Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4077

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,208,306	+		Ga0059261_4076	0.31	-3.2
4,208,307	-		Ga0059261_4076	0.31	+0.9
4,208,307	-		Ga0059261_4076	0.31	+0.4
4,208,307	-		Ga0059261_4076	0.31	+1.4
4,208,307	-		Ga0059261_4076	0.31	+1.1
4,208,342	+		Ga0059261_4076	0.35	+0.4
4,208,342	+		Ga0059261_4076	0.35	+2.1
4,208,343	-		Ga0059261_4076	0.35	-0.2
4,208,343	-		Ga0059261_4076	0.35	+1.7
4,208,343	-		Ga0059261_4076	0.35	-0.7
4,208,343	-		Ga0059261_4076	0.35	-1.2
4,208,343	-		Ga0059261_4076	0.35	-0.9
4,208,343	-		Ga0059261_4076	0.35	+0.8
4,208,343	-		Ga0059261_4076	0.35	+1.7
4,208,420	+		Ga0059261_4076	0.43	-0.3
4,208,421	-		Ga0059261_4076	0.43	-0.0
4,208,421	-		Ga0059261_4076	0.43	-1.7
4,208,555	+		Ga0059261_4076	0.58	-0.8
4,208,555	+				+0.4
4,208,555	+		Ga0059261_4076	0.58	-1.2
4,208,555	+		Ga0059261_4076	0.58	+2.1
4,208,555	+		Ga0059261_4076	0.58	-2.1
4,208,556	-		Ga0059261_4076	0.58	+2.8
4,208,556	-		Ga0059261_4076	0.58	+0.3
4,208,556	-		Ga0059261_4076	0.58	+1.4
4,208,556	-		Ga0059261_4076	0.58	-0.3
4,208,564	-		Ga0059261_4076	0.59	+1.1
4,208,564	-		Ga0059261_4076	0.59	-0.7
4,208,706	-		Ga0059261_4076	0.74	-0.4
4,208,711	+		Ga0059261_4076	0.75	-1.2
4,208,711	+		Ga0059261_4076	0.75	+1.1
4,208,711	+		Ga0059261_4076	0.75	-1.3
4,208,711	+		Ga0059261_4076	0.75	+0.8
4,208,711	+		Ga0059261_4076	0.75	-2.0
4,208,711	+		Ga0059261_4076	0.75	+1.4
4,208,711	+		Ga0059261_4076	0.75	-0.6
4,208,711	+		Ga0059261_4076	0.75	+0.1
4,208,711	+		Ga0059261_4076	0.75	-1.3
4,208,711	+		Ga0059261_4076	0.75	-1.3
4,208,711	+		Ga0059261_4076	0.75	-1.1
4,208,711	+		Ga0059261_4076	0.75	-1.2
4,208,711	+		Ga0059261_4076	0.75	-0.7
4,208,711	+		Ga0059261_4076	0.75	-0.2
4,208,711	+		Ga0059261_4076	0.75	+1.4
4,208,711	+		Ga0059261_4076	0.75	+0.6
4,208,712	-		Ga0059261_4076	0.75	-1.3
4,208,712	-		Ga0059261_4076	0.75	+0.2
4,208,712	-		Ga0059261_4076	0.75	+0.1
4,208,712	-		Ga0059261_4076	0.75	-1.9
4,208,712	-		Ga0059261_4076	0.75	+1.2
4,208,712	-		Ga0059261_4076	0.75	-2.1
4,208,712	-		Ga0059261_4076	0.75	-0.9
4,208,712	-		Ga0059261_4076	0.75	-0.9
4,208,712	-		Ga0059261_4076	0.75	-0.6
4,208,712	-		Ga0059261_4076	0.75	+0.2
4,208,712	-		Ga0059261_4076	0.75	-0.1
4,208,712	-		Ga0059261_4076	0.75	+0.2
4,208,712	-		Ga0059261_4076	0.75	+0.7
4,208,712	-		Ga0059261_4076	0.75	+0.3
4,208,712	-		Ga0059261_4076	0.75	+2.1
4,208,712	-		Ga0059261_4076	0.75	-0.8
4,208,712	-		Ga0059261_4076	0.75	-0.8
