Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2772

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,876,724	+				-3.1
2,876,724	+				+0.9
2,876,724	+				-0.0
2,876,724	+				-0.1
2,876,725	-				+2.3
2,876,725	-				-0.2
2,876,726	+				+3.0
2,876,726	+				-0.6
2,876,726	+				+0.2
2,876,726	+				-0.9
2,876,726	+				+0.5
2,876,726	+				-1.7
2,876,726	+				+2.9
2,876,727	-				-0.3
2,876,727	-				+0.5
2,876,727	-				-0.9
2,876,727	-				-2.5
2,876,727	-				-0.4
2,876,918	+		Ga0059261_2771	0.28	-1.6
2,876,918	+		Ga0059261_2771	0.28	-1.9
2,876,918	+		Ga0059261_2771	0.28	-0.7
2,876,918	+		Ga0059261_2771	0.28	-0.6
2,876,919	-		Ga0059261_2771	0.28	-0.7
2,876,919	-		Ga0059261_2771	0.28	-0.7
2,877,014	+		Ga0059261_2771	0.41	+2.0
2,877,014	+		Ga0059261_2771	0.41	-1.2
2,877,014	+		Ga0059261_2771	0.41	+0.9
2,877,014	+		Ga0059261_2771	0.41	-0.5
2,877,014	+		Ga0059261_2771	0.41	+0.9
2,877,014	+		Ga0059261_2771	0.41	-0.9
2,877,014	+		Ga0059261_2771	0.41	+1.5
2,877,015	-		Ga0059261_2771	0.41	+0.3
2,877,015	-		Ga0059261_2771	0.41	-1.1
2,877,015	-		Ga0059261_2771	0.41	+0.9
2,877,015	-		Ga0059261_2771	0.41	-1.1
2,877,028	-		Ga0059261_2771	0.42	+0.5
2,877,093	+		Ga0059261_2771	0.51	-0.1
2,877,093	+		Ga0059261_2771	0.51	-2.3
2,877,093	+		Ga0059261_2771	0.51	+3.2
2,877,093	+		Ga0059261_2771	0.51	-1.7
2,877,093	+		Ga0059261_2771	0.51	-0.3
2,877,094	-		Ga0059261_2771	0.51	+2.4
2,877,094	-		Ga0059261_2771	0.51	-0.3
2,877,094	-		Ga0059261_2771	0.51	+0.0
2,877,094	-		Ga0059261_2771	0.51	-0.5
2,877,266	+		Ga0059261_2771	0.73	-1.2
2,877,266	+		Ga0059261_2771	0.73	-1.1
2,877,266	+		Ga0059261_2771	0.73	+0.1
2,877,266	+		Ga0059261_2771	0.73	+0.4
2,877,267	-		Ga0059261_2771	0.73	+0.4
2,877,267	-		Ga0059261_2771	0.73	-0.3
2,877,267	-		Ga0059261_2771	0.73	+0.6
2,877,267	-				+0.5
2,877,267	-		Ga0059261_2771	0.73	+0.5
2,877,267	-		Ga0059261_2771	0.73	-1.5
2,877,267	-		Ga0059261_2771	0.73	-0.7
2,877,302	+		Ga0059261_2771	0.77	+1.4
2,877,302	+		Ga0059261_2771	0.77	-2.5
2,877,302	+		Ga0059261_2771	0.77	+0.8
2,877,303	-		Ga0059261_2771	0.77	+3.5
2,877,303	-		Ga0059261_2771	0.77	-2.1
2,877,485	+				+0.8
2,877,485	+				-1.5
2,877,486	-				-0.7
2,877,486	-				-1.1
2,877,486	-				+5.1
2,877,486	-				-0.9
2,877,491	+				-0.0
2,877,491	+				+1.4
