Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS04765

Experiment: D-Glucose-6-Phosphate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate 20 mM
1,012,585	+		LRK54_RS04760	0.76	-1.2
1,012,585	+		LRK54_RS04760	0.76	+1.0
1,012,585	+		LRK54_RS04760	0.76	+0.6
1,012,585	+		LRK54_RS04760	0.76	+0.3
1,012,585	+		LRK54_RS04760	0.76	+1.0
1,012,585	+		LRK54_RS04760	0.76	+0.0
1,012,585	+		LRK54_RS04760	0.76	-3.1
1,012,585	+		LRK54_RS04760	0.76	+0.2
1,012,586	-		LRK54_RS04760	0.76	+0.0
1,012,586	-		LRK54_RS04760	0.76	-1.8
1,012,586	-		LRK54_RS04760	0.76	-1.5
1,012,586	-		LRK54_RS04760	0.76	-0.5
1,012,586	-		LRK54_RS04760	0.76	+1.2
1,012,586	-		LRK54_RS04760	0.76	+2.4
1,012,586	-		LRK54_RS04760	0.76	+0.5
1,012,586	-		LRK54_RS04760	0.76	+1.2
1,012,586	-		LRK54_RS04760	0.76	+0.0
1,012,586	-		LRK54_RS04760	0.76	+0.3
1,012,586	-		LRK54_RS04760	0.76	-2.0
1,012,816	+		LRK54_RS04760	0.85	-1.3
1,012,816	+		LRK54_RS04760	0.85	+1.1
1,012,816	+		LRK54_RS04760	0.85	-0.4
1,012,816	+		LRK54_RS04760	0.85	+1.1
1,012,816	+		LRK54_RS04760	0.85	+0.4
1,012,816	+		LRK54_RS04760	0.85	-0.1
1,012,816	+		LRK54_RS04760	0.85	+0.2
1,012,816	+		LRK54_RS04760	0.85	+0.0
1,012,816	+		LRK54_RS04760	0.85	+0.0
1,012,816	+		LRK54_RS04760	0.85	+1.7
1,012,816	+		LRK54_RS04760	0.85	+0.5
1,012,816	+		LRK54_RS04760	0.85	+1.1
1,012,816	+		LRK54_RS04760	0.85	+0.6
1,012,816	+		LRK54_RS04760	0.85	-0.5
1,012,816	+		LRK54_RS04760	0.85	+0.5
1,012,816	+		LRK54_RS04760	0.85	+1.7
1,012,816	+		LRK54_RS04760	0.85	-2.7
1,012,816	+		LRK54_RS04760	0.85	+0.8
1,012,816	+		LRK54_RS04760	0.85	+1.0
1,012,817	-		LRK54_RS04760	0.85	+1.3
1,012,817	-		LRK54_RS04760	0.85	+1.7
1,012,817	-		LRK54_RS04760	0.85	+0.5
1,012,817	-		LRK54_RS04760	0.85	+0.7
1,012,817	-		LRK54_RS04760	0.85	+2.0
1,012,817	-		LRK54_RS04760	0.85	-1.9
1,012,817	-		LRK54_RS04760	0.85	+2.3
1,012,817	-		LRK54_RS04760	0.85	-0.0
1,012,817	-		LRK54_RS04760	0.85	-1.3
1,012,817	-		LRK54_RS04760	0.85	+0.5
1,012,817	-		LRK54_RS04760	0.85	+0.9
1,012,817	-		LRK54_RS04760	0.85	-1.0
1,012,817	-		LRK54_RS04760	0.85	+0.1
1,012,817	-		LRK54_RS04760	0.85	+0.2
1,012,817	-		LRK54_RS04760	0.85	+0.1
1,012,817	-		LRK54_RS04760	0.85	-1.7
1,012,817	-		LRK54_RS04760	0.85	-1.2
1,012,817	-		LRK54_RS04760	0.85	+0.7
1,012,817	-		LRK54_RS04760	0.85	-1.4