4,208,712	-		Ga0059261_4076	0.75	-1.1
4,208,712	-		Ga0059261_4076	0.75	+0.8
4,208,736	+		Ga0059261_4076	0.77	-1.4
4,208,737	-		Ga0059261_4076	0.78	+1.4
4,208,737	-		Ga0059261_4076	0.78	+0.2
4,208,737	-		Ga0059261_4076	0.78	-0.8
4,208,774	+		Ga0059261_4076	0.82	+3.3
4,208,774	+		Ga0059261_4076	0.82	-0.1
4,208,774	+		Ga0059261_4076	0.82	-0.6
4,208,774	+		Ga0059261_4076	0.82	-2.9
4,208,775	-		Ga0059261_4076	0.82	+0.1
4,208,775	-		Ga0059261_4076	0.82	-2.3
4,208,775	-		Ga0059261_4076	0.82	-1.6
4,208,775	-		Ga0059261_4076	0.82	+0.5
4,208,828	+		Ga0059261_4076	0.87	+1.8
4,208,828	+		Ga0059261_4076	0.87	-0.2
4,208,829	-		Ga0059261_4076	0.88	+0.5
4,208,946	+				+1.4
4,208,946	+				-0.7
4,208,946	+				-0.2
4,208,946	+				-0.4
4,208,946	+				+0.1
4,208,947	-				-0.6
4,208,947	-				+0.3
4,208,947	-				+3.6
4,208,947	-				-0.5
4,208,947	-				-0.8
4,208,947	-				-0.5
4,208,947	-				-0.8
4,209,053	+				+1.9
4,209,054	-				+0.4
4,209,054	-				-0.9
4,209,359	+		Ga0059261_4077	0.10	-2.2
4,209,359	+		Ga0059261_4077	0.10	-1.4
4,209,359	+		Ga0059261_4077	0.10	-1.2
4,209,359	+				+3.4
4,209,359	+		Ga0059261_4077	0.10	-1.8
4,209,360	-		Ga0059261_4077	0.10	-0.2
4,209,360	-		Ga0059261_4077	0.10	+0.1
4,209,360	-		Ga0059261_4077	0.10	+0.7
4,209,360	-		Ga0059261_4077	0.10	+1.2
4,209,360	-		Ga0059261_4077	0.10	+1.0
4,209,362	+		Ga0059261_4077	0.10	+1.4
4,209,362	+		Ga0059261_4077	0.10	-0.6
4,209,362	+		Ga0059261_4077	0.10	+0.2
4,209,362	+		Ga0059261_4077	0.10	-0.2
4,209,362	+		Ga0059261_4077	0.10	-0.9
4,209,363	-		Ga0059261_4077	0.11	+1.2
4,209,363	-		Ga0059261_4077	0.11	+0.5
4,209,363	-		Ga0059261_4077	0.11	+1.1
4,209,363	-		Ga0059261_4077	0.11	-0.5
4,209,416	+		Ga0059261_4077	0.16	-1.9
4,209,417	-		Ga0059261_4077	0.16	-1.0
4,209,445	+		Ga0059261_4077	0.18	+0.9
4,209,489	+		Ga0059261_4077	0.22	-2.1
4,209,489	+		Ga0059261_4077	0.22	+0.7
4,209,490	-		Ga0059261_4077	0.23	-0.0
4,209,490	-		Ga0059261_4077	0.23	+0.4
4,209,490	-		Ga0059261_4077	0.23	-1.2
4,209,525	-		Ga0059261_4077	0.26	-2.5
4,209,525	-		Ga0059261_4077	0.26	+1.4
4,209,548	+		Ga0059261_4077	0.28	+1.7
4,209,548	+		Ga0059261_4077	0.28	+0.5
4,209,548	+		Ga0059261_4077	0.28	-0.2
4,209,548	+		Ga0059261_4077	0.28	+0.1
4,209,548	+		Ga0059261_4077	0.28	-1.0
4,209,548	+		Ga0059261_4077	0.28	+3.2
4,209,548	+		Ga0059261_4077	0.28	+0.6
4,209,548	-		Ga0059261_4077	0.28	-0.9
4,209,549	-		Ga0059261_4077	0.28	-0.1
4,209,549	-		Ga0059261_4077	0.28	+1.1
4,209,549	-		Ga0059261_4077	0.28	+1.6
4,209,549	-		Ga0059261_4077	0.28	+0.6