2,877,491	+				-1.7
2,877,491	+				-1.4
2,877,491	+				-1.6
2,877,492	-				-1.5
2,877,492	-				-3.3
2,877,671	+		Ga0059261_2772	0.16	-0.1
2,877,671	+		Ga0059261_2772	0.16	-2.1
2,877,671	+		Ga0059261_2772	0.16	+0.9
2,877,671	+		Ga0059261_2772	0.16	-0.3
2,877,671	+		Ga0059261_2772	0.16	-2.0
2,877,672	-		Ga0059261_2772	0.16	+2.2
2,877,672	-		Ga0059261_2772	0.16	+0.0
2,877,672	-		Ga0059261_2772	0.16	+0.9
2,877,672	-		Ga0059261_2772	0.16	-0.8
2,877,672	-		Ga0059261_2772	0.16	+0.8
2,877,998	+		Ga0059261_2772	0.44	+0.1
2,877,998	+		Ga0059261_2772	0.44	-0.9
2,877,999	-		Ga0059261_2772	0.44	+0.5
2,878,001	+		Ga0059261_2772	0.44	-0.9
2,878,001	+		Ga0059261_2772	0.44	-0.9
2,878,001	+		Ga0059261_2772	0.44	+0.1
2,878,002	-				+2.5
2,878,002	-		Ga0059261_2772	0.44	-2.9
2,878,097	+		Ga0059261_2772	0.52	+0.2
2,878,097	+		Ga0059261_2772	0.52	+3.1
2,878,098	-		Ga0059261_2772	0.52	+0.8
2,878,214	+		Ga0059261_2772	0.62	-2.4
2,878,214	+		Ga0059261_2772	0.62	+1.8
2,878,214	+		Ga0059261_2772	0.62	+0.6
2,878,214	+		Ga0059261_2772	0.62	-0.8
2,878,214	+		Ga0059261_2772	0.62	+1.6
2,878,214	+		Ga0059261_2772	0.62	-1.4
2,878,214	+		Ga0059261_2772	0.62	-1.7
2,878,214	+		Ga0059261_2772	0.62	+0.5
2,878,215	-		Ga0059261_2772	0.62	-0.1
2,878,215	-		Ga0059261_2772	0.62	-0.8
2,878,215	-		Ga0059261_2772	0.62	-1.9
2,878,535	+		Ga0059261_2772	0.90	-2.1
2,878,535	+		Ga0059261_2772	0.90	-0.7
2,878,535	+		Ga0059261_2772	0.90	-1.2
2,878,535	+		Ga0059261_2772	0.90	-0.7
2,878,535	+		Ga0059261_2772	0.90	+0.8
2,878,535	+		Ga0059261_2772	0.90	+1.5
2,878,536	-		Ga0059261_2772	0.90	+0.4
2,878,536	-		Ga0059261_2772	0.90	-0.8
2,878,536	-		Ga0059261_2772	0.90	-1.1
2,878,536	-		Ga0059261_2772	0.90	+1.4
2,878,536	-		Ga0059261_2772	0.90	+0.5
2,878,536	-		Ga0059261_2772	0.90	-0.7
2,878,536	-		Ga0059261_2772	0.90	-0.1
2,878,536	-		Ga0059261_2772	0.90	-0.1
2,878,536	-		Ga0059261_2772	0.90	-0.0
2,878,653	+				+0.8
2,878,653	+				+1.1
2,878,653	+				-0.3
2,878,653	+				-2.6
2,878,653	+				+0.1
2,878,653	+				+0.6
2,878,654	-				+1.4
2,878,654	-				-2.0
2,878,654	-				-2.0
2,878,654	-				-1.2
2,878,654	-				+3.6
2,878,655	+				+0.2
2,878,655	+				-0.2
2,878,655	+				-1.2
2,878,655	+				-1.3
2,878,655	+				+5.0
2,878,655	+				+0.6
2,878,655	+				-1.2
2,878,655	+				-0.3
2,878,655	+				-2.1