1,012,817	-		LRK54_RS04760	0.85	-1.0
1,012,817	-		LRK54_RS04760	0.85	+1.0
1,012,817	-		LRK54_RS04760	0.85	+1.8
1,012,817	-		LRK54_RS04760	0.85	-0.0
1,012,817	-		LRK54_RS04760	0.85	+0.0
1,012,817	-		LRK54_RS04760	0.85	-1.9
1,012,817	-		LRK54_RS04760	0.85	+0.7
1,012,817	-		LRK54_RS04760	0.85	-0.3
1,012,852	+		LRK54_RS04760	0.86	+1.4
1,012,852	+		LRK54_RS04760	0.86	-1.0
1,012,852	+		LRK54_RS04760	0.86	+0.6
1,012,852	+		LRK54_RS04760	0.86	+2.3
1,012,853	-		LRK54_RS04760	0.86	+2.0
1,012,853	-		LRK54_RS04760	0.86	-0.3
1,012,939	+		LRK54_RS04760	0.89	+1.6
1,012,939	+		LRK54_RS04760	0.89	-0.8
1,012,939	+		LRK54_RS04760	0.89	+0.5
1,012,939	+		LRK54_RS04760	0.89	-1.9
1,012,939	+		LRK54_RS04760	0.89	+0.5
1,012,939	+		LRK54_RS04760	0.89	-0.5
1,012,939	+		LRK54_RS04760	0.89	+0.6
1,012,939	+		LRK54_RS04760	0.89	+0.5
1,012,939	+		LRK54_RS04760	0.89	+0.0
1,012,939	+		LRK54_RS04760	0.89	-1.7
1,012,939	+		LRK54_RS04760	0.89	+1.0
1,012,939	+		LRK54_RS04760	0.89	+2.2
1,012,939	+		LRK54_RS04760	0.89	+0.5
1,012,939	+		LRK54_RS04760	0.89	-1.1
1,012,939	+		LRK54_RS04760	0.89	+0.7
1,012,939	+		LRK54_RS04760	0.89	+1.7
1,012,939	+		LRK54_RS04760	0.89	+1.8
1,012,939	+		LRK54_RS04760	0.89	-0.0
1,012,939	+		LRK54_RS04760	0.89	+1.4
1,012,939	+		LRK54_RS04760	0.89	+0.5
1,012,940	-		LRK54_RS04760	0.89	-1.0
1,012,940	-		LRK54_RS04760	0.89	-0.2
1,012,940	-		LRK54_RS04760	0.89	-0.6
1,012,940	-		LRK54_RS04760	0.89	-0.4
1,012,940	-		LRK54_RS04760	0.89	+0.5
1,012,940	-		LRK54_RS04760	0.89	+0.9
1,012,940	-		LRK54_RS04760	0.89	-1.7
1,012,940	-		LRK54_RS04760	0.89	+2.0
1,012,940	-		LRK54_RS04760	0.89	-1.8
1,012,940	-		LRK54_RS04760	0.89	-1.0
1,012,940	-		LRK54_RS04760	0.89	+0.6
1,012,940	-		LRK54_RS04760	0.89	+0.6
1,012,940	-		LRK54_RS04760	0.89	+1.5
1,012,940	-		LRK54_RS04760	0.89	-0.0
1,012,940	-		LRK54_RS04760	0.89	-0.8
1,012,940	-		LRK54_RS04760	0.89	-0.5
1,012,940	-		LRK54_RS04760	0.89	+0.0
1,012,940	-		LRK54_RS04760	0.89	+0.7
1,012,940	-		LRK54_RS04760	0.89	-1.1
1,012,940	-		LRK54_RS04760	0.89	+1.3
1,012,940	-		LRK54_RS04760	0.89	+1.0
1,012,940	-		LRK54_RS04760	0.89	+1.9
1,012,940	-		LRK54_RS04760	0.89	-0.1
1,012,940	-		LRK54_RS04760	0.89	+0.7
1,012,940	-		LRK54_RS04760	0.89	-0.4
1,012,940	-		LRK54_RS04760	0.89	+0.7
1,012,940	-		LRK54_RS04760	0.89	-0.3
1,012,940	-		LRK54_RS04760	0.89	-0.8
