Strain Fitness in Pantoea sp. MT58 around IAI47_14405

Experiment: Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,041,277	-		IAI47_14400	0.63	+2.3
3,041,277	-		IAI47_14400	0.63	-1.6
3,041,292	-		IAI47_14400	0.64	+1.1
3,041,437	+		IAI47_14400	0.69	-1.1
3,041,450	+		IAI47_14400	0.70	-1.2
3,041,451	-		IAI47_14400	0.70	-0.7
3,041,455	+		IAI47_14400	0.70	-1.8
3,041,456	-		IAI47_14400	0.70	+1.5
3,041,462	+		IAI47_14400	0.70	+0.8
3,041,478	-		IAI47_14400	0.71	-0.5
3,041,507	+		IAI47_14400	0.72	-1.7
3,041,521	+		IAI47_14400	0.73	-1.4
3,041,522	-		IAI47_14400	0.73	-1.0
3,041,522	-		IAI47_14400	0.73	-0.6
3,041,599	+		IAI47_14400	0.76	+3.1
3,041,600	-		IAI47_14400	0.76	-1.1
3,041,600	-		IAI47_14400	0.76	+0.2
3,041,600	-		IAI47_14400	0.76	-2.6
3,041,620	+		IAI47_14400	0.77	+0.2
3,041,708	+		IAI47_14400	0.80	-1.0
3,041,708	+		IAI47_14400	0.80	+0.0
3,041,708	+		IAI47_14400	0.80	-0.4
3,041,708	+		IAI47_14400	0.80	-0.3
3,041,708	+		IAI47_14400	0.80	-0.7
3,041,708	+		IAI47_14400	0.80	+0.3
3,041,709	-		IAI47_14400	0.80	-0.8
3,041,821	+		IAI47_14400	0.85	-1.6
3,041,821	+		IAI47_14400	0.85	+2.1
3,041,822	-		IAI47_14400	0.85	+2.8
3,041,822	-		IAI47_14400	0.85	+0.0
3,041,861	+		IAI47_14400	0.86	-2.2
3,041,861	+		IAI47_14400	0.86	-2.3
3,041,861	+		IAI47_14400	0.86	-2.1
3,041,862	-		IAI47_14400	0.86	-0.8
3,041,862	-		IAI47_14400	0.86	-1.0
3,041,948	+		IAI47_14400	0.90	-1.7
3,041,949	-		IAI47_14400	0.90	-1.1
3,041,949	-		IAI47_14400	0.90	+0.7
3,041,949	-		IAI47_14400	0.90	+0.3
3,041,949	-		IAI47_14400	0.90	-1.1
3,041,949	-		IAI47_14400	0.90	-2.8
3,041,954	-		IAI47_14400	0.90	-1.2
3,041,954	-		IAI47_14400	0.90	+2.3
3,042,044	+				-2.0
3,042,044	+				-2.3
3,042,044	+				+0.9
3,042,045	-				-0.8
3,042,045	-				-2.1
3,042,045	-				+0.1
3,042,048	+				+0.0
3,042,048	+				-2.6
3,042,048	+				+3.1
3,042,048	+				+1.9
3,042,049	-				+0.3
3,042,050	+				+0.0
3,042,050	+				-1.6
3,042,051	-				+0.3
3,042,088	-				-1.4
3,042,102	-				+0.7
3,042,102	-				-0.5
3,042,111	-				-0.4
3,042,149	+				-2.5
3,042,149	+				-0.5
3,042,149	+				+1.8
3,042,149	+				-0.0
3,042,150	-				-0.5
3,042,150	-				-0.8
3,042,150	-				+0.3
3,042,150	-				+0.3
3,042,151	+				+1.2
3,042,152	-				-0.6
3,042,204	+				+0.6
3,042,205	-				-0.5
3,042,245	+				+2.2
3,042,246	-				-1.1
3,042,312	+				+0.3
3,042,473	+		IAI47_14405	0.24	+0.6
3,042,473	+		IAI47_14405	0.24	-0.2
3,042,474	-		IAI47_14405	0.25	-0.6
3,042,474	-		IAI47_14405	0.25	+1.3
3,042,474	-		IAI47_14405	0.25	-0.8
3,042,489	+		IAI47_14405	0.26	+1.3
3,042,489	+		IAI47_14405	0.26	+1.0
3,042,489	+		IAI47_14405	0.26	+0.2
3,042,490	-		IAI47_14405	0.26	-0.6
3,042,490	-		IAI47_14405	0.26	+0.0