2,878,656	-				+0.3
2,878,656	-				-1.1
2,878,656	-				-0.1
2,878,656	-				+3.3
2,878,656	-				+1.4
2,878,656	-				-1.5
2,878,869	+				+0.3
2,878,869	+				-1.2
2,878,870	-				+3.1
2,878,870	-				-1.7
2,878,946	+		Ga0059261_2773	0.18	-1.2
2,878,946	+		Ga0059261_2773	0.18	-1.0
2,878,947	-		Ga0059261_2773	0.18	-0.9
2,878,947	-		Ga0059261_2773	0.18	-0.1
2,879,161	+		Ga0059261_2773	0.42	-0.1
2,879,161	+		Ga0059261_2773	0.42	-0.5
2,879,162	-		Ga0059261_2773	0.42	+0.9
2,879,162	-		Ga0059261_2773	0.42	-1.5
2,879,162	-		Ga0059261_2773	0.42	-0.2
2,879,162	-		Ga0059261_2773	0.42	+0.7
2,879,218	+		Ga0059261_2773	0.48	-2.1
2,879,218	+		Ga0059261_2773	0.48	-0.1
2,879,219	-		Ga0059261_2773	0.48	-2.7
2,879,219	-		Ga0059261_2773	0.48	-2.1
2,879,219	-		Ga0059261_2773	0.48	-1.7
2,879,219	-		Ga0059261_2773	0.48	-0.1
2,879,219	-		Ga0059261_2773	0.48	+0.8
2,879,219	-		Ga0059261_2773	0.48	+1.0
2,879,219	-		Ga0059261_2773	0.48	+0.2
2,879,219	-		Ga0059261_2773	0.48	-1.1
2,879,242	+		Ga0059261_2773	0.50	+1.5
2,879,242	+		Ga0059261_2773	0.50	-0.9
2,879,242	+		Ga0059261_2773	0.50	-2.6
2,879,242	+		Ga0059261_2773	0.50	-1.5
2,879,242	+		Ga0059261_2773	0.50	-2.4
2,879,243	-		Ga0059261_2773	0.51	-1.9
2,879,243	-		Ga0059261_2773	0.51	+0.0
2,879,243	-		Ga0059261_2773	0.51	-2.2
2,879,311	+		Ga0059261_2773	0.58	-1.2
2,879,311	+		Ga0059261_2773	0.58	-0.9
2,879,311	+				+2.2
2,879,311	+		Ga0059261_2773	0.58	-0.8
2,879,311	+		Ga0059261_2773	0.58	-0.8
2,879,311	+		Ga0059261_2773	0.58	+0.6
2,879,312	-		Ga0059261_2773	0.58	-1.5
2,879,312	-		Ga0059261_2773	0.58	+3.5
2,879,312	-		Ga0059261_2773	0.58	-0.3
2,879,312	-		Ga0059261_2773	0.58	-0.6
2,879,312	-		Ga0059261_2773	0.58	-1.6
2,879,312	-		Ga0059261_2773	0.58	+0.2
2,879,312	-		Ga0059261_2773	0.58	-0.5
2,879,312	-		Ga0059261_2773	0.58	+1.5
2,879,312	-		Ga0059261_2773	0.58	+4.2
2,879,449	+		Ga0059261_2773	0.73	+1.1
2,879,449	+		Ga0059261_2773	0.73	-0.1
2,879,449	+		Ga0059261_2773	0.73	-0.3
2,879,449	+		Ga0059261_2773	0.73	+3.9
2,879,450	-		Ga0059261_2773	0.73	+0.5
2,879,450	-		Ga0059261_2773	0.73	-0.6
2,879,450	-				+0.9
2,879,450	-		Ga0059261_2773	0.73	-2.3
2,879,450	-		Ga0059261_2773	0.73	-0.4
2,879,541	+		Ga0059261_2773	0.83	+1.9
2,879,541	+		Ga0059261_2773	0.83	-0.5
2,879,541	+		Ga0059261_2773	0.83	+0.2