.7
2,649,642	+				+1.1
2,649,642	+				-0.8
2,649,643	-				+0.0
2,649,643	-				+0.2
2,649,734	+				-0.8
2,649,734	+				+1.6
2,649,734	+				+1.1
2,649,735	-				-0.6
2,649,735	-				-1.3
2,649,735	-				-1.1
2,649,735	-				-0.7
2,649,735	-				-0.9
2,649,735	-				-0.3
2,649,755	+				-1.0
2,649,755	+				+0.1
2,649,755	+				+0.4
2,649,755	+				+1.2
2,649,755	+				+0.2
2,649,755	+				+0.1
2,649,755	+				-3.0
2,649,755	+				+2.4
2,649,755	+				-0.5
2,649,755	+				+0.9
2,649,755	+				-1.1
2,649,755	+				+0.5
2,649,755	+				-1.9
2,649,755	+				-1.0
2,649,755	+				+0.1
2,649,755	+				-0.7
2,649,756	-				-2.2
2,649,756	-				-3.5
2,649,756	-				-1.4
2,649,756	-				-0.4
2,649,756	-				-0.3
2,649,756	-				+2.7
2,649,756	-				-2.0
2,649,756	-				+1.5
2,649,756	-				+1.3
2,649,756	-				-1.7
2,649,756	-				-1.1
2,649,756	-				+0.7
2,649,756	-				+0.1
2,649,756	-				-2.1
2,649,756	-				+1.0
2,649,756	-				+0.5
2,649,756	-				+0.1
2,649,830	+				-3.1
2,649,830	+				-0.3
2,649,830	+				-1.3
2,649,830	+				-0.8
2,649,926	+		LRK54_RS11950	0.14	+1.5
2,649,926	+		LRK54_RS11950	0.14	+2.6
2,649,926	+		LRK54_RS11950	0.14	+0.1
2,649,926	+		LRK54_RS11950	0.14	-0.4
2,649,926	+		LRK54_RS11950	0.14	+1.4
2,649,926	+		LRK54_RS11950	0.14	-0.4
2,649,926	+		LRK54_RS11950	0.14	-0.4
2,649,927	-		LRK54_RS11950	0.14	-1.9
2,649,927	-		LRK54_RS11950	0.14	+1.1
2,649,927	-		LRK54_RS11950	0.14	+0.7
2,649,927	-		LRK54_RS11950	0.14	-0.3
2,649,927	-		LRK54_RS11950	0.14	+0.5
2,649,983	+		LRK54_RS11950	0.18	+2.1
2,649,983	+		LRK54_RS11950	0.18	-1.8
2,649,983	+		LRK54_RS11950	0.18	-0.6
2,649,984	-		LRK54_RS11950	0.18	-1.8
2,649,984	-		LRK54_RS11950	0.18	+1.3
2,649,984	-		LRK54_RS11950	0.18	+1.2
2,649,984	-		LRK54_RS11950	0.18	+1.4
2,649,984	-		LRK54_RS11950	0.18	-0.3
2,650,046	+		LRK54_RS11950	0.23	-0.3
2,650,046	+		LRK54_RS11950	0.23	+0.9
2,650,047	-		LRK54_RS11950	0.23	-1.0
2,650,172	+		LRK54_RS11950	0.32	+0.4
2,650,172	+		LRK54_RS11950	0.32	+2.4
2,650,289	+		LRK54_RS11950	0.40	-0.7
2,650,289	+		LRK54_RS11950	0.40	+0.6
2,650,289	+		LRK54_RS11950	0.40	-0.4
2,650,289	+		LRK54_RS11950	0.40	-0.9
2,650,289	+		LRK54_RS11950	0.40	-1.3
2,650,289	+		LRK54_RS11950	0.40	-0.6
2,650,289	+		LRK54_RS11950	0.40	-2.7
2,650,289	+		LRK54_RS11950	0.40	-0.0
2,650,289	+		LRK54_RS11950	0.40	-0.7
2,650,289	+		LRK54_RS11950	0.40	+0.4
