Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3908

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,017,644	+		Ga0059261_3907	0.28	+0.4
4,017,828	-		Ga0059261_3907	0.41	+1.1
4,017,929	+		Ga0059261_3907	0.49	-0.2
4,017,929	+		Ga0059261_3907	0.49	-1.9
4,017,929	+		Ga0059261_3907	0.49	-0.0
4,017,929	+		Ga0059261_3907	0.49	+1.0
4,017,930	-		Ga0059261_3907	0.49	-1.3
4,017,930	-		Ga0059261_3907	0.49	+1.7
4,017,930	-		Ga0059261_3907	0.49	+0.1
4,017,930	-		Ga0059261_3907	0.49	-1.1
4,017,930	-		Ga0059261_3907	0.49	-1.5
4,017,930	-		Ga0059261_3907	0.49	-0.2
4,017,930	-		Ga0059261_3907	0.49	-1.5
4,017,930	-		Ga0059261_3907	0.49	-0.9
4,017,971	+		Ga0059261_3907	0.52	-0.6
4,017,971	+		Ga0059261_3907	0.52	+3.8
4,017,971	+		Ga0059261_3907	0.52	+0.6
4,017,972	-		Ga0059261_3907	0.52	-0.2
4,017,972	-		Ga0059261_3907	0.52	-0.8
4,017,972	-		Ga0059261_3907	0.52	-2.7
4,017,972	-		Ga0059261_3907	0.52	-2.7
4,017,972	-		Ga0059261_3907	0.52	-0.8
4,017,972	-		Ga0059261_3907	0.52	+1.9
4,018,113	+		Ga0059261_3907	0.62	-1.4
4,018,114	-		Ga0059261_3907	0.62	+0.7
4,018,114	-		Ga0059261_3907	0.62	-0.3
4,018,125	-		Ga0059261_3907	0.63	+0.1
4,018,303	-		Ga0059261_3907	0.76	+0.7
4,018,303	-		Ga0059261_3907	0.76	-1.3
4,018,370	+		Ga0059261_3907	0.81	+2.0
4,018,370	+		Ga0059261_3907	0.81	+0.6
4,018,370	+		Ga0059261_3907	0.81	-1.9
4,018,371	-		Ga0059261_3907	0.81	-0.9
4,018,371	-		Ga0059261_3907	0.81	+2.0
4,018,371	-		Ga0059261_3907	0.81	-0.4
4,018,371	-		Ga0059261_3907	0.81	-1.8
4,018,371	-		Ga0059261_3907	0.81	-0.9
4,018,407	+		Ga0059261_3907	0.84	+0.4
4,018,407	+				+0.8
4,018,407	+		Ga0059261_3907	0.84	-1.4
4,018,407	+		Ga0059261_3907	0.84	-0.1
4,018,408	-		Ga0059261_3907	0.84	-1.9
4,018,457	+		Ga0059261_3907	0.87	-3.1
4,018,457	+		Ga0059261_3907	0.87	-1.3
4,018,457	+		Ga0059261_3907	0.87	-2.4
4,018,457	+		Ga0059261_3907	0.87	+3.8
4,018,457	+		Ga0059261_3907	0.87	-2.1
4,018,457	+		Ga0059261_3907	0.87	+2.3
4,018,457	+		Ga0059261_3907	0.87	+0.1
4,018,457	+		Ga0059261_3907	0.87	-1.3
4,018,457	+		Ga0059261_3907	0.87	+0.5
4,018,458	-		Ga0059261_3907	0.88	-2.0
4,018,458	-		Ga0059261_3907	0.88	+0.9
4,018,458	-		Ga0059261_3907	0.88	+0.1
4,018,458	-		Ga0059261_3907	0.88	-1.6
4,018,458	-		Ga0059261_3907	0.88	+1.0
4,018,458	-		Ga0059261_3907	0.88	+0.6
4,018,458	-		Ga0059261_3907	0.88	+0.0
4,018,458	-		Ga0059261_3907	0.88	+3.6
4,018,458	-		Ga0059261_3907	0.88	+3.9
