Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2849

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,957,927	+				-1.2
2,957,982	-		Ga0059261_2848	0.15	-2.7
2,957,982	-		Ga0059261_2848	0.15	-1.0
2,958,077	+		Ga0059261_2848	0.26	+0.2
2,958,077	+		Ga0059261_2848	0.26	+1.7
2,958,077	+		Ga0059261_2848	0.26	+2.6
2,958,078	-		Ga0059261_2848	0.26	-1.4
2,958,084	+		Ga0059261_2848	0.27	+0.5
2,958,084	+		Ga0059261_2848	0.27	+1.1
2,958,084	+		Ga0059261_2848	0.27	-0.0
2,958,085	-		Ga0059261_2848	0.27	-0.1
2,958,085	-		Ga0059261_2848	0.27	-1.3
2,958,085	-		Ga0059261_2848	0.27	+2.2
2,958,095	+		Ga0059261_2848	0.28	-0.1
2,958,095	+		Ga0059261_2848	0.28	-1.8
2,958,095	+		Ga0059261_2848	0.28	-1.3
2,958,095	+		Ga0059261_2848	0.28	-0.3
2,958,096	-		Ga0059261_2848	0.28	-1.3
2,958,096	-		Ga0059261_2848	0.28	-1.7
2,958,096	-		Ga0059261_2848	0.28	-1.3
2,958,096	-		Ga0059261_2848	0.28	-1.5
2,958,096	-		Ga0059261_2848	0.28	+2.1
2,958,226	+		Ga0059261_2848	0.43	-0.8
2,958,226	+		Ga0059261_2848	0.43	+1.2
2,958,437	+		Ga0059261_2848	0.68	-2.1
2,958,437	+		Ga0059261_2848	0.68	+0.3
2,958,437	+		Ga0059261_2848	0.68	+0.3
2,958,437	+		Ga0059261_2848	0.68	+0.4
2,958,437	+		Ga0059261_2848	0.68	-2.8
2,958,438	-		Ga0059261_2848	0.68	-0.7
2,958,438	-		Ga0059261_2848	0.68	+0.7
2,958,438	-		Ga0059261_2848	0.68	+1.0
2,958,438	-		Ga0059261_2848	0.68	-1.0
2,958,438	-		Ga0059261_2848	0.68	-0.3
2,958,438	-		Ga0059261_2848	0.68	-1.1
2,958,475	-		Ga0059261_2848	0.73	-0.6
2,958,512	+		Ga0059261_2848	0.77	+0.6
2,958,513	-		Ga0059261_2848	0.77	+2.1
2,958,555	-		Ga0059261_2848	0.82	+0.8
2,958,555	-		Ga0059261_2848	0.82	-2.2
2,958,576	+		Ga0059261_2848	0.84	-0.3
2,958,577	-		Ga0059261_2848	0.85	-0.4
2,958,577	-		Ga0059261_2848	0.85	-1.4
2,958,577	-		Ga0059261_2848	0.85	-1.7
2,958,597	+		Ga0059261_2848	0.87	-0.6
2,958,701	+				-0.6
2,958,701	+				+0.5
2,958,702	-				+0.5
2,958,702	-				+1.6
2,958,702	-				+0.2
2,958,702	-				-0.3
2,958,713	+				+2.8
2,958,713	+				-3.5
2,958,713	+				+0.5
2,958,713	+				+0.4
2,958,713	+				+1.2
2,958,714	-				-0.9
2,958,714	-				-1.0
2,958,714	-				+0.7
2,958,714	-				+0.2
2,958,714	-				-1.9
2,958,714	-				+0.6
2,958,942	+		Ga0059261_2849	0.14	+1.2
2,958,943	-		Ga0059261_2849	0.14	-0.2
2,958,979	-				+1.5
2,959,093	-		Ga0059261_2849	0.28	+0.2
2,959,121	-		Ga0059261_2849	0.30	-1.5
2,959,164	+		Ga0059261_2849	0.34	-0.5
2,959,165	-		Ga0059261_2849	0.34	-0.6
2,959,165	-		Ga0059261_2849	0.34	+1.5
2,959,251	+		Ga0059261_2849	0.42	-1.4
2,959,252	-		Ga0059261_2849	0.42	-1.5
2,959,252	-				+0.5
2,959,260	+		Ga0059261_2849	0.42	+0.3