4,209,549	-		Ga0059261_4077	0.28	+1.2
4,209,549	-		Ga0059261_4077	0.28	-0.4
4,209,603	+		Ga0059261_4077	0.33	+0.5
4,209,604	-		Ga0059261_4077	0.33	-1.5
4,209,644	+		Ga0059261_4077	0.37	+0.6
4,209,644	+		Ga0059261_4077	0.37	-0.1
4,209,644	+		Ga0059261_4077	0.37	-0.6
4,209,645	-		Ga0059261_4077	0.37	-0.6
4,209,645	-		Ga0059261_4077	0.37	-3.0
4,209,645	-		Ga0059261_4077	0.37	-2.9
4,209,645	-		Ga0059261_4077	0.37	+2.3
4,209,707	+		Ga0059261_4077	0.43	+1.6
4,209,708	-		Ga0059261_4077	0.43	-0.4
4,209,708	-		Ga0059261_4077	0.43	-0.8
4,209,708	-		Ga0059261_4077	0.43	-0.8
4,209,749	+		Ga0059261_4077	0.47	+0.5
4,209,749	+		Ga0059261_4077	0.47	+3.3
4,209,749	+		Ga0059261_4077	0.47	-0.9
4,209,749	+		Ga0059261_4077	0.47	+0.8
4,209,750	-		Ga0059261_4077	0.47	-0.8
4,209,750	-		Ga0059261_4077	0.47	-0.4
4,209,750	-		Ga0059261_4077	0.47	+4.0
4,209,750	-		Ga0059261_4077	0.47	-0.4
4,209,750	-		Ga0059261_4077	0.47	+0.9
4,209,800	+		Ga0059261_4077	0.52	-0.8
4,209,801	-		Ga0059261_4077	0.52	-0.5
4,209,801	-		Ga0059261_4077	0.52	+0.4
4,209,801	-		Ga0059261_4077	0.52	+3.4
4,209,873	-		Ga0059261_4077	0.59	+1.8
4,209,878	+		Ga0059261_4077	0.59	-0.6
4,209,878	+				+1.1
4,209,878	+		Ga0059261_4077	0.59	-0.8
4,209,879	-		Ga0059261_4077	0.59	+1.0
4,209,911	+		Ga0059261_4077	0.62	-1.4
4,209,911	+		Ga0059261_4077	0.62	-0.9
4,209,911	+		Ga0059261_4077	0.62	+1.1
4,209,911	+		Ga0059261_4077	0.62	+1.6
4,209,911	+		Ga0059261_4077	0.62	-2.5
4,209,911	+		Ga0059261_4077	0.62	-1.4
4,209,911	+		Ga0059261_4077	0.62	-1.0
4,209,911	+		Ga0059261_4077	0.62	-0.8
4,209,911	+		Ga0059261_4077	0.62	-0.8
4,209,911	+		Ga0059261_4077	0.62	-2.1
4,209,911	+		Ga0059261_4077	0.62	+0.6
4,209,911	+		Ga0059261_4077	0.62	-1.2
4,209,911	+		Ga0059261_4077	0.62	+1.4
4,209,911	+		Ga0059261_4077	0.62	-0.4
4,209,911	+		Ga0059261_4077	0.62	+0.8
4,209,911	+		Ga0059261_4077	0.62	+1.7
4,209,912	-		Ga0059261_4077	0.62	+1.2
4,209,912	-		Ga0059261_4077	0.62	-0.7
4,209,912	-		Ga0059261_4077	0.62	-1.2
4,209,912	-		Ga0059261_4077	0.62	+1.5
4,209,912	-		Ga0059261_4077	0.62	-1.0
4,209,912	-		Ga0059261_4077	0.62	+0.5
4,209,913	+		Ga0059261_4077	0.62	+0.7
4,209,914	-		Ga0059261_4077	0.62	-2.0
4,209,924	+		Ga0059261_4077	0.63	+0.1
4,209,924	+		Ga0059261_4077	0.63	-1.4
4,209,924	+		Ga0059261_4077	0.63	+0.8
4,209,925	-		Ga0059261_4077	0.63	-1.4
4,209,925	-		Ga0059261_4077	0.63	+0.4
4,209,964	-		Ga0059261_4077	0.67	-1.5
4,210,005	+		Ga0059261_4077	0.71	+1.0
4,210,006	-		Ga0059261_4077	0.71	+0.4
