Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3928

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,044,627	+		Ga0059261_3927	0.24	+1.6
4,044,627	+		Ga0059261_3927	0.24	-1.2
4,044,627	+		Ga0059261_3927	0.24	+0.8
4,044,627	+		Ga0059261_3927	0.24	+1.1
4,044,627	+		Ga0059261_3927	0.24	-0.2
4,044,627	+		Ga0059261_3927	0.24	-0.8
4,044,628	-		Ga0059261_3927	0.24	-2.1
4,044,628	-		Ga0059261_3927	0.24	+0.6
4,044,628	-		Ga0059261_3927	0.24	-0.9
4,044,628	-		Ga0059261_3927	0.24	-0.6
4,044,628	-		Ga0059261_3927	0.24	+0.4
4,044,628	-		Ga0059261_3927	0.24	-3.2
4,044,628	-		Ga0059261_3927	0.24	+2.8
4,044,628	-		Ga0059261_3927	0.24	+6.0
4,044,631	+		Ga0059261_3927	0.24	+1.2
4,044,631	+		Ga0059261_3927	0.24	-1.4
4,044,631	+		Ga0059261_3927	0.24	+1.3
4,044,631	+		Ga0059261_3927	0.24	-0.1
4,044,631	+		Ga0059261_3927	0.24	-0.2
4,044,631	+		Ga0059261_3927	0.24	-1.7
4,044,631	+		Ga0059261_3927	0.24	-0.7
4,044,631	+		Ga0059261_3927	0.24	-0.2
4,044,631	+		Ga0059261_3927	0.24	+3.3
4,044,631	+		Ga0059261_3927	0.24	+0.9
4,044,631	+		Ga0059261_3927	0.24	+2.8
4,044,631	+		Ga0059261_3927	0.24	-1.4
4,044,631	+		Ga0059261_3927	0.24	+1.4
4,044,631	+		Ga0059261_3927	0.24	-0.5
4,044,631	+		Ga0059261_3927	0.24	+1.3
4,044,632	-		Ga0059261_3927	0.25	+0.1
4,044,632	-		Ga0059261_3927	0.25	-0.5
4,044,632	-		Ga0059261_3927	0.25	-0.6
4,044,632	-		Ga0059261_3927	0.25	+1.4
4,044,632	-		Ga0059261_3927	0.25	-1.2
4,044,632	-		Ga0059261_3927	0.25	+1.0
4,044,632	-		Ga0059261_3927	0.25	+1.1
4,044,632	-		Ga0059261_3927	0.25	-1.4
4,044,633	+		Ga0059261_3927	0.25	+0.4
4,044,633	+		Ga0059261_3927	0.25	-0.4
4,044,633	+		Ga0059261_3927	0.25	+1.2
4,044,633	+		Ga0059261_3927	0.25	+0.0
4,044,633	+		Ga0059261_3927	0.25	+0.2
4,044,633	+		Ga0059261_3927	0.25	-0.7
4,044,633	+		Ga0059261_3927	0.25	+1.8
4,044,633	+		Ga0059261_3927	0.25	+0.4
4,044,633	+		Ga0059261_3927	0.25	+0.8
4,044,633	+		Ga0059261_3927	0.25	+0.4
4,044,633	+		Ga0059261_3927	0.25	+1.8
4,044,633	+		Ga0059261_3927	0.25	+0.8
4,044,633	+		Ga0059261_3927	0.25	+1.1
4,044,633	+		Ga0059261_3927	0.25	+0.1
4,044,633	+		Ga0059261_3927	0.25	-1.6
4,044,633	+		Ga0059261_3927	0.25	-0.2
4,044,633	+		Ga0059261_3927	0.25	+0.3
4,044,634	-		Ga0059261_3927	0.25	-1.2
4,044,634	-		Ga0059261_3927	0.25	+1.3
4,044,634	-		Ga0059261_3927	0.25	-1.1
4,044,634	-		Ga0059261_3927	0.25	-2.1