3,042,490	-		IAI47_14405	0.26	-1.5
3,042,490	-		IAI47_14405	0.26	+0.1
3,042,558	+				+0.0
3,042,558	+		IAI47_14405	0.35	+0.5
3,042,558	+		IAI47_14405	0.35	+1.3
3,042,559	-		IAI47_14405	0.35	+0.1
3,042,559	-		IAI47_14405	0.35	+1.2
3,042,559	-		IAI47_14405	0.35	-0.7
3,042,650	+		IAI47_14405	0.46	+1.6
3,042,650	+		IAI47_14405	0.46	-0.2
3,042,650	+		IAI47_14405	0.46	+0.5
3,042,650	+		IAI47_14405	0.46	+0.8
3,042,651	-		IAI47_14405	0.47	-0.3
3,042,651	-		IAI47_14405	0.47	-0.8
3,042,691	+		IAI47_14405	0.51	-1.9
3,042,692	-		IAI47_14405	0.52	-0.0
3,042,692	-		IAI47_14405	0.52	+0.9
3,042,692	-		IAI47_14405	0.52	-2.4
3,042,703	+		IAI47_14405	0.53	-0.8
3,042,703	+		IAI47_14405	0.53	+0.8
3,042,804	+		IAI47_14405	0.66	+0.6
3,042,804	+		IAI47_14405	0.66	-1.2
3,042,804	+		IAI47_14405	0.66	+0.0
3,042,805	-		IAI47_14405	0.66	+0.8
3,042,815	+		IAI47_14405	0.67	+0.8
3,042,815	+		IAI47_14405	0.67	+2.6
3,042,816	-		IAI47_14405	0.67	-0.7
3,042,816	-		IAI47_14405	0.67	-1.8
3,042,841	-		IAI47_14405	0.70	+0.0
3,042,841	-		IAI47_14405	0.70	-1.2
3,042,841	-		IAI47_14405	0.70	+0.3
3,042,841	-		IAI47_14405	0.70	+1.5
3,042,841	-		IAI47_14405	0.70	-2.0
3,042,909	+		IAI47_14405	0.79	+2.1
3,042,909	+		IAI47_14405	0.79	-0.7
3,042,928	-		IAI47_14405	0.81	+0.3
3,042,945	+		IAI47_14405	0.83	-1.1
3,042,945	+		IAI47_14405	0.83	+0.6
3,042,946	-		IAI47_14405	0.83	+0.1
3,042,946	-		IAI47_14405	0.83	+2.3
3,042,946	-		IAI47_14405	0.83	-0.2
3,042,946	-		IAI47_14405	0.83	+1.2
3,042,946	-		IAI47_14405	0.83	-1.0
3,042,946	-		IAI47_14405	0.83	-1.8
3,043,009	+				-0.7
3,043,009	+				-0.2
3,043,010	-				+1.0
3,043,010	-				+0.3
3,043,010	-				+0.9
3,043,010	-				-0.8
3,043,010	-				+0.0
3,043,039	+				-0.3
3,043,039	+				+2.1
3,043,040	-				+0.0
3,043,040	-				-2.1
3,043,040	-				+0.4
3,043,050	+				+1.3
3,043,050	+				+1.0
3,043,050	+				-3.1
3,043,050	+				+0.4
3,043,050	+				+0.5
3,043,051	-				+1.0
3,043,051	-				-0.3
3,043,051	-				+1.0
3,043,129	+				+1.1
3,043,241	+				-1.3
3,043,242	-				+0.6
3,043,252	+				+0.9
3,043,310	+		IAI47_14410	0.12	-1.1
3,043,310	+		IAI47_14410	0.12	+0.4
3,043,311	-		IAI47_14410	0.12	-0.7
3,043,311	-		IAI47_14410	0.12	+1.3
3,043,386	-		IAI47_14410	0.28	+3.5
3,043,386	-		IAI47_14410	0.28	-0.9
3,043,386	-		IAI47_14410	0.28	+0.1
3,043,386	-		IAI47_14410	0.28	-1.0
3,043,386	-		IAI47_14410	0.28	-1.9
3,043,386	-		IAI47_14410	0.28	+2.1
3,043,386	-		IAI47_14410	0.28	+2.3
3,043,386	-		IAI47_14410	0.28	-2.5
3,043,386	-		IAI47_14410	0.28	-2.5
3,043,387	+		IAI47_14410	0.28	-0.9
3,043,388	-		IAI47_14410	0.28	+2.9
3,043,388	-		IAI47_14410	0.28	-0.1
3,043,388	-		IAI47_14410	0.28	-1.1
3,043,388	-		IAI47_14410	0.28	-1.1