4,210,095	+		Ga0059261_4077	0.79	+1.0
4,210,095	+		Ga0059261_4077	0.79	+0.5
4,210,095	+		Ga0059261_4077	0.79	+0.4
4,210,096	-		Ga0059261_4077	0.80	-1.7
4,210,096	-		Ga0059261_4077	0.80	-1.3
4,210,096	-		Ga0059261_4077	0.80	-1.6
4,210,096	-		Ga0059261_4077	0.80	-1.6
4,210,143	+		Ga0059261_4077	0.84	-0.6
4,210,143	+		Ga0059261_4077	0.84	+0.2
4,210,143	+		Ga0059261_4077	0.84	-0.5
4,210,143	+		Ga0059261_4077	0.84	+3.5
4,210,144	-		Ga0059261_4077	0.84	-0.2
4,210,144	-		Ga0059261_4077	0.84	+1.4
4,210,144	-		Ga0059261_4077	0.84	-0.8
4,210,144	-		Ga0059261_4077	0.84	-1.2
4,210,144	-		Ga0059261_4077	0.84	-1.5
4,210,190	+		Ga0059261_4077	0.88	-3.5
4,210,190	+		Ga0059261_4077	0.88	-0.3
4,210,191	-		Ga0059261_4077	0.89	+1.2
4,210,191	-		Ga0059261_4077	0.89	+2.9
4,210,191	-		Ga0059261_4077	0.89	-0.4
4,210,241	+				+1.0
4,210,242	-				+1.5
4,210,242	-				-0.0
4,210,250	+				+1.4
4,210,250	+				-1.3
4,210,250	+				-1.9
4,210,250	+				-0.8
4,210,250	+				+0.6
4,210,250	+				+4.3
4,210,250	+				+0.8
4,210,251	-				-1.6
4,210,251	-				-1.8
4,210,251	-				+1.7
4,210,252	+				-1.7
4,210,252	+				+0.8
4,210,252	+				-0.4
4,210,253	-				-1.5
4,210,261	-				+1.2
4,210,261	-				+0.4
4,210,278	+				-0.3
4,210,278	+				+1.7
4,210,278	+				+0.1
4,210,279	-				-0.0
4,210,279	-				-0.8
4,210,279	-				-0.5
4,210,306	+				-0.2
4,210,306	+				-3.2
4,210,306	+				+1.7
4,210,307	-				+0.4
4,210,414	+		Ga0059261_4078	0.14	+1.1
4,210,414	+		Ga0059261_4078	0.14	+1.2
4,210,414	+		Ga0059261_4078	0.14	-1.2
4,210,414	+		Ga0059261_4078	0.14	-1.2
4,210,415	-		Ga0059261_4078	0.14	-2.5
4,210,415	-		Ga0059261_4078	0.14	-0.5
4,210,628	-		Ga0059261_4078	0.40	-0.0
4,210,628	-		Ga0059261_4078	0.40	-0.4
4,210,801	+		Ga0059261_4078	0.62	-0.5
4,210,802	-		Ga0059261_4078	0.62	-1.6
4,210,955	+		Ga0059261_4078	0.81	-1.1
4,210,956	-		Ga0059261_4078	0.81	+0.1
4,210,987	+		Ga0059261_4078	0.85	-0.1
4,210,987	+		Ga0059261_4078	0.85	-1.9
4,210,987	+		Ga0059261_4078	0.85	-1.5
4,210,987	+		Ga0059261_4078	0.85	-1.5
4,210,988	-		Ga0059261_4078	0.85	-0.4
4,210,988	-		Ga0059261_4078	0.85	+0.1
4,210,988	-		Ga0059261_4078	0.85	+4.0
4,210,988	-		Ga0059261_4078	0.85	+1.0
4,210,988	-		Ga0059261_4078	0.85	+1.4
4,211,075	+				-1.1
4,211,075	+				-1.1
4,211,075	+				+2.3
4,211,075	+				+0.3
4,211,075	+				-1.9
4,211,075	+				+1.9
4,211,075	+				-0.8
4,211,076	-				+0.6
4,211,122	-				-0.2
4,211,150	+				-0.4
4,211,191	-				+0.4
4,211,194	+				-1.3
4,211,205	-				+1.4
4,211,229	+				-1.2