4,018,458	-		Ga0059261_3907	0.88	-1.1
4,018,487	+		Ga0059261_3907	0.90	+0.6
4,018,487	+		Ga0059261_3907	0.90	+0.1
4,018,487	+		Ga0059261_3907	0.90	-3.1
4,018,487	+		Ga0059261_3907	0.90	+0.5
4,018,488	-		Ga0059261_3907	0.90	+0.7
4,018,488	-		Ga0059261_3907	0.90	+1.8
4,018,547	+				+2.3
4,018,547	+				+0.3
4,018,547	+				+1.7
4,018,547	+				-0.8
4,018,548	-				+2.0
4,018,796	+		Ga0059261_3908	0.11	-0.6
4,018,796	+		Ga0059261_3908	0.11	+1.8
4,018,796	+		Ga0059261_3908	0.11	-1.9
4,018,796	+		Ga0059261_3908	0.11	-2.2
4,018,796	+		Ga0059261_3908	0.11	-0.9
4,018,796	+		Ga0059261_3908	0.11	+0.1
4,018,796	+		Ga0059261_3908	0.11	+2.0
4,018,796	+		Ga0059261_3908	0.11	-0.7
4,018,797	-		Ga0059261_3908	0.11	+0.3
4,018,797	-		Ga0059261_3908	0.11	+1.7
4,018,805	-		Ga0059261_3908	0.11	-1.4
4,018,805	-		Ga0059261_3908	0.11	-1.4
4,018,901	-		Ga0059261_3908	0.17	-1.1
4,019,152	+		Ga0059261_3908	0.33	+0.6
4,019,152	+		Ga0059261_3908	0.33	+1.2
4,019,152	+		Ga0059261_3908	0.33	+0.9
4,019,152	+		Ga0059261_3908	0.33	+2.4
4,019,152	+		Ga0059261_3908	0.33	+0.1
4,019,152	+		Ga0059261_3908	0.33	-1.9
4,019,152	+		Ga0059261_3908	0.33	+2.3
4,019,153	-		Ga0059261_3908	0.33	+0.5
4,019,153	-		Ga0059261_3908	0.33	-0.0
4,019,153	-		Ga0059261_3908	0.33	-1.4
4,019,153	-		Ga0059261_3908	0.33	+1.2
4,019,153	-		Ga0059261_3908	0.33	-1.9
4,019,153	-		Ga0059261_3908	0.33	-0.2
4,019,153	-		Ga0059261_3908	0.33	+3.3
4,019,336	+		Ga0059261_3908	0.45	+1.3
4,019,337	-		Ga0059261_3908	0.45	-1.6
4,019,337	-		Ga0059261_3908	0.45	+1.0
4,019,429	-		Ga0059261_3908	0.51	-0.6
4,019,429	-		Ga0059261_3908	0.51	+0.5
4,019,557	+		Ga0059261_3908	0.59	-1.4
4,019,557	+		Ga0059261_3908	0.59	-1.8
4,019,558	-		Ga0059261_3908	0.59	+0.1
4,019,588	+		Ga0059261_3908	0.61	-2.0
4,019,588	+		Ga0059261_3908	0.61	-0.9
4,019,588	+		Ga0059261_3908	0.61	-1.2
4,019,588	+		Ga0059261_3908	0.61	-1.3
4,019,588	+		Ga0059261_3908	0.61	+1.1
4,019,588	+		Ga0059261_3908	0.61	-0.5
4,019,588	+		Ga0059261_3908	0.61	-2.6
4,019,589	-		Ga0059261_3908	0.61	-1.9
4,019,589	-		Ga0059261_3908	0.61	+1.8
4,019,589	-		Ga0059261_3908	0.61	-1.6
4,019,589	-		Ga0059261_3908	0.61	-2.0
4,019,589	-		Ga0059261_3908	0.61	-1.1
4,019,589	-		Ga0059261_3908	0.61	-0.9
4,019,637	+		Ga0059261_3908	0.64	-0.9
4,019,637	+		Ga0059261_3908	0.64	+1.9
4,019,637	+		Ga0059261_3908	0.64	-0.9
4,019,638	-		Ga0059261_3908	0.64	-1.3
4,019,638	-		Ga0059261_3908	0.64	-0.6
4,019,638	-		Ga0059261_3908	0.64	-0.8