4,044,634	-		Ga0059261_3927	0.25	-0.9
4,044,634	-		Ga0059261_3927	0.25	-0.8
4,044,634	-		Ga0059261_3927	0.25	-0.4
4,044,634	-		Ga0059261_3927	0.25	-0.3
4,044,634	-		Ga0059261_3927	0.25	+0.2
4,045,096	-		Ga0059261_3927	0.66	+1.0
4,045,096	-		Ga0059261_3927	0.66	+1.1
4,045,104	+		Ga0059261_3927	0.66	+2.7
4,045,105	-		Ga0059261_3927	0.67	+3.6
4,045,105	-		Ga0059261_3927	0.67	+2.6
4,045,381	+				-1.9
4,045,381	+				+0.8
4,045,382	-				-1.0
4,045,511	-				-0.9
4,045,579	-				-0.2
4,045,584	-				+1.0
4,045,657	+		Ga0059261_3928	0.15	+0.0
4,045,658	-		Ga0059261_3928	0.15	-0.1
4,045,682	+		Ga0059261_3928	0.21	-1.6
4,045,683	-		Ga0059261_3928	0.21	-0.9
4,045,683	-		Ga0059261_3928	0.21	-0.6
4,045,683	-		Ga0059261_3928	0.21	+0.8
4,045,695	+		Ga0059261_3928	0.24	+3.4
4,045,696	-		Ga0059261_3928	0.25	-0.8
4,045,787	+		Ga0059261_3928	0.47	+1.0
4,045,788	-		Ga0059261_3928	0.47	-0.3
4,045,865	+		Ga0059261_3928	0.66	-1.6
4,045,969	+				-0.2
4,045,969	+				-0.8
4,045,970	-				+2.2
4,045,970	-				-0.6
4,045,970	-				-0.0
4,046,150	+				+0.6
4,046,151	-				+1.0
4,046,182	+				+0.6
4,046,184	+				+0.4
4,046,184	+				+0.1
4,046,184	+				-0.9
4,046,184	+				+1.0
4,046,184	+				+1.7
4,046,184	+				-0.8
4,046,185	-				-1.4
4,046,185	-				-0.5
4,046,185	-				+1.0
4,046,185	-				+2.2
4,046,185	-				-0.2
4,046,185	-				-1.7
4,046,185	-				-0.7
4,046,185	-				+2.4
4,046,185	-				-0.2
4,046,185	-				-0.1
4,046,185	-				+0.1
4,046,211	+		Ga0059261_3930	0.13	-0.6
4,046,211	+		Ga0059261_3930	0.13	-0.3
4,046,211	+		Ga0059261_3930	0.13	-0.2
4,046,211	+		Ga0059261_3930	0.13	+2.6
4,046,211	+		Ga0059261_3930	0.13	-0.4
4,046,212	-		Ga0059261_3930	0.13	-1.8
4,046,212	-		Ga0059261_3930	0.13	+0.1
4,046,212	-		Ga0059261_3930	0.13	-2.5
4,046,238	+		Ga0059261_3930	0.18	+1.1
4,046,238	+		Ga0059261_3930	0.18	-1.2
4,046,313	+		Ga0059261_3930	0.33	+1.1
4,046,313	+		Ga0059261_3930	0.33	+2.1
4,046,313	+		Ga0059261_3930	0.33	+0.9
4,046,313	+				+0.8
4,046,313	+		Ga0059261_3930	0.33	+0.0
4,046,313	+		Ga0059261_3930	0.33	+1.2
4,046,313	+		Ga0059261_3930	0.33	+0.7
4,046,313	+		Ga0059261_3930	0.33	+0.8
4,046,314	-		Ga0059261_3930	0.33	-0.4
4,046,314	-		Ga0059261_3930	0.33	+1.2
4,046,317	+		Ga0059261_3930	0.34	-0.2
4,046,317	+		Ga0059261_3930	0.34	-0.2
4,046,317	+		Ga0059261_3930	0.34	+0.2
4,046,317	+		Ga0059261_3930	0.34	+2.5
4,046,317	+		Ga0059261_3930	0.34	+2.4
