Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2745

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,854,047	+				+0.2
2,854,047	+				+1.9
2,854,047	+				+0.1
2,854,048	-				-1.2
2,854,048	-				-0.4
2,854,048	-				+1.7
2,854,048	-				+1.3
2,854,235	+		Ga0059261_2744	0.20	-0.4
2,854,235	+		Ga0059261_2744	0.20	+3.6
2,854,235	+		Ga0059261_2744	0.20	-0.9
2,854,236	-		Ga0059261_2744	0.20	+0.0
2,854,403	+		Ga0059261_2744	0.40	+0.2
2,854,403	+		Ga0059261_2744	0.40	+0.4
2,854,403	+		Ga0059261_2744	0.40	+2.7
2,854,403	+		Ga0059261_2744	0.40	+2.8
2,854,403	+		Ga0059261_2744	0.40	-0.0
2,854,403	+		Ga0059261_2744	0.40	-0.2
2,854,403	+		Ga0059261_2744	0.40	+1.1
2,854,403	+		Ga0059261_2744	0.40	-0.5
2,854,403	+		Ga0059261_2744	0.40	-1.1
2,854,403	+		Ga0059261_2744	0.40	-0.3
2,854,403	+		Ga0059261_2744	0.40	-2.9
2,854,403	+		Ga0059261_2744	0.40	+0.5
2,854,403	+		Ga0059261_2744	0.40	-1.2
2,854,403	+		Ga0059261_2744	0.40	-1.5
2,854,403	+		Ga0059261_2744	0.40	-0.4
2,854,403	+		Ga0059261_2744	0.40	-0.0
2,854,403	+		Ga0059261_2744	0.40	+1.5
2,854,404	-		Ga0059261_2744	0.40	-1.2
2,854,404	-		Ga0059261_2744	0.40	+0.5
2,854,404	-		Ga0059261_2744	0.40	-2.2
2,854,404	-		Ga0059261_2744	0.40	+0.2
2,854,404	-		Ga0059261_2744	0.40	-0.3
2,854,404	-		Ga0059261_2744	0.40	-0.7
2,854,404	-		Ga0059261_2744	0.40	-1.2
2,854,404	-		Ga0059261_2744	0.40	+2.7
2,854,404	-		Ga0059261_2744	0.40	+0.5
2,854,404	-		Ga0059261_2744	0.40	+2.5
2,854,404	-		Ga0059261_2744	0.40	+1.6
2,854,404	-		Ga0059261_2744	0.40	-2.7
2,854,493	+		Ga0059261_2744	0.51	-1.5
2,854,493	+		Ga0059261_2744	0.51	+0.4
2,854,633	+		Ga0059261_2744	0.67	+0.4
2,854,633	+		Ga0059261_2744	0.67	+0.1
2,854,633	+		Ga0059261_2744	0.67	-2.0
2,854,634	-		Ga0059261_2744	0.67	-3.1
2,854,634	-		Ga0059261_2744	0.67	-0.8
2,854,634	-		Ga0059261_2744	0.67	-0.7
2,854,676	+		Ga0059261_2744	0.72	-0.2
2,854,729	+		Ga0059261_2744	0.78	+0.5
2,854,729	+		Ga0059261_2744	0.78	+1.3
2,854,729	+		Ga0059261_2744	0.78	-1.9
2,854,729	+		Ga0059261_2744	0.78	+2.5
2,854,729	+		Ga0059261_2744	0.78	+0.6
2,854,730	-		Ga0059261_2744	0.78	+0.7
2,854,730	-		Ga0059261_2744	0.78	+0.9
2,854,730	-		Ga0059261_2744	0.78	-1.3
2,854,904	+				-2.9
2,854,918	+				+1.0
2,854,918	+				+0.6
2,854,918	+				-0.5
2,854,918	+				+1.3
2,854,919	-				+0.5
2,854,919	-				+1.4
2,854,994	+				+0.2
2,854,995	-				-0.6
2,855,227	+		Ga0059261_2745	0.28	-0.4
2,855,227	+		Ga0059261_2745	0.28	-0.0
2,855,227	+		Ga0059261_2745	0.28	+1.9
2,855,227	+		Ga0059261_2745	0.28	-1.4
