Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2771

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,875,906	+				+0.1
2,875,906	+				-0.5
2,875,906	+				-0.7
2,875,906	+				+0.1
2,875,906	+				-1.2
2,875,906	+				-0.1
2,875,907	-				-2.5
2,875,907	-				+1.8
2,875,907	-				+0.1
2,876,136	+				-0.6
2,876,136	+				+4.3
2,876,136	+				-0.1
2,876,137	-				+0.4
2,876,137	-				-1.1
2,876,137	-				+0.9
2,876,137	-				-2.3
2,876,137	-				-2.4
2,876,171	+		Ga0059261_2770	0.15	-2.1
2,876,173	+		Ga0059261_2770	0.15	+2.9
2,876,173	+		Ga0059261_2770	0.15	-0.1
2,876,173	+		Ga0059261_2770	0.15	-0.7
2,876,173	+		Ga0059261_2770	0.15	+2.7
2,876,174	-		Ga0059261_2770	0.15	+0.4
2,876,174	-		Ga0059261_2770	0.15	+0.5
2,876,174	-		Ga0059261_2770	0.15	-1.4
2,876,174	-		Ga0059261_2770	0.15	+0.2
2,876,174	-		Ga0059261_2770	0.15	-1.4
2,876,174	-		Ga0059261_2770	0.15	-1.1
2,876,174	-		Ga0059261_2770	0.15	+0.2
2,876,206	+		Ga0059261_2770	0.21	-0.2
2,876,206	+		Ga0059261_2770	0.21	-0.4
2,876,206	+		Ga0059261_2770	0.21	-0.2
2,876,206	+				+1.5
2,876,206	+		Ga0059261_2770	0.21	-1.9
2,876,207	-		Ga0059261_2770	0.21	+0.1
2,876,207	-		Ga0059261_2770	0.21	-1.9
2,876,207	-		Ga0059261_2770	0.21	+1.1
2,876,207	-		Ga0059261_2770	0.21	-0.3
2,876,207	-		Ga0059261_2770	0.21	-0.9
2,876,207	-		Ga0059261_2770	0.21	+0.5
2,876,207	-		Ga0059261_2770	0.21	-1.4
2,876,207	-		Ga0059261_2770	0.21	-0.3
2,876,278	+		Ga0059261_2770	0.32	-1.3
2,876,278	+		Ga0059261_2770	0.32	-2.1
2,876,278	+		Ga0059261_2770	0.32	-2.1
2,876,279	-		Ga0059261_2770	0.33	-0.7
2,876,364	+		Ga0059261_2770	0.46	-2.6
2,876,365	-		Ga0059261_2770	0.47	+0.1
2,876,423	+		Ga0059261_2770	0.56	+1.4
2,876,423	+		Ga0059261_2770	0.56	-0.9
2,876,423	+		Ga0059261_2770	0.56	+1.7
2,876,423	+		Ga0059261_2770	0.56	-1.0
2,876,423	+		Ga0059261_2770	0.56	-1.9
2,876,423	+		Ga0059261_2770	0.56	-1.1
2,876,423	+		Ga0059261_2770	0.56	-0.0
2,876,423	+		Ga0059261_2770	0.56	-0.1
2,876,423	+		Ga0059261_2770	0.56	-2.7
2,876,424	-		Ga0059261_2770	0.56	-0.9
2,876,424	-				+1.5
2,876,424	-		Ga0059261_2770	0.56	+0.6
2,876,424	-		Ga0059261_2770	0.56	-1.4
2,876,424	-		Ga0059261_2770	0.56	-0.0
2,876,426	-		Ga0059261_2770	0.56	+0.5
2,876,426	-		Ga0059261_2770	0.56	-1.3
2,876,724	+				-3.1
2,876,724	+				+0.9
2,876,724	+				-0.0
2,876,724	+				-0.1
2,876,725	-				+2.3
2,876,725	-				-0.2
2,876,726	+				+3.0
2,876,726	+				-0.6
2,876,726	+				+0.2
2,876,726	+				-0.9
2,876,726	+				+0.5
2,876,726	+				-1.7
2,876,726	+				+2.9
2,876,727	-				-0.3
2,876,727	-				+0.5
2,876,727	-				-0.9
2,876,727	-				-2.5
2,876,727	-				-0.4
2,876,918	+		Ga0059261_2771	0.28	-1.6
2,876,918	+		Ga0059261_2771	0.28	-1.9
2,876,918	+		Ga0059261_2771	0.28	-0.7
2,876,918	+		Ga0059261_2771	0.28	-0.6
2,876,919	-		Ga0059261_2771	0.28	-0.7
2,876,919	-		Ga0059261_2771	0.28	-0.7
2,877,014	+		Ga0059261_2771	0.41	+2.0
