Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11810

Experiment: D-Glucose-6-Phosphate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate 20 mM
2,616,385	+		LRK54_RS11805	0.64	-0.4
2,616,385	+		LRK54_RS11805	0.64	-2.7
2,616,385	+		LRK54_RS11805	0.64	-0.5
2,616,386	-		LRK54_RS11805	0.64	-0.7
2,616,386	-		LRK54_RS11805	0.64	+1.6
2,616,386	-		LRK54_RS11805	0.64	-0.3
2,616,386	-		LRK54_RS11805	0.64	+0.5
2,616,386	-		LRK54_RS11805	0.64	+1.7
2,616,523	+		LRK54_RS11805	0.70	+0.1
2,616,523	+		LRK54_RS11805	0.70	-0.5
2,616,523	+		LRK54_RS11805	0.70	+1.1
2,616,523	+		LRK54_RS11805	0.70	-0.6
2,616,523	+		LRK54_RS11805	0.70	+0.1
2,616,523	+		LRK54_RS11805	0.70	-1.1
2,616,523	+		LRK54_RS11805	0.70	-1.2
2,616,523	+		LRK54_RS11805	0.70	-0.0
2,616,524	-		LRK54_RS11805	0.71	+1.4
2,616,524	-		LRK54_RS11805	0.71	+0.1
2,616,524	-		LRK54_RS11805	0.71	-1.3
2,616,524	-		LRK54_RS11805	0.71	-1.4
2,616,524	-		LRK54_RS11805	0.71	-1.1
2,616,856	+		LRK54_RS11805	0.86	+1.1
2,616,856	+		LRK54_RS11805	0.86	-1.0
2,616,856	+		LRK54_RS11805	0.86	-0.7
2,616,856	+		LRK54_RS11805	0.86	-2.9
2,616,856	+		LRK54_RS11805	0.86	+2.5
2,616,856	+		LRK54_RS11805	0.86	-1.8
2,616,857	-		LRK54_RS11805	0.86	+0.1
2,616,857	-		LRK54_RS11805	0.86	-1.2
2,616,857	-		LRK54_RS11805	0.86	+0.5
2,617,005	+				-0.1
2,617,132	+				-0.3
2,617,132	+				-0.3
2,617,133	-				+2.7
2,617,133	-				-0.5
2,617,133	-				+1.1
2,617,165	+				-2.2
2,617,165	+				+0.6
2,617,165	+				+0.5
2,617,165	+				+0.0
2,617,165	+				-2.2
2,617,165	+				-0.2
2,617,165	+				+1.0
2,617,165	+				+1.5
2,617,165	+				+0.1
2,617,165	+				-1.0
2,617,165	+				+1.7
2,617,165	+				-1.8
2,617,165	+				-1.3
2,617,165	+				-0.3
2,617,165	+				-2.8
2,617,165	+				-2.7
2,617,165	+				+0.1
2,617,165	+				+1.6
2,617,166	-				+2.7
2,617,166	-				-0.1
2,617,166	-				-0.9
2,617,166	-				-1.3
2,617,166	-				+1.0
2,617,166	-				+3.1
2,617,166	-				-1.7
2,617,166	-				+0.1
2,617,166	-				+1.8
2,617,166	-				-1.9
2,617,166	-				-0.3
2,617,166	-				+0.5
2,617,166	-				-1.5
2,617,166	-				-1.5
2,617,166	-				+2.1
2,617,166	-				-2.7
2,617,166	-				-2.0
2,617,166	-				-2.8
2,617,166	-				+0.1
2,617,166	-				+2.1
2,617,166	-				+1.0
2,617,166	-				-2.3
2,617,166	-				-0.3
2,617,166	-				-0.5
2,617,266	+				+0.8
2,617,266	+				+0.1
2,617,266	+				-1.6
2,617,267	-				+0.7
2,617,267	-				+0.2
2,617,267	-				-0.1
2,617,267	-				-2.0