2,959,260	+		Ga0059261_2849	0.42	+0.9
2,959,260	+		Ga0059261_2849	0.42	-0.0
2,959,260	+		Ga0059261_2849	0.42	-0.5
2,959,261	-		Ga0059261_2849	0.42	-0.8
2,959,261	-		Ga0059261_2849	0.42	+0.8
2,959,261	-		Ga0059261_2849	0.42	-0.9
2,959,443	+		Ga0059261_2849	0.58	+2.0
2,959,444	-		Ga0059261_2849	0.59	-1.1
2,959,462	+		Ga0059261_2849	0.60	-2.4
2,959,463	-		Ga0059261_2849	0.60	-2.4
2,959,463	-		Ga0059261_2849	0.60	+0.8
2,959,522	+				+1.5
2,959,575	+		Ga0059261_2849	0.70	-1.5
2,959,576	+		Ga0059261_2849	0.70	+1.3
2,959,576	+		Ga0059261_2849	0.70	+3.1
2,959,576	+		Ga0059261_2849	0.70	-0.5
2,959,577	-		Ga0059261_2849	0.70	+1.0
2,959,577	-		Ga0059261_2849	0.70	-0.0
2,959,577	-		Ga0059261_2849	0.70	-0.7
2,959,614	+		Ga0059261_2849	0.74	+2.2
2,959,614	+		Ga0059261_2849	0.74	-0.3
2,959,614	+		Ga0059261_2849	0.74	-1.9
2,959,614	+		Ga0059261_2849	0.74	-2.9
2,959,614	+		Ga0059261_2849	0.74	+3.1
2,959,614	+		Ga0059261_2849	0.74	-0.9
2,959,614	+		Ga0059261_2849	0.74	-2.3
2,959,614	+		Ga0059261_2849	0.74	-0.3
2,959,614	+				+0.2
2,959,615	-		Ga0059261_2849	0.74	+1.0
2,959,615	-		Ga0059261_2849	0.74	-0.1
2,959,615	-		Ga0059261_2849	0.74	-2.0
2,959,615	-		Ga0059261_2849	0.74	-0.5
2,959,615	-		Ga0059261_2849	0.74	+0.2
2,959,615	-		Ga0059261_2849	0.74	-0.6
2,959,615	-		Ga0059261_2849	0.74	+0.4
2,959,615	-		Ga0059261_2849	0.74	-1.7
2,959,653	+		Ga0059261_2849	0.77	-1.4
2,959,653	+		Ga0059261_2849	0.77	-0.0
2,959,653	+		Ga0059261_2849	0.77	-0.0
2,959,653	+		Ga0059261_2849	0.77	-1.0
2,959,653	+		Ga0059261_2849	0.77	-1.4
2,959,653	+		Ga0059261_2849	0.77	+1.5
2,959,654	-		Ga0059261_2849	0.77	-0.9
2,959,654	-		Ga0059261_2849	0.77	-1.0
2,959,654	-		Ga0059261_2849	0.77	-2.0
2,959,654	-		Ga0059261_2849	0.77	+0.8
2,959,654	-		Ga0059261_2849	0.77	+2.2
2,959,935	-				-0.1
2,959,936	+				-2.4
2,959,936	+				-1.3
2,959,936	+				-0.8
2,959,936	+				-0.4
2,959,936	+				+3.0
2,959,936	+				+1.9
2,959,936	+				-0.6
2,959,936	+				+0.2
2,959,936	+				+5.7
2,959,936	+				-1.8
2,959,936	+				-0.3
2,959,936	+				+0.5
2,959,936	+				-0.2
2,959,936	+				-0.1
2,959,936	+				+0.7
2,959,936	+				-1.5
2,959,936	+				+2.3
2,959,936	+				+1.9
2,959,936	+				+1.1
2,959,936	+				-2.1
2,959,936	+				-2.3
2,959,936	+				+0.2
2,959,936	+				-1.2
2,959,936	+				+0.5
2,959,936	+				+0.4
2,959,936	+				-1.8
2,959,936	+				+3.2
2,959,936	+				+0.2
2,959,937	-				+0.6
2,959,937	-				-2.2
2,959,937	-				-1.4
2,959,937	-				+2.8
2,959,937	-				+1.1
2,959,937	-				-0.6
2,959,937	-				-1.6
2,959,937	-				-0.7
2,959,937	-				-1.2
2,959,937	-				-1.5
2,959,937	-				-0.3