2,877,014	+		Ga0059261_2771	0.41	-1.2
2,877,014	+		Ga0059261_2771	0.41	+0.9
2,877,014	+		Ga0059261_2771	0.41	-0.5
2,877,014	+		Ga0059261_2771	0.41	+0.9
2,877,014	+		Ga0059261_2771	0.41	-0.9
2,877,014	+		Ga0059261_2771	0.41	+1.5
2,877,015	-		Ga0059261_2771	0.41	+0.3
2,877,015	-		Ga0059261_2771	0.41	-1.1
2,877,015	-		Ga0059261_2771	0.41	+0.9
2,877,015	-		Ga0059261_2771	0.41	-1.1
2,877,028	-		Ga0059261_2771	0.42	+0.5
2,877,093	+		Ga0059261_2771	0.51	-0.1
2,877,093	+		Ga0059261_2771	0.51	-2.3
2,877,093	+		Ga0059261_2771	0.51	+3.2
2,877,093	+		Ga0059261_2771	0.51	-1.7
2,877,093	+		Ga0059261_2771	0.51	-0.3
2,877,094	-		Ga0059261_2771	0.51	+2.4
2,877,094	-		Ga0059261_2771	0.51	-0.3
2,877,094	-		Ga0059261_2771	0.51	+0.0
2,877,094	-		Ga0059261_2771	0.51	-0.5
2,877,266	+		Ga0059261_2771	0.73	-1.2
2,877,266	+		Ga0059261_2771	0.73	-1.1
2,877,266	+		Ga0059261_2771	0.73	+0.1
2,877,266	+		Ga0059261_2771	0.73	+0.4
2,877,267	-		Ga0059261_2771	0.73	+0.4
2,877,267	-		Ga0059261_2771	0.73	-0.3
2,877,267	-		Ga0059261_2771	0.73	+0.6
2,877,267	-				+0.5
2,877,267	-		Ga0059261_2771	0.73	+0.5
2,877,267	-		Ga0059261_2771	0.73	-1.5
2,877,267	-		Ga0059261_2771	0.73	-0.7
2,877,302	+		Ga0059261_2771	0.77	+1.4
2,877,302	+		Ga0059261_2771	0.77	-2.5
2,877,302	+		Ga0059261_2771	0.77	+0.8
2,877,303	-		Ga0059261_2771	0.77	+3.5
2,877,303	-		Ga0059261_2771	0.77	-2.1
2,877,485	+				+0.8
2,877,485	+				-1.5
2,877,486	-				-0.7
2,877,486	-				-1.1
2,877,486	-				+5.1
2,877,486	-				-0.9
2,877,491	+				-0.0
2,877,491	+				+1.4
2,877,491	+				-1.7
2,877,491	+				-1.4
2,877,491	+				-1.6
2,877,492	-				-1.5
2,877,492	-				-3.3
2,877,671	+		Ga0059261_2772	0.16	-0.1
2,877,671	+		Ga0059261_2772	0.16	-2.1
2,877,671	+		Ga0059261_2772	0.16	+0.9
2,877,671	+		Ga0059261_2772	0.16	-0.3
2,877,671	+		Ga0059261_2772	0.16	-2.0
2,877,672	-		Ga0059261_2772	0.16	+2.2
2,877,672	-		Ga0059261_2772	0.16	+0.0
2,877,672	-		Ga0059261_2772	0.16	+0.9
2,877,672	-		Ga0059261_2772	0.16	-0.8
2,877,672	-		Ga0059261_2772	0.16	+0.8
2,877,998	+		Ga0059261_2772	0.44	+0.1
2,877,998	+		Ga0059261_2772	0.44	-0.9
2,877,999	-		Ga0059261_2772	0.44	+0.5
2,878,001	+		Ga0059261_2772	0.44	-0.9
2,878,001	+		Ga0059261_2772	0.44	-0.9
2,878,001	+		Ga0059261_2772	0.44	+0.1
2,878,002	-				+2.5
2,878,002	-		Ga0059261_2772	0.44	-2.9
2,878,097	+		Ga0059261_2772	0.52	+0.2
2,878,097	+		Ga0059261_2772	0.52	+3.1
2,878,098	-		Ga0059261_2772	0.52	+0.8
2,878,214	+		Ga0059261_2772	0.62	-2.4
2,878,214	+		Ga0059261_2772	0.62	+1.8
2,878,214	+		Ga0059261_2772	0.62	+0.6
2,878,214	+		Ga0059261_2772	0.62	-0.8
2,878,214	+		Ga0059261_2772	0.62	+1.6
2,878,214	+		Ga0059261_2772	0.62	-1.4
2,878,214	+		Ga0059261_2772	0.62	-1.7
2,878,214	+		Ga0059261_2772	0.62	+0.5
2,878,215	-		Ga0059261_2772	0.62	-0.1
2,878,215	-		Ga0059261_2772	0.62	-0.8
2,878,215	-		Ga0059261_2772	0.62	-1.9