2,617,267	-				-1.1
2,617,267	-				-0.7
2,617,295	+		LRK54_RS11810	0.10	-0.0
2,617,295	+		LRK54_RS11810	0.10	+2.5
2,617,296	-		LRK54_RS11810	0.11	-1.3
2,617,876	-		LRK54_RS11810	0.73	-0.3
2,617,876	-		LRK54_RS11810	0.73	-2.0
2,617,876	-		LRK54_RS11810	0.73	+0.5
2,617,876	-		LRK54_RS11810	0.73	-1.5
2,617,876	-		LRK54_RS11810	0.73	-0.2
2,617,876	-		LRK54_RS11810	0.73	+1.1
2,617,876	-		LRK54_RS11810	0.73	-0.5
2,617,876	-		LRK54_RS11810	0.73	+0.2
2,617,876	-		LRK54_RS11810	0.73	-0.7
2,617,876	-		LRK54_RS11810	0.73	-1.2
2,618,434	+				-1.6
2,618,455	+				+2.3
2,618,455	+				+0.5
2,618,455	+				-0.5
2,618,455	+				-1.6
2,618,455	+				+1.7
2,618,455	+				+2.1
2,618,455	+				+0.3
2,618,455	+				+0.5
2,618,455	+				-0.5
2,618,455	+				-0.5
2,618,455	+				+0.1
2,618,455	+				+0.1
2,618,455	+				-0.6
2,618,455	+				+2.6
2,618,455	+				+1.6
2,618,455	+				+0.7
2,618,455	+				+0.6
2,618,455	+				-0.5
2,618,456	-				+0.5
2,618,456	-				-1.6
2,618,456	-				-2.2
2,618,456	-				+1.5
2,618,456	-				+1.0
2,618,456	-				-0.8
2,618,456	-				-0.3
2,618,456	-				-1.9
2,618,456	-				+0.5
2,618,456	-				-0.3
2,618,456	-				-3.1
2,618,456	-				-1.3
2,618,456	-				-1.7
2,618,456	-				+2.1
2,618,456	-				+0.1
2,618,456	-				-0.7
2,618,595	+				+0.1
2,618,720	+				+2.2
2,618,720	+				+2.2
2,618,720	+				+1.2
2,618,720	+				+3.1
2,618,720	+				+0.5
2,618,720	+				-0.3
2,618,720	+				+3.3
2,618,720	+				+1.1
2,618,720	+				-1.3
2,618,720	+				-0.3
2,618,720	+				-0.9
2,618,720	+				-1.4
2,618,720	+				-0.5
2,618,720	+				-1.3
2,618,720	+				+0.5
2,618,720	+				+0.5
2,618,720	+				+0.3
2,618,720	+				-1.3
2,618,720	+				-1.6
2,618,720	+				-0.9
2,618,720	+				-1.4
2,618,720	+				+0.3
2,618,720	+				-0.6
2,618,720	+				+0.7
2,618,720	+				-2.9
2,618,720	+				-0.7
2,618,720	+				-1.1
2,618,720	+				-0.9
2,618,720	+				-0.6
2,618,720	+				+1.6
2,618,720	+				-0.5
2,618,720	+				+0.0
2,618,720	+				-0.8
2,618,720	+				-1.9
2,618,720	+				-1.6
2,618,720	+				-0.3
2,618,720	+				+0.8
2,618,720	+				-2.5
2,618,720	+				-1.1
2,618,720	+				-0.9
2,618,720	+				-0.3
2,618,720	+				-1.7
2,618,720	+				+1.5
2,618,720	+				-2.2
2,618,720	+				-2.3
2,618,720	+				+0.2
2,618,720	+				-1.7
2,618,720	+				-1.0
2,618,720	+				-0.9
2,618,720	+				+0.9
2,618,720	+				-1.6
2,618,720	+				+1.5
2,618,720	+				-0.9
2,618,720	+				+0.9
2,618,720	+				+1.7