2,650,289	+		LRK54_RS11950	0.40	-0.6
2,650,289	+		LRK54_RS11950	0.40	+0.1
2,650,289	+		LRK54_RS11950	0.40	+0.1
2,650,289	+		LRK54_RS11950	0.40	-1.6
2,650,289	+		LRK54_RS11950	0.40	-1.4
2,650,289	+		LRK54_RS11950	0.40	+0.5
2,650,289	+		LRK54_RS11950	0.40	+0.6
2,650,289	+		LRK54_RS11950	0.40	-1.3
2,650,289	+		LRK54_RS11950	0.40	-3.5
2,650,290	-		LRK54_RS11950	0.40	-0.2
2,650,290	-		LRK54_RS11950	0.40	-4.3
2,650,290	-		LRK54_RS11950	0.40	-0.6
2,650,290	-		LRK54_RS11950	0.40	+2.1
2,650,290	-		LRK54_RS11950	0.40	+0.5
2,650,290	-		LRK54_RS11950	0.40	+0.1
2,650,290	-		LRK54_RS11950	0.40	-0.1
2,650,290	-		LRK54_RS11950	0.40	+0.1
2,650,290	-		LRK54_RS11950	0.40	-2.2
2,650,290	-		LRK54_RS11950	0.40	+2.4
2,650,290	-		LRK54_RS11950	0.40	+1.6
2,650,290	-		LRK54_RS11950	0.40	-0.5
2,650,290	-		LRK54_RS11950	0.40	+1.5
2,650,293	+		LRK54_RS11950	0.40	+1.5
2,650,293	+		LRK54_RS11950	0.40	-1.3
2,650,293	+		LRK54_RS11950	0.40	-1.5
2,650,293	+		LRK54_RS11950	0.40	+0.7
2,650,293	+		LRK54_RS11950	0.40	-1.6
2,650,293	+		LRK54_RS11950	0.40	-1.5
2,650,293	+		LRK54_RS11950	0.40	-1.6
2,650,293	+		LRK54_RS11950	0.40	-1.3
2,650,293	+		LRK54_RS11950	0.40	-0.7
2,650,293	+		LRK54_RS11950	0.40	-0.7
2,650,293	+		LRK54_RS11950	0.40	-0.8
2,650,293	+		LRK54_RS11950	0.40	-1.6
2,650,294	-		LRK54_RS11950	0.40	+0.5
2,650,294	-		LRK54_RS11950	0.40	-1.7
2,650,294	-		LRK54_RS11950	0.40	-1.4
2,650,294	-		LRK54_RS11950	0.40	-0.5
2,650,294	-		LRK54_RS11950	0.40	-1.7
2,650,294	-		LRK54_RS11950	0.40	+0.3
2,650,294	-		LRK54_RS11950	0.40	-0.2
2,650,294	-		LRK54_RS11950	0.40	-0.7
2,650,294	-		LRK54_RS11950	0.40	-0.3
2,650,294	-		LRK54_RS11950	0.40	-2.8
2,650,294	-		LRK54_RS11950	0.40	+2.2
2,650,294	-		LRK54_RS11950	0.40	-1.8
2,650,294	-		LRK54_RS11950	0.40	+1.1
2,650,294	-		LRK54_RS11950	0.40	-0.1
2,650,294	-		LRK54_RS11950	0.40	-0.3
2,650,350	-		LRK54_RS11950	0.44	-2.7
2,650,350	-		LRK54_RS11950	0.44	+0.3
2,650,350	-		LRK54_RS11950	0.44	-1.2
2,650,394	+		LRK54_RS11950	0.48	-0.9
2,650,394	+		LRK54_RS11950	0.48	-0.9
2,650,394	+		LRK54_RS11950	0.48	+0.4
2,650,395	-		LRK54_RS11950	0.48	-0.3
2,650,395	-		LRK54_RS11950	0.48	-0.1
2,650,395	-		LRK54_RS11950	0.48	-0.5
2,650,395	-		LRK54_RS11950	0.48	-3.1
2,650,395	-		LRK54_RS11950	0.48	-2.8
2,650,500	+		LRK54_RS11950	0.55	-0.7
2,650,500	+		LRK54_RS11950	0.55	+0.4