Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2777

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,880,619	-				+0.5
2,880,619	-				+0.1
2,880,735	+				-1.3
2,880,736	-				-0.9
2,880,736	-				-1.3
2,880,736	-				+1.3
2,881,076	+		Ga0059261_2776	0.61	+2.1
2,881,076	+		Ga0059261_2776	0.61	+2.2
2,881,077	-		Ga0059261_2776	0.61	+0.6
2,881,077	-		Ga0059261_2776	0.61	-0.1
2,881,111	+		Ga0059261_2776	0.68	-2.5
2,881,111	+		Ga0059261_2776	0.68	-2.1
2,881,111	+		Ga0059261_2776	0.68	+0.6
2,881,111	+		Ga0059261_2776	0.68	+0.1
2,881,111	+		Ga0059261_2776	0.68	+1.6
2,881,112	-		Ga0059261_2776	0.68	+0.6
2,881,112	-		Ga0059261_2776	0.68	+1.0
2,881,112	-		Ga0059261_2776	0.68	-1.0
2,881,112	-		Ga0059261_2776	0.68	+0.6
2,881,112	-		Ga0059261_2776	0.68	+2.5
2,881,112	-		Ga0059261_2776	0.68	-0.1
2,881,112	-		Ga0059261_2776	0.68	-3.0
2,881,112	-		Ga0059261_2776	0.68	-0.7
2,881,116	+		Ga0059261_2776	0.69	+0.4
2,881,116	+		Ga0059261_2776	0.69	-0.8
2,881,116	+		Ga0059261_2776	0.69	+0.4
2,881,116	+		Ga0059261_2776	0.69	+1.0
2,881,116	+		Ga0059261_2776	0.69	-0.5
2,881,116	+		Ga0059261_2776	0.69	-0.7
2,881,116	+		Ga0059261_2776	0.69	-1.4
2,881,117	-		Ga0059261_2776	0.69	+1.5
2,881,117	-		Ga0059261_2776	0.69	+2.5
2,881,117	-		Ga0059261_2776	0.69	+0.7
2,881,147	+		Ga0059261_2776	0.75	+1.3
2,881,147	+		Ga0059261_2776	0.75	+0.2
2,881,147	+		Ga0059261_2776	0.75	-0.3
2,881,147	+		Ga0059261_2776	0.75	-1.6
2,881,148	-		Ga0059261_2776	0.75	-1.9
2,881,148	-		Ga0059261_2776	0.75	-1.0
2,881,148	-		Ga0059261_2776	0.75	+0.6
2,881,148	-		Ga0059261_2776	0.75	-1.1
2,881,236	+				-0.9
2,881,236	+				+0.4
2,881,236	+				-2.2
2,881,237	-				+2.1
2,881,237	-				+0.1
2,881,237	-				-0.7
2,881,275	+				+0.9
2,881,276	-				-0.2
2,881,276	-				-1.6
2,881,276	-				-1.7
2,881,294	+				-0.7
2,881,294	+				+0.2
2,881,294	+				+1.5
2,881,294	+				+3.2
2,881,294	+				-0.5
2,881,295	-				+2.0
2,881,308	+				+0.8
2,881,308	+				+0.9
2,881,308	+				-1.4
2,881,308	+				-1.3
2,881,308	+				-0.1
2,881,308	+				+1.5
2,881,308	+				+0.5
2,881,308	+				+0.1
2,881,308	+				+2.5
2,881,308	+				+1.2
2,881,309	-				-1.8
2,881,309	-				-0.9
2,881,309	-				+2.5
2,881,309	-				-0.3
2,881,364	+				-0.3
2,881,364	+				-0.1
2,881,364	+				-1.6
2,881,364	+				-1.3
2,881,365	-				-1.0
2,881,365	-				-1.7
2,881,365	-				-0.8
2,881,365	-				+0.8
2,881,365	-				-1.1
2,881,365	-				-0.1
2,881,541	+				-2.3
2,881,542	-				-0.6
2,881,542	-				+0.9
2,881,542	-				-1.4
2,881,582	-				-0.5
2,881,582	-				+1.0
2,881,582	-				-0.7
2,881,616	+		Ga0059261_2777	0.11	+0.9
2,881,616	+		Ga0059261_2777	0.11	-0.3
2,881,616	+		Ga0059261_2777	0.11	-0.9
2,881,616	+		Ga0059261_2777	0.11	-2.0
2,881,616	+		Ga0059261_2777	0.11	-0.6
2,881,617	-		Ga0059261_2777	0.11	+1.1
2,881,617	-		Ga0059261_2777	0.11	-2.6
