Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3953

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,067,141	-		Ga0059261_3952	0.33	-0.1
4,067,161	-		Ga0059261_3952	0.35	+1.4
4,067,426	-		Ga0059261_3952	0.53	+1.0
4,067,426	-		Ga0059261_3952	0.53	+3.2
4,067,463	+		Ga0059261_3952	0.55	+0.4
4,067,463	+		Ga0059261_3952	0.55	-0.2
4,067,464	-		Ga0059261_3952	0.55	+1.4
4,067,464	-		Ga0059261_3952	0.55	+5.5
4,067,492	-		Ga0059261_3952	0.57	-1.1
4,067,679	+		Ga0059261_3952	0.70	+1.5
4,067,679	+		Ga0059261_3952	0.70	+1.4
4,067,679	+		Ga0059261_3952	0.70	-2.1
4,067,679	+		Ga0059261_3952	0.70	+1.0
4,067,679	+		Ga0059261_3952	0.70	+0.2
4,067,679	+		Ga0059261_3952	0.70	-2.2
4,067,679	+		Ga0059261_3952	0.70	-0.1
4,067,679	+		Ga0059261_3952	0.70	+0.8
4,067,679	+		Ga0059261_3952	0.70	-0.9
4,067,680	-		Ga0059261_3952	0.70	-1.9
4,067,680	-		Ga0059261_3952	0.70	-0.4
4,067,680	-		Ga0059261_3952	0.70	+1.2
4,067,680	-		Ga0059261_3952	0.70	-2.0
4,067,680	-		Ga0059261_3952	0.70	-1.3
4,067,680	-		Ga0059261_3952	0.70	+2.4
4,067,735	-		Ga0059261_3952	0.74	+8.0
4,067,789	+		Ga0059261_3952	0.78	+1.4
4,067,789	+		Ga0059261_3952	0.78	-1.1
4,067,789	+		Ga0059261_3952	0.78	+1.7
4,067,789	+		Ga0059261_3952	0.78	-1.1
4,067,789	+		Ga0059261_3952	0.78	-1.2
4,067,789	+				+0.8
4,067,790	-		Ga0059261_3952	0.78	-0.4
4,067,790	-		Ga0059261_3952	0.78	+1.0
4,067,935	+		Ga0059261_3952	0.88	-0.2
4,067,935	+		Ga0059261_3952	0.88	+1.4
4,067,936	-		Ga0059261_3952	0.88	+0.1
4,068,467	+		Ga0059261_3953	0.29	-1.5
4,068,467	+		Ga0059261_3953	0.29	+0.5
4,068,468	-		Ga0059261_3953	0.29	+0.5
4,068,468	-		Ga0059261_3953	0.29	+1.9
4,068,484	+		Ga0059261_3953	0.30	+0.3
4,068,484	+		Ga0059261_3953	0.30	+0.2
4,068,485	-		Ga0059261_3953	0.30	+0.5
4,068,516	+		Ga0059261_3953	0.33	-0.8
4,068,636	+		Ga0059261_3953	0.42	+0.7
4,068,636	+		Ga0059261_3953	0.42	+2.1
4,068,637	-		Ga0059261_3953	0.42	+1.4
4,068,690	+		Ga0059261_3953	0.47	+1.0
4,068,690	+		Ga0059261_3953	0.47	+0.8
4,068,690	+		Ga0059261_3953	0.47	+0.9
4,068,690	+		Ga0059261_3953	0.47	+2.2
4,068,690	+		Ga0059261_3953	0.47	+3.8
4,068,690	+				+1.4
4,068,690	+		Ga0059261_3953	0.47	+2.1
4,068,690	+		Ga0059261_3953	0.47	-0.6
4,068,690	+		Ga0059261_3953	0.47	+0.4
4,068,690	+		Ga0059261_3953	0.47	-2.2
4,068,691	-		Ga0059261_3953	0.47	-1.2