2,618,720	+				-1.9
2,618,720	+				-3.2
2,618,720	+				-1.1
2,618,720	+				-1.7
2,618,720	+				-1.4
2,618,720	+				-2.0
2,618,720	+				+0.5
2,618,720	+				-0.9
2,618,720	+				+0.1
2,618,720	+				+0.2
2,618,720	+				+1.7
2,618,720	+				-2.1
2,618,720	+				-0.5
2,618,721	-				+0.1
2,618,721	-				-1.5
2,618,721	-				+0.4
2,618,721	-				+0.5
2,618,721	-				+0.9
2,618,721	-				-0.0
2,618,721	-				+2.1
2,618,721	-				+0.1
2,618,721	-				-2.1
2,618,721	-				-0.0
2,618,721	-				-0.8
2,618,721	-				-0.9
2,618,721	-				+1.1
2,618,721	-				+0.1
2,618,721	-				+0.1
2,618,721	-				+0.1
2,618,721	-				-1.6
2,618,721	-				+0.8
2,618,721	-				-0.7
2,618,721	-				+1.2
2,618,721	-				-0.6
2,618,721	-				-0.2
2,618,721	-				-0.1
2,618,721	-				+1.5
2,618,721	-				-0.1
2,618,721	-				+0.9
2,618,721	-				+0.7
2,618,721	-				+0.5
2,618,721	-				+1.1
2,618,721	-				+0.0
2,618,721	-				+1.5
2,618,721	-				+2.6
2,618,721	-				-1.1
2,618,721	-				-0.7
2,618,721	-				-1.1
2,618,721	-				+1.3
2,618,721	-				+1.2
2,618,721	-				+0.7
2,618,721	-				+0.5
2,618,721	-				-0.4
2,618,721	-				-0.0
2,618,721	-				-0.3
2,618,721	-				+0.7
2,618,721	-				+1.5
2,618,721	-				+0.5
2,618,721	-				-1.3
2,618,721	-				+0.6
2,618,721	-				-0.3
2,618,721	-				+0.4
2,618,721	-				-0.1
2,618,721	-				+0.5
2,618,721	-				-1.6
2,618,721	-				-0.5
2,618,721	-				-0.5
2,618,721	-				+1.2
2,618,721	-				+0.1
2,618,721	-				-0.3
2,618,721	-				-1.3
2,618,721	-				-0.2
2,618,844	+				-0.6
2,618,844	+				-0.5
2,618,844	+				-0.5
2,618,844	+				+1.1
2,618,844	+				-1.4
2,618,844	+				+0.5
2,618,844	+				-1.4
2,618,844	+				+0.1
2,618,844	+				-1.5
2,618,844	+				+0.3
2,618,844	+				-0.5
2,618,845	-				+0.7
2,618,845	-				+2.1
2,618,845	-				+0.5
2,618,845	-				+0.1
2,618,845	-				+0.6
2,618,845	-				-1.0
2,618,845	-				-0.2
2,618,868	+		LRK54_RS11820	0.10	+0.2
2,618,868	+		LRK54_RS11820	0.10	-1.4
2,618,868	+		LRK54_RS11820	0.10	-1.6
2,618,868	+		LRK54_RS11820	0.10	-0.7
2,618,868	+		LRK54_RS11820	0.10	-1.4
2,618,868	+		LRK54_RS11820	0.10	-0.9
2,618,868	+		LRK54_RS11820	0.10	-1.7
2,618,868	+		LRK54_RS11820	0.10	+0.4
2,618,868	+		LRK54_RS11820	0.10	-0.5
2,618,868	+		LRK54_RS11820	0.10	-2.5
2,618,868	+		LRK54_RS11820	0.10	-0.3
2,618,868	+		LRK54_RS11820	0.10	+0.6
2,618,868	+		LRK54_RS11820	0.10	-1.4
2,618,868	+		LRK54_RS11820	0.10	-0.9
2,618,868	+		LRK54_RS11820	0.10	+0.9