2,881,617	-		Ga0059261_2777	0.11	+0.1
2,881,617	-		Ga0059261_2777	0.11	-1.8
2,881,617	-		Ga0059261_2777	0.11	-0.8
2,881,618	+		Ga0059261_2777	0.12	+0.5
2,881,618	+		Ga0059261_2777	0.12	+0.5
2,881,618	+		Ga0059261_2777	0.12	+0.3
2,881,618	+		Ga0059261_2777	0.12	+2.8
2,881,619	-		Ga0059261_2777	0.12	-1.2
2,881,619	-		Ga0059261_2777	0.12	-0.1
2,881,619	-		Ga0059261_2777	0.12	-2.1
2,881,619	-		Ga0059261_2777	0.12	-2.8
2,881,620	+		Ga0059261_2777	0.12	-1.1
2,881,620	+		Ga0059261_2777	0.12	-0.5
2,881,620	+		Ga0059261_2777	0.12	+2.3
2,881,620	+		Ga0059261_2777	0.12	+5.9
2,881,620	+		Ga0059261_2777	0.12	+1.5
2,881,620	+		Ga0059261_2777	0.12	+1.9
2,881,620	+		Ga0059261_2777	0.12	+0.3
2,881,621	-		Ga0059261_2777	0.13	-1.9
2,881,621	-				+0.5
2,881,621	-		Ga0059261_2777	0.13	-2.3
2,881,621	-		Ga0059261_2777	0.13	-2.4
2,881,621	-				+0.9
2,881,621	-		Ga0059261_2777	0.13	+0.0
2,881,621	-				+0.9
2,881,621	-		Ga0059261_2777	0.13	+1.6
2,881,697	+		Ga0059261_2777	0.39	-0.0
2,881,697	+		Ga0059261_2777	0.39	-2.2
2,881,697	+		Ga0059261_2777	0.39	-1.3
2,881,697	+		Ga0059261_2777	0.39	-0.8
2,881,698	-		Ga0059261_2777	0.40	+0.1
2,881,698	-		Ga0059261_2777	0.40	-0.3
2,881,698	-		Ga0059261_2777	0.40	+1.2
2,881,698	-		Ga0059261_2777	0.40	-0.1
2,881,698	-				+0.9
2,881,698	-		Ga0059261_2777	0.40	-0.3
2,881,698	-		Ga0059261_2777	0.40	+0.5
2,881,706	+		Ga0059261_2777	0.42	-1.1
2,881,706	+		Ga0059261_2777	0.42	-0.5
2,881,706	+		Ga0059261_2777	0.42	+1.3
2,881,706	+		Ga0059261_2777	0.42	+0.3
2,881,706	+		Ga0059261_2777	0.42	+0.9
2,881,706	+		Ga0059261_2777	0.42	+0.2
2,881,706	+		Ga0059261_2777	0.42	-0.4
2,881,706	+		Ga0059261_2777	0.42	+0.8
2,881,706	+		Ga0059261_2777	0.42	+1.5
2,881,706	+		Ga0059261_2777	0.42	+2.0
2,881,706	+		Ga0059261_2777	0.42	-1.6
2,881,707	-		Ga0059261_2777	0.43	-1.6
2,881,707	-		Ga0059261_2777	0.43	-0.2
2,881,707	-		Ga0059261_2777	0.43	+0.6
2,881,707	-		Ga0059261_2777	0.43	-1.6
2,881,707	-		Ga0059261_2777	0.43	+0.5
2,881,707	-		Ga0059261_2777	0.43	-0.2
2,881,707	-		Ga0059261_2777	0.43	+0.1
2,881,707	-		Ga0059261_2777	0.43	-0.5
2,881,707	-		Ga0059261_2777	0.43	-2.3
2,881,707	-		Ga0059261_2777	0.43	+2.2
2,881,713	+		Ga0059261_2777	0.45	+0.9
2,881,714	-		Ga0059261_2777	0.45	-2.4
2,881,714	-		Ga0059261_2777	0.45	-0.8
2,881,714	-		Ga0059261_2777	0.45	+2.4
2,881,714	-		Ga0059261_2777	0.45	+1.2
2,881,826	-		Ga0059261_2777	0.85	-2.8
2,881,826	-		Ga0059261_2777	0.85	+0.5
2,881,826	-		Ga0059261_2777	0.85	+1.5
2,881,826	-		Ga0059261_2777	0.85	-2.8
2,881,826	-		Ga0059261_2777	0.85	+1.2
2,881,826	-		Ga0059261_2777	0.85	+0.4
2,881,826	-		Ga0059261_2777	0.85	+0.6
2,881,826	-		Ga0059261_2777	0.85	+2.5
2,881,826	-		Ga0059261_2777	0.85	+0.1
2,881,826	-		Ga0059261_2777	0.85	+0.5
2,881,826	-		Ga0059261_2777	0.85	+2.0