4,068,691	-		Ga0059261_3953	0.47	-1.0
4,068,691	-		Ga0059261_3953	0.47	+0.8
4,068,691	-		Ga0059261_3953	0.47	+0.9
4,068,691	-		Ga0059261_3953	0.47	+0.1
4,068,691	-		Ga0059261_3953	0.47	-1.3
4,068,691	-		Ga0059261_3953	0.47	-0.4
4,068,798	+		Ga0059261_3953	0.56	+0.1
4,068,798	+		Ga0059261_3953	0.56	-0.9
4,068,798	+		Ga0059261_3953	0.56	+1.2
4,068,798	+		Ga0059261_3953	0.56	-2.2
4,068,798	+		Ga0059261_3953	0.56	-0.7
4,068,798	+		Ga0059261_3953	0.56	-2.2
4,068,798	+				+2.4
4,068,798	+		Ga0059261_3953	0.56	-0.8
4,068,798	+		Ga0059261_3953	0.56	+0.6
4,068,799	-		Ga0059261_3953	0.56	+0.4
4,068,799	-		Ga0059261_3953	0.56	+1.9
4,068,799	-		Ga0059261_3953	0.56	+0.8
4,068,799	-		Ga0059261_3953	0.56	-0.0
4,068,799	-		Ga0059261_3953	0.56	+0.8
4,068,799	-		Ga0059261_3953	0.56	-0.5
4,068,834	+		Ga0059261_3953	0.59	-0.9
4,068,834	+		Ga0059261_3953	0.59	+1.4
4,068,834	+		Ga0059261_3953	0.59	+1.3
4,068,834	+		Ga0059261_3953	0.59	-0.6
4,068,834	+		Ga0059261_3953	0.59	-2.0
4,068,834	+		Ga0059261_3953	0.59	+1.4
4,068,834	+		Ga0059261_3953	0.59	-0.3
4,068,835	-		Ga0059261_3953	0.59	+1.3
4,068,835	-		Ga0059261_3953	0.59	+0.1
4,068,835	-		Ga0059261_3953	0.59	+0.1
4,068,835	-		Ga0059261_3953	0.59	-1.2
4,068,835	-		Ga0059261_3953	0.59	-1.1
4,068,835	-		Ga0059261_3953	0.59	-2.7
4,068,926	+		Ga0059261_3953	0.66	+0.7
4,068,926	+		Ga0059261_3953	0.66	-0.1
4,068,927	-		Ga0059261_3953	0.66	-1.2
4,068,927	-		Ga0059261_3953	0.66	-2.1
4,069,368	-				+0.1
4,069,390	+				+1.6
4,069,390	+				+2.1
4,069,390	+				-2.8
4,069,390	+				+1.0
4,069,390	+				-0.2
4,069,390	+				+1.7
4,069,390	+				-0.6
4,069,390	+				-0.0
4,069,391	-				+0.2
4,069,391	-				-1.8
4,069,391	-				+0.4
4,069,391	-				-0.5
4,069,391	-				-1.5
4,069,391	-				+0.9
4,069,391	-				+0.8
4,069,448	+				+0.1
4,069,448	+				-0.9
4,069,448	+				+0.4
4,069,448	+				-0.4
4,069,448	+				+2.9
4,069,448	+				+1.4
4,069,448	+				+0.8
4,069,448	+				-0.3
4,069,448	+				-1.7
4,069,448	+				+0.2
4,069,448	+				+2.4
4,069,449	-				-1.0
4,069,449	-				+1.2
4,069,449	-				+2.4
4,069,449	-				+0.4
4,069,449	-				+2.4
4,069,449	-				-1.4
4,069,449	-				-0.9
4,069,449	-				+0.2
4,069,449	-				+0.8
4,069,624	+		Ga0059261_3954	0.22	-0.4
4,069,624	+		Ga0059261_3954	0.22	+0.2
4,069,624	+		Ga0059261_3954	0.22	-1.4