2,618,868	+		LRK54_RS11820	0.10	+0.6
2,618,868	+		LRK54_RS11820	0.10	-1.5
2,618,869	-		LRK54_RS11820	0.10	-2.4
2,618,869	-		LRK54_RS11820	0.10	-1.7
2,618,869	-		LRK54_RS11820	0.10	-0.9
2,618,869	-		LRK54_RS11820	0.10	-0.3
2,618,869	-		LRK54_RS11820	0.10	-0.6
2,618,869	-		LRK54_RS11820	0.10	-0.3
2,618,869	-		LRK54_RS11820	0.10	+0.5
2,618,869	-		LRK54_RS11820	0.10	+1.8
2,618,869	-		LRK54_RS11820	0.10	-1.8
2,618,869	-		LRK54_RS11820	0.10	-1.5
2,618,869	-		LRK54_RS11820	0.10	+0.5
2,618,869	-		LRK54_RS11820	0.10	+2.7
2,618,869	-		LRK54_RS11820	0.10	-0.3
2,618,869	-		LRK54_RS11820	0.10	+1.9
2,618,869	-		LRK54_RS11820	0.10	-1.1
2,618,880	+		LRK54_RS11820	0.11	-0.3
2,618,916	+		LRK54_RS11820	0.14	-0.6
2,618,916	+		LRK54_RS11820	0.14	+0.1
2,618,916	+		LRK54_RS11820	0.14	-0.3
2,618,916	+		LRK54_RS11820	0.14	+2.1
2,618,916	+		LRK54_RS11820	0.14	-1.9
2,618,916	+		LRK54_RS11820	0.14	+0.7
2,618,916	+		LRK54_RS11820	0.14	-1.1
2,618,916	+		LRK54_RS11820	0.14	+1.4
2,618,916	+		LRK54_RS11820	0.14	+1.2
2,618,916	+		LRK54_RS11820	0.14	+0.4
2,618,916	+		LRK54_RS11820	0.14	+0.5
2,618,916	+		LRK54_RS11820	0.14	-2.0
2,618,916	+		LRK54_RS11820	0.14	+1.1
2,618,916	+		LRK54_RS11820	0.14	+3.1
2,618,916	+		LRK54_RS11820	0.14	-0.3
2,618,916	+		LRK54_RS11820	0.14	-0.7
2,618,916	+		LRK54_RS11820	0.14	-0.3
2,618,916	+		LRK54_RS11820	0.14	-0.7
2,618,916	+		LRK54_RS11820	0.14	+1.1
2,618,916	+		LRK54_RS11820	0.14	-0.6
2,618,917	-		LRK54_RS11820	0.14	-0.5
2,618,917	-		LRK54_RS11820	0.14	+0.2
2,618,917	-		LRK54_RS11820	0.14	+0.1
2,618,917	-		LRK54_RS11820	0.14	+0.5
2,618,917	-		LRK54_RS11820	0.14	-0.7
2,618,917	-		LRK54_RS11820	0.14	-0.5
2,618,917	-		LRK54_RS11820	0.14	+2.3
2,618,917	-		LRK54_RS11820	0.14	+0.3
2,618,917	-		LRK54_RS11820	0.14	+0.8
2,618,917	-		LRK54_RS11820	0.14	+0.7
2,618,917	-		LRK54_RS11820	0.14	+1.5
2,618,946	+		LRK54_RS11820	0.16	-0.2
2,618,946	+		LRK54_RS11820	0.16	-1.6
2,618,947	-		LRK54_RS11820	0.17	-0.3
2,619,003	+		LRK54_RS11820	0.21	-2.0
2,619,003	+		LRK54_RS11820	0.21	+0.8
2,619,003	+		LRK54_RS11820	0.21	-0.7
2,619,003	+		LRK54_RS11820	0.21	-0.3
2,619,003	+		LRK54_RS11820	0.21	-1.4
2,619,003	+		LRK54_RS11820	0.21	-1.0
2,619,004	-		LRK54_RS11820	0.21	-0.0
2,619,004	-		LRK54_RS11820	0.21	-0.5
2,619,004	-		LRK54_RS11820	0.21	+0.1
2,619,004	-		LRK54_RS11820	0.21	+0.1
2,619,004	-		LRK54_RS11820	0.21	-0.7
2,619,004	-		LRK54_RS11820	0.21	+3.9