4,046,317	+		Ga0059261_3930	0.34	+0.2
4,046,317	+		Ga0059261_3930	0.34	-0.6
4,046,317	+		Ga0059261_3930	0.34	-0.7
4,046,317	+		Ga0059261_3930	0.34	+1.4
4,046,317	+		Ga0059261_3930	0.34	+1.1
4,046,318	-		Ga0059261_3930	0.34	+1.1
4,046,318	-		Ga0059261_3930	0.34	-0.6
4,046,318	-		Ga0059261_3930	0.34	-1.2
4,046,318	-		Ga0059261_3930	0.34	+0.8
4,046,318	-		Ga0059261_3930	0.34	-0.8
4,046,318	-		Ga0059261_3930	0.34	+0.6
4,046,318	-		Ga0059261_3930	0.34	+2.8
4,046,318	-		Ga0059261_3930	0.34	+3.7
4,046,334	+		Ga0059261_3930	0.37	+0.2
4,046,334	+		Ga0059261_3930	0.37	+1.6
4,046,334	+		Ga0059261_3930	0.37	+1.2
4,046,334	+		Ga0059261_3930	0.37	-1.7
4,046,335	-		Ga0059261_3930	0.38	-1.5
4,046,335	-		Ga0059261_3930	0.38	-0.2
4,046,335	-		Ga0059261_3930	0.38	+2.1
4,046,335	-		Ga0059261_3930	0.38	-0.4
4,046,358	+		Ga0059261_3930	0.42	-0.9
4,046,358	+		Ga0059261_3930	0.42	-2.3
4,046,358	+		Ga0059261_3930	0.42	+3.8
4,046,358	+		Ga0059261_3930	0.42	-1.1
4,046,358	+		Ga0059261_3930	0.42	-0.3
4,046,358	+		Ga0059261_3930	0.42	+0.1
4,046,359	-		Ga0059261_3930	0.42	-1.2
4,046,411	-		Ga0059261_3930	0.53	-1.6
4,046,467	+		Ga0059261_3930	0.64	+2.5
4,046,468	-		Ga0059261_3930	0.64	-0.4
4,046,493	-		Ga0059261_3930	0.69	-0.1
4,046,571	+		Ga0059261_3930	0.85	+2.1
4,046,571	+		Ga0059261_3930	0.85	+1.0
4,046,571	+		Ga0059261_3930	0.85	+0.6
4,046,571	+		Ga0059261_3930	0.85	-0.8
4,046,572	-		Ga0059261_3930	0.85	-2.3
4,046,572	-		Ga0059261_3930	0.85	+0.0
4,046,572	-		Ga0059261_3930	0.85	+1.2
4,046,736	+				-0.4
4,046,736	+				-0.4
4,046,736	+				+0.9
4,046,736	+				+0.8
4,046,737	-				-2.0
4,046,739	+				+2.2
4,046,739	+				+0.4
4,046,739	+				-0.9
4,046,740	-				+2.0
4,046,740	-				-0.2
4,046,740	-				-1.9
4,046,740	-				+0.6
4,046,740	-				-0.1
4,046,740	-				-0.4
4,046,740	-				-0.1
4,046,889	+		Ga0059261_3931	0.26	-1.5
4,046,889	+		Ga0059261_3931	0.26	-0.9
4,046,889	+		Ga0059261_3931	0.26	+0.1
4,046,889	+		Ga0059261_3931	0.26	+1.8
4,046,889	+		Ga0059261_3931	0.26	+2.1
4,046,890	-		Ga0059261_3931	0.26	+0.7
4,046,890	-		Ga0059261_3931	0.26	+0.9
4,046,890	-		Ga0059261_3931	0.26	-0.5
4,046,919	+		Ga0059261_3931	0.29	+1.0
4,046,919	+		Ga0059261_3931	0.29	+1.0
4,046,919	+		Ga0059261_3931	0.29	+0.6
4,046,920	-		Ga0059261_3931	0.29	+2.0
4,046,920	-		Ga0059261_3931	0.29	+1.1
4,046,920	-		Ga0059261_3931	0.29	+1.1