1,013,107	+				-1.1
1,013,107	+				-0.5
1,013,107	+				+2.1
1,013,108	-				+1.2
1,013,265	+				-2.2
1,013,265	+				-0.6
1,013,265	+				+1.3
1,013,265	+				-2.2
1,013,265	+				-2.5
1,013,265	+				-0.8
1,013,266	-				+0.6
1,013,266	-				+0.8
1,013,266	-				+0.5
1,013,266	-				-1.2
1,013,266	-				+0.5
1,013,266	-				-0.7
1,013,447	+				+2.0
1,013,447	+				+0.9
1,013,447	+				+1.9
1,013,447	+				+1.2
1,013,447	+				+1.1
1,013,447	+				+1.2
1,013,447	+				-1.3
1,013,447	+				-0.3
1,013,447	+				+0.8
1,013,447	+				-0.5
1,013,447	+				+1.1
1,013,447	+				-0.6
1,013,447	+				+0.5
1,013,448	-				-0.2
1,013,448	-				+0.6
1,013,448	-				+0.1
1,013,448	-				+0.8
1,013,448	-				+0.4
1,013,448	-				+2.0
1,013,448	-				-0.5
1,013,448	-				+0.5
1,013,448	-				+0.0
1,013,448	-				-1.8
1,013,448	-				+1.2
1,013,481	+				+1.4
1,013,482	-				+0.5
1,013,495	+				+1.3
1,013,495	+				-2.1
1,013,495	+				+1.0
1,013,496	-				-1.2
1,013,496	-				-2.7
1,013,496	-				-1.8
1,013,496	-				-0.3
1,013,500	+				+2.3
1,013,500	+				+1.6
1,013,500	+				+2.4
1,013,500	+				+1.0
1,013,500	+				+2.6
1,013,500	+				+4.0
1,013,500	+				+2.6
1,013,501	-				+0.0
1,013,501	-				-3.4
1,013,506	+				-0.2
1,013,549	+				-1.7
1,013,549	+				-1.8
1,013,549	+				-0.7
1,013,549	+				-1.9
1,013,549	+				-1.4
1,013,549	+				-2.7
1,013,550	-				-0.4
1,013,550	-				-3.0
1,013,550	-				-2.5
1,013,550	-				-2.3
1,013,550	-				-3.2
1,013,550	-				-2.5
1,013,739	+		LRK54_RS04765	0.22	-3.6
1,013,739	+		LRK54_RS04765	0.22	-1.0
1,013,739	+		LRK54_RS04765	0.22	-2.5
1,013,739	+		LRK54_RS04765	0.22	-0.5
1,013,739	+		LRK54_RS04765	0.22	-3.1
1,013,739	+		LRK54_RS04765	0.22	-2.5
1,013,739	+		LRK54_RS04765	0.22	-1.3
1,013,739	+		LRK54_RS04765	0.22	-3.3
1,013,739	+		LRK54_RS04765	0.22	-2.2
1,013,739	+		LRK54_RS04765	0.22	-4.1
1,013,739	+		LRK54_RS04765	0.22	+0.0
1,013,739	+		LRK54_RS04765	0.22	-1.0
1,013,740	-		LRK54_RS04765	0.22	-1.1
1,013,740	-		LRK54_RS04765	0.22	-3.6
1,013,740	-		LRK54_RS04765	0.22	-1.3
1,013,740	-		LRK54_RS04765	0.22	-1.1
1,013,740	-		LRK54_RS04765	0.22	-0.9
1,013,740	-		LRK54_RS04765	0.22	-4.6
1,013,740	-		LRK54_RS04765	0.22	-0.5
1,013,740	-		LRK54_RS04765	0.22	-3.2
1,013,740	-		LRK54_RS04765	0.22	-1.4
1,013,740	-		LRK54_RS04765	0.22	-1.0
1,013,740	-		LRK54_RS04765	0.22	-0.5