4,069,624	+		Ga0059261_3954	0.22	+1.8
4,069,624	+		Ga0059261_3954	0.22	+0.6
4,069,625	-		Ga0059261_3954	0.22	+1.5
4,069,625	-		Ga0059261_3954	0.22	+2.4
4,069,625	-		Ga0059261_3954	0.22	-1.3
4,069,625	-		Ga0059261_3954	0.22	-0.0
4,069,625	-		Ga0059261_3954	0.22	-1.3
4,069,648	+		Ga0059261_3954	0.24	-2.1
4,069,648	+		Ga0059261_3954	0.24	+0.3
4,069,648	+		Ga0059261_3954	0.24	+1.6
4,069,648	+		Ga0059261_3954	0.24	+1.8
4,069,648	+		Ga0059261_3954	0.24	+1.5
4,069,648	+		Ga0059261_3954	0.24	-2.0
4,069,649	-		Ga0059261_3954	0.24	-0.9
4,069,649	-		Ga0059261_3954	0.24	+3.1
4,069,649	-		Ga0059261_3954	0.24	+1.4
4,069,705	+		Ga0059261_3954	0.29	-2.2
4,069,705	+		Ga0059261_3954	0.29	+1.4
4,069,705	+		Ga0059261_3954	0.29	+2.8
4,069,705	+		Ga0059261_3954	0.29	+1.4
4,069,705	+		Ga0059261_3954	0.29	+4.1
4,069,705	+		Ga0059261_3954	0.29	-1.7
4,069,706	-		Ga0059261_3954	0.29	+0.3
4,069,706	-		Ga0059261_3954	0.29	-1.4
4,069,706	-		Ga0059261_3954	0.29	+1.3
4,069,706	-		Ga0059261_3954	0.29	+4.2
4,069,747	+		Ga0059261_3954	0.33	+1.8
4,069,747	+				+0.8
4,069,747	+		Ga0059261_3954	0.33	+5.1
4,069,747	+		Ga0059261_3954	0.33	-1.7
4,069,748	-		Ga0059261_3954	0.33	+1.8
4,069,748	-		Ga0059261_3954	0.33	-0.1
4,069,748	-				+2.4
4,069,778	-		Ga0059261_3954	0.36	+1.4
4,069,819	+		Ga0059261_3954	0.40	+2.8
4,069,819	+		Ga0059261_3954	0.40	-0.8
4,069,880	+		Ga0059261_3954	0.45	+0.4
4,069,962	+		Ga0059261_3954	0.53	+0.9
4,069,962	+		Ga0059261_3954	0.53	+1.5
4,069,962	+		Ga0059261_3954	0.53	+1.1
4,069,963	-				+0.4
4,069,963	-		Ga0059261_3954	0.53	+2.2
4,069,963	-		Ga0059261_3954	0.53	+0.9
4,070,068	+		Ga0059261_3954	0.63	-0.0
4,070,068	+		Ga0059261_3954	0.63	+0.6
4,070,068	+		Ga0059261_3954	0.63	+0.3
4,070,069	-		Ga0059261_3954	0.63	+1.5
4,070,069	-		Ga0059261_3954	0.63	-0.9
4,070,069	-		Ga0059261_3954	0.63	+1.2
4,070,069	-		Ga0059261_3954	0.63	+2.3
4,070,074	+		Ga0059261_3954	0.63	+0.8
4,070,074	+		Ga0059261_3954	0.63	-0.6
4,070,075	-				+4.4
4,070,075	-		Ga0059261_3954	0.64	+1.7
4,070,155	+		Ga0059261_3954	0.71	+0.6
4,070,188	+		Ga0059261_3954	0.74	+2.3
4,070,188	+		Ga0059261_3954	0.74	+0.4
4,070,189	-		Ga0059261_3954	0.74	+1.7
4,070,336	+		Ga0059261_3954	0.88	+0.2
4,070,336	+		Ga0059261_3954	0.88	-0.5
4,070,337	-		Ga0059261_3954	0.88	+1.9
4,070,337	-		Ga0059261_3954	0.88	+0.1