2,959,937	-				+0.4
2,959,937	-				+1.4
2,959,937	-				-2.1
2,959,937	-				-3.6
2,959,937	-				+2.5
2,959,937	-				-0.8
2,959,940	+				+0.9
2,959,940	+				-0.1
2,959,940	+				-0.4
2,959,940	+				-1.4
2,959,940	+				+1.0
2,959,940	+				-0.5
2,959,940	+				-2.6
2,959,940	+				-0.1
2,959,940	+				-1.1
2,959,941	-				-0.6
2,959,941	-				+1.5
2,959,941	-				-1.1
2,959,941	-				-1.1
2,959,941	-				-0.6
2,960,039	+		Ga0059261_2850	0.31	-1.1
2,960,039	+		Ga0059261_2850	0.31	-0.6
2,960,039	+		Ga0059261_2850	0.31	-0.9
2,960,039	+		Ga0059261_2850	0.31	+2.5
2,960,039	+		Ga0059261_2850	0.31	-0.8
2,960,040	-		Ga0059261_2850	0.31	+0.6
2,960,040	-		Ga0059261_2850	0.31	+1.2
2,960,040	-		Ga0059261_2850	0.31	-1.4
2,960,040	-		Ga0059261_2850	0.31	-0.2
2,960,040	-		Ga0059261_2850	0.31	+5.3
2,960,040	-		Ga0059261_2850	0.31	+1.2
2,960,040	-		Ga0059261_2850	0.31	+0.4
2,960,155	-		Ga0059261_2850	0.58	+2.9
2,960,155	-		Ga0059261_2850	0.58	+4.8
2,960,222	-		Ga0059261_2850	0.74	+0.5
2,960,222	-		Ga0059261_2850	0.74	-3.2
2,960,327	+				-0.5
2,960,462	+		Ga0059261_2851	0.22	-2.6
2,960,462	+		Ga0059261_2851	0.22	+0.2
2,960,462	+		Ga0059261_2851	0.22	-1.7
2,960,462	+		Ga0059261_2851	0.22	+2.2
2,960,462	+		Ga0059261_2851	0.22	-2.2
2,960,462	+		Ga0059261_2851	0.22	-1.0
2,960,462	+		Ga0059261_2851	0.22	-1.2
2,960,462	+		Ga0059261_2851	0.22	-0.8
2,960,462	+		Ga0059261_2851	0.22	-1.4
2,960,462	+		Ga0059261_2851	0.22	-1.5
2,960,462	+		Ga0059261_2851	0.22	-0.4
2,960,462	+		Ga0059261_2851	0.22	-2.7
2,960,462	+				+1.5
2,960,462	+		Ga0059261_2851	0.22	+1.0
2,960,462	+		Ga0059261_2851	0.22	+0.2
2,960,462	+		Ga0059261_2851	0.22	+2.1
2,960,463	-		Ga0059261_2851	0.22	+1.2
2,960,463	-		Ga0059261_2851	0.22	-1.5
2,960,463	-		Ga0059261_2851	0.22	-0.6
2,960,463	-		Ga0059261_2851	0.22	+0.3
2,960,463	-		Ga0059261_2851	0.22	-0.5
2,960,463	-		Ga0059261_2851	0.22	-2.9
2,960,463	-		Ga0059261_2851	0.22	-2.9
2,960,463	-				+0.9
2,960,463	-		Ga0059261_2851	0.22	+0.5
2,960,463	-		Ga0059261_2851	0.22	+0.4
2,960,463	-		Ga0059261_2851	0.22	-1.6
2,960,463	-		Ga0059261_2851	0.22	-0.5
2,960,463	-		Ga0059261_2851	0.22	-2.1
2,960,465	+		Ga0059261_2851	0.22	+2.3
2,960,465	+		Ga0059261_2851	0.22	-0.6
2,960,466	-		Ga0059261_2851	0.23	-2.7
2,960,466	-		Ga0059261_2851	0.23	+0.5
2,960,466	-		Ga0059261_2851	0.23	-0.2
2,960,466	-		Ga0059261_2851	0.23	-3.4
2,960,505	+		Ga0059261_2851	0.29	-1.6
2,960,508	+		Ga0059261_2851	0.29	+0.7
2,960,811	+		Ga0059261_2851	0.78	-1.6
2,960,812	-		Ga0059261_2851	0.78	+1.5
2,960,867	+		Ga0059261_2851	0.87	+3.2
2,960,868	-		Ga0059261_2851	0.87	+1.8
2,960,902	-				-0.2