1,013,740	-		LRK54_RS04765	0.22	-1.3
1,013,740	-		LRK54_RS04765	0.22	-3.3
1,013,740	-		LRK54_RS04765	0.22	+0.0
1,013,740	-		LRK54_RS04765	0.22	-0.8
1,013,837	+		LRK54_RS04765	0.32	-1.0
1,013,837	+		LRK54_RS04765	0.32	-1.4
1,013,837	+		LRK54_RS04765	0.32	-3.0
1,013,837	+		LRK54_RS04765	0.32	-1.3
1,013,838	-		LRK54_RS04765	0.32	-1.0
1,013,838	-		LRK54_RS04765	0.32	-0.1
1,014,150	+		LRK54_RS04765	0.64	+0.0
1,014,150	+		LRK54_RS04765	0.64	-1.0
1,014,150	+		LRK54_RS04765	0.64	-4.2
1,014,150	+		LRK54_RS04765	0.64	-1.8
1,014,150	+		LRK54_RS04765	0.64	-0.1
1,014,150	+		LRK54_RS04765	0.64	-1.7
1,014,150	+		LRK54_RS04765	0.64	-2.2
1,014,150	+		LRK54_RS04765	0.64	-1.2
1,014,150	+		LRK54_RS04765	0.64	-1.7
1,014,150	+		LRK54_RS04765	0.64	+0.0
1,014,150	+		LRK54_RS04765	0.64	-0.1
1,014,150	+		LRK54_RS04765	0.64	-1.1
1,014,150	+		LRK54_RS04765	0.64	-2.4
1,014,150	+		LRK54_RS04765	0.64	-0.3
1,014,150	+		LRK54_RS04765	0.64	-2.4
1,014,150	+		LRK54_RS04765	0.64	-1.9
1,014,151	-		LRK54_RS04765	0.64	-2.0
1,014,151	-		LRK54_RS04765	0.64	-2.0
1,014,151	-		LRK54_RS04765	0.64	-1.1
1,014,151	-		LRK54_RS04765	0.64	+0.0
1,014,151	-		LRK54_RS04765	0.64	-2.0
1,014,151	-		LRK54_RS04765	0.64	+0.0
1,014,151	-		LRK54_RS04765	0.64	-1.7
1,014,151	-		LRK54_RS04765	0.64	-0.8
1,014,151	-		LRK54_RS04765	0.64	-2.5
1,014,151	-		LRK54_RS04765	0.64	-1.9
1,014,151	-		LRK54_RS04765	0.64	-2.7
1,014,151	-		LRK54_RS04765	0.64	-2.7
1,014,151	-		LRK54_RS04765	0.64	-1.0
1,014,151	-		LRK54_RS04765	0.64	-3.1
1,014,151	-		LRK54_RS04765	0.64	+0.0
1,014,151	-		LRK54_RS04765	0.64	+0.5
1,014,151	-		LRK54_RS04765	0.64	-0.0
1,014,151	-		LRK54_RS04765	0.64	-1.0
1,014,151	-		LRK54_RS04765	0.64	-1.1
1,014,151	-		LRK54_RS04765	0.64	-1.0
1,014,151	-		LRK54_RS04765	0.64	-0.3
1,014,151	-		LRK54_RS04765	0.64	+1.0
1,014,151	-		LRK54_RS04765	0.64	-0.8
1,014,396	+		LRK54_RS04765	0.89	-2.0
1,014,397	-		LRK54_RS04765	0.89	-3.0
1,014,397	-		LRK54_RS04765	0.89	-1.4
1,014,556	+				-1.8
1,014,557	-				-2.9
1,014,557	-				+0.5
1,014,557	-				+0.5
1,014,707	-		LRK54_RS04770	0.19	+1.9
1,014,712	+		LRK54_RS04770	0.20	-2.3
1,014,712	+		LRK54_RS04770	0.20	+2.8
1,014,712	+		LRK54_RS04770	0.20	-1.5
1,014,712	+		LRK54_RS04770	0.20	-0.5
1,014,712	+		LRK54_RS04770	0.20	-0.6
1,014,712	+		LRK54_RS04770	0.20	-0.0
1,014,712	+		LRK54_RS04770	0.20	-1.4