4,019,649	+		Ga0059261_3908	0.65	+1.2
4,019,649	+		Ga0059261_3908	0.65	+1.4
4,019,649	+		Ga0059261_3908	0.65	+1.9
4,019,650	-		Ga0059261_3908	0.65	-2.9
4,019,650	-		Ga0059261_3908	0.65	-1.2
4,019,650	-		Ga0059261_3908	0.65	-0.8
4,019,650	-		Ga0059261_3908	0.65	-2.3
4,019,650	-		Ga0059261_3908	0.65	-0.8
4,019,748	-		Ga0059261_3908	0.71	-1.5
4,020,311	+		Ga0059261_3909	0.26	+1.7
4,020,311	+		Ga0059261_3909	0.26	-1.2
4,020,534	+		Ga0059261_3909	0.80	-2.1
4,020,534	+		Ga0059261_3909	0.80	-2.7
4,020,535	-		Ga0059261_3909	0.80	+1.1
4,020,784	-				-1.5
4,020,786	+				+0.3
4,020,787	-				+0.8
4,020,787	-				+1.6
4,020,787	-				-0.7
4,020,942	+		Ga0059261_3910	0.17	+1.4
4,020,942	+		Ga0059261_3910	0.17	-3.4
4,020,942	+				+0.8
4,020,943	-		Ga0059261_3910	0.17	+1.3
4,020,943	-		Ga0059261_3910	0.17	+0.4
4,020,943	-		Ga0059261_3910	0.17	+3.5
4,020,943	-		Ga0059261_3910	0.17	-0.5
4,021,083	+		Ga0059261_3910	0.24	+0.9
4,021,083	+		Ga0059261_3910	0.24	+3.1
4,021,083	+		Ga0059261_3910	0.24	+1.5
4,021,083	+		Ga0059261_3910	0.24	-1.3
4,021,083	+		Ga0059261_3910	0.24	-2.3
4,021,084	-		Ga0059261_3910	0.24	+0.2
4,021,084	-		Ga0059261_3910	0.24	-2.2
4,021,084	-		Ga0059261_3910	0.24	-3.1
4,021,084	-		Ga0059261_3910	0.24	-0.0
4,021,084	-		Ga0059261_3910	0.24	-0.6
4,021,084	-		Ga0059261_3910	0.24	-2.9
4,021,146	+		Ga0059261_3910	0.27	-1.2
4,021,146	+		Ga0059261_3910	0.27	-1.2
4,021,146	+		Ga0059261_3910	0.27	+3.4
4,021,146	+		Ga0059261_3910	0.27	-0.4
4,021,146	+		Ga0059261_3910	0.27	+0.1
4,021,146	+		Ga0059261_3910	0.27	-0.3
4,021,146	+		Ga0059261_3910	0.27	+2.1
4,021,146	+		Ga0059261_3910	0.27	+0.4
4,021,146	+		Ga0059261_3910	0.27	-2.0
4,021,146	+				+0.1
4,021,146	+		Ga0059261_3910	0.27	-1.4
4,021,146	+		Ga0059261_3910	0.27	-1.1
4,021,147	-		Ga0059261_3910	0.27	+1.1
4,021,147	-		Ga0059261_3910	0.27	-1.1
4,021,147	-		Ga0059261_3910	0.27	-1.2
4,021,147	-		Ga0059261_3910	0.27	+1.4
4,021,147	-		Ga0059261_3910	0.27	+0.3
4,021,147	-		Ga0059261_3910	0.27	-0.2
4,021,147	-		Ga0059261_3910	0.27	-1.9
4,021,147	-		Ga0059261_3910	0.27	+1.5
4,021,147	-		Ga0059261_3910	0.27	-1.2
4,021,147	-		Ga0059261_3910	0.27	+2.8
4,021,147	-		Ga0059261_3910	0.27	-1.3
4,021,147	-		Ga0059261_3910	0.27	-1.5
4,021,147	-		Ga0059261_3910	0.27	-0.3
4,021,147	-		Ga0059261_3910	0.27	+3.2
4,021,147	-		Ga0059261_3910	0.27	+0.4
4,021,147	-		Ga0059261_3910	0.27	-0.8
4,021,147	-		Ga0059261_3910	0.27	-1.7