3,043,388	-		IAI47_14410	0.28	+0.6
3,043,388	-		IAI47_14410	0.28	-1.2
3,043,507	+		IAI47_14410	0.53	+1.2
3,043,507	+		IAI47_14410	0.53	+0.0
3,043,507	+		IAI47_14410	0.53	-0.7
3,043,507	+		IAI47_14410	0.53	+1.3
3,043,508	-		IAI47_14410	0.53	+0.8
3,043,544	+		IAI47_14410	0.61	+1.6
3,043,559	-		IAI47_14410	0.64	-0.1
3,043,592	-		IAI47_14410	0.71	-1.1
3,043,592	-		IAI47_14410	0.71	+1.0
3,043,633	+		IAI47_14410	0.79	+0.5
3,043,633	+		IAI47_14410	0.79	-1.4
3,043,633	+		IAI47_14410	0.79	+1.3
3,043,633	+		IAI47_14410	0.79	+0.3
3,043,634	-		IAI47_14410	0.79	-0.2
3,043,645	+		IAI47_14410	0.82	+0.2
3,043,730	+				-0.2
3,043,730	+				-1.4
3,043,731	-				-1.7
3,043,821	+		IAI47_14415	0.11	+0.3
3,043,822	-		IAI47_14415	0.11	+0.2
3,043,822	-		IAI47_14415	0.11	+0.2
3,043,822	-		IAI47_14415	0.11	-0.8
3,043,930	+		IAI47_14415	0.23	-0.1
3,043,930	+		IAI47_14415	0.23	+2.1
3,043,930	+		IAI47_14415	0.23	-2.7
3,043,930	+		IAI47_14415	0.23	+0.3
3,043,930	+		IAI47_14415	0.23	-2.4
3,043,931	-		IAI47_14415	0.23	-1.1
3,043,931	-		IAI47_14415	0.23	+1.5
3,043,939	+		IAI47_14415	0.24	-2.4
3,043,939	+		IAI47_14415	0.24	+0.9
3,043,939	+		IAI47_14415	0.24	-1.6
3,043,939	+		IAI47_14415	0.24	+0.8
3,043,939	+		IAI47_14415	0.24	-0.7
3,043,939	+		IAI47_14415	0.24	-2.0
3,043,939	+		IAI47_14415	0.24	+0.7
3,043,939	+		IAI47_14415	0.24	-0.9
3,043,939	+		IAI47_14415	0.24	-1.1
3,043,939	+		IAI47_14415	0.24	-3.1
3,043,939	+		IAI47_14415	0.24	+2.2
3,043,939	+		IAI47_14415	0.24	-1.3
3,043,939	+		IAI47_14415	0.24	-0.6
3,043,940	-		IAI47_14415	0.24	+1.8
3,043,940	-		IAI47_14415	0.24	+1.3
3,043,940	-		IAI47_14415	0.24	+0.3
3,043,940	-		IAI47_14415	0.24	-0.0
3,043,943	+		IAI47_14415	0.25	+0.3
3,043,943	+		IAI47_14415	0.25	+0.9
3,043,943	+		IAI47_14415	0.25	-0.6
3,043,944	-		IAI47_14415	0.25	+1.3
3,043,944	-		IAI47_14415	0.25	-2.6
3,043,944	-		IAI47_14415	0.25	+3.6
3,043,944	-		IAI47_14415	0.25	+2.2
3,044,049	+		IAI47_14415	0.37	+0.2
3,044,049	+		IAI47_14415	0.37	-1.0
3,044,050	-		IAI47_14415	0.37	+0.1
3,044,052	+		IAI47_14415	0.37	-0.6
3,044,052	+		IAI47_14415	0.37	+1.0
3,044,052	+		IAI47_14415	0.37	-0.7
3,044,052	+		IAI47_14415	0.37	-0.4
3,044,052	+		IAI47_14415	0.37	-1.7
3,044,053	-		IAI47_14415	0.37	+1.4
3,044,053	-		IAI47_14415	0.37	+0.0
3,044,053	-		IAI47_14415	0.37	+2.1
3,044,053	-		IAI47_14415	0.37	+0.9
3,044,053	-		IAI47_14415	0.37	-1.2
3,044,053	-		IAI47_14415	0.37	+0.6
3,044,053	-		IAI47_14415	0.37	-0.7
3,044,053	-		IAI47_14415	0.37	-0.7
3,044,053	-		IAI47_14415	0.37	-1.7
3,044,053	-		IAI47_14415	0.37	+0.5
3,044,080	+		IAI47_14415	0.40	-1.5
3,044,080	+		IAI47_14415	0.40	+0.9
3,044,080	+		IAI47_14415	0.40	-0.7