1,014,712	+		LRK54_RS04770	0.20	+2.1
1,014,712	+		LRK54_RS04770	0.20	-3.0
1,014,712	+		LRK54_RS04770	0.20	+0.1
1,014,712	+		LRK54_RS04770	0.20	-0.8
1,014,712	+		LRK54_RS04770	0.20	+1.9
1,014,712	+		LRK54_RS04770	0.20	+1.4
1,014,713	-		LRK54_RS04770	0.20	-0.5
1,014,713	-		LRK54_RS04770	0.20	-1.3
1,014,713	-		LRK54_RS04770	0.20	-1.2
1,014,713	-		LRK54_RS04770	0.20	-0.8
1,014,713	-		LRK54_RS04770	0.20	-0.3
1,014,713	-		LRK54_RS04770	0.20	+0.2
1,014,713	-		LRK54_RS04770	0.20	+0.8
1,014,713	-		LRK54_RS04770	0.20	-0.7
1,014,713	-		LRK54_RS04770	0.20	-2.5
1,014,713	-		LRK54_RS04770	0.20	-1.1
1,014,713	-		LRK54_RS04770	0.20	-0.5
1,014,713	-		LRK54_RS04770	0.20	-0.4
1,014,713	-		LRK54_RS04770	0.20	+0.9
1,014,713	-		LRK54_RS04770	0.20	+0.7
1,014,713	-		LRK54_RS04770	0.20	-0.5
1,014,713	-		LRK54_RS04770	0.20	-0.3
1,014,742	+		LRK54_RS04770	0.27	+0.9
1,014,742	+		LRK54_RS04770	0.27	-0.3
1,014,742	+		LRK54_RS04770	0.27	-0.2
1,014,742	+		LRK54_RS04770	0.27	+1.5
1,014,742	+		LRK54_RS04770	0.27	-0.3
1,014,742	+		LRK54_RS04770	0.27	+1.2
1,014,742	+		LRK54_RS04770	0.27	+0.2
1,014,742	+		LRK54_RS04770	0.27	+1.2
1,014,742	+		LRK54_RS04770	0.27	+1.1
1,014,742	+		LRK54_RS04770	0.27	+0.2
1,014,742	+		LRK54_RS04770	0.27	+0.5
1,014,742	+		LRK54_RS04770	0.27	-0.6
1,014,742	+		LRK54_RS04770	0.27	+0.8
1,014,743	-		LRK54_RS04770	0.27	-2.1
1,014,743	-		LRK54_RS04770	0.27	-0.9
1,014,743	-		LRK54_RS04770	0.27	+0.2
1,014,743	-		LRK54_RS04770	0.27	-0.1
1,014,743	-		LRK54_RS04770	0.27	-1.1
1,014,743	-		LRK54_RS04770	0.27	-0.9
1,014,743	-		LRK54_RS04770	0.27	-0.8
1,014,814	+		LRK54_RS04770	0.44	+0.1
1,014,814	+		LRK54_RS04770	0.44	-1.8
1,014,814	+		LRK54_RS04770	0.44	-2.2
1,014,814	+		LRK54_RS04770	0.44	-0.1
1,014,814	+		LRK54_RS04770	0.44	+0.2
1,014,815	-		LRK54_RS04770	0.45	+0.9
1,014,815	-		LRK54_RS04770	0.45	-2.1
1,014,815	-		LRK54_RS04770	0.45	-0.9
1,014,907	+		LRK54_RS04770	0.66	+1.2
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1,014,919	+		LRK54_RS04770	0.69	+1.1
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1,014,919	+		LRK54_RS04770	0.69	-2.1
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1,014,920	-		LRK54_RS04770	0.70	+0.3
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1,015,020	+				-1.1
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