2,855,227	+		Ga0059261_2745	0.28	+4.4
2,855,227	+		Ga0059261_2745	0.28	-2.4
2,855,227	+		Ga0059261_2745	0.28	+4.2
2,855,227	+		Ga0059261_2745	0.28	+0.7
2,855,228	-		Ga0059261_2745	0.28	+2.7
2,855,228	-		Ga0059261_2745	0.28	-0.9
2,855,228	-		Ga0059261_2745	0.28	+1.0
2,855,228	-		Ga0059261_2745	0.28	-0.5
2,855,228	-		Ga0059261_2745	0.28	+1.7
2,855,228	-		Ga0059261_2745	0.28	-1.3
2,855,228	-		Ga0059261_2745	0.28	-2.4
2,855,228	-		Ga0059261_2745	0.28	-1.5
2,855,237	+		Ga0059261_2745	0.29	-2.5
2,855,237	+		Ga0059261_2745	0.29	+1.4
2,855,237	+		Ga0059261_2745	0.29	+1.1
2,855,238	-		Ga0059261_2745	0.29	+0.5
2,855,238	-		Ga0059261_2745	0.29	-0.5
2,855,238	-		Ga0059261_2745	0.29	+1.5
2,855,238	-		Ga0059261_2745	0.29	-0.0
2,855,339	+		Ga0059261_2745	0.38	-0.3
2,855,339	+		Ga0059261_2745	0.38	-0.2
2,855,339	+		Ga0059261_2745	0.38	-0.5
2,855,339	+		Ga0059261_2745	0.38	-1.2
2,855,339	+		Ga0059261_2745	0.38	+1.2
2,855,340	-		Ga0059261_2745	0.38	+0.3
2,855,340	-		Ga0059261_2745	0.38	+1.0
2,855,340	-		Ga0059261_2745	0.38	+0.5
2,855,340	-		Ga0059261_2745	0.38	+1.0
2,855,340	-		Ga0059261_2745	0.38	-1.1
2,855,340	-		Ga0059261_2745	0.38	+1.0
2,855,376	-		Ga0059261_2745	0.42	-0.6
2,855,376	-		Ga0059261_2745	0.42	+2.0
2,855,582	+		Ga0059261_2745	0.60	+1.7
2,855,582	+		Ga0059261_2745	0.60	-0.6
2,855,582	+		Ga0059261_2745	0.60	+2.1
2,855,582	+		Ga0059261_2745	0.60	+1.7
2,855,582	+		Ga0059261_2745	0.60	+1.7
2,855,582	+		Ga0059261_2745	0.60	-0.4
2,855,582	+		Ga0059261_2745	0.60	+0.2
2,855,582	+		Ga0059261_2745	0.60	-1.1
2,855,582	+		Ga0059261_2745	0.60	-1.0
2,855,582	+		Ga0059261_2745	0.60	-0.3
2,855,582	+		Ga0059261_2745	0.60	+2.1
2,855,582	+		Ga0059261_2745	0.60	-0.6
2,855,582	+		Ga0059261_2745	0.60	-2.2
2,855,583	-		Ga0059261_2745	0.61	-0.2
2,855,583	-		Ga0059261_2745	0.61	+2.7
2,855,583	-		Ga0059261_2745	0.61	-1.4
2,855,583	-		Ga0059261_2745	0.61	+1.8
2,855,583	-		Ga0059261_2745	0.61	-1.4
2,855,583	-		Ga0059261_2745	0.61	-0.5
2,855,716	+		Ga0059261_2745	0.73	-0.6
2,855,716	+		Ga0059261_2745	0.73	+0.9
2,855,732	+		Ga0059261_2745	0.74	+0.8
2,855,732	+		Ga0059261_2745	0.74	+1.2
2,855,732	+		Ga0059261_2745	0.74	+2.4
2,855,732	+		Ga0059261_2745	0.74	-1.6
2,855,732	+		Ga0059261_2745	0.74	+3.9
2,855,732	+		Ga0059261_2745	0.74	+3.7
2,855,733	-		Ga0059261_2745	0.74	-2.7
2,855,733	-		Ga0059261_2745	0.74	-1.6
2,855,733	-		Ga0059261_2745	0.74	-1.5
2,855,733	-		Ga0059261_2745	0.74	+0.5
2,855,733	-		Ga0059261_2745	0.74	-0.3
2,855,757	-		Ga0059261_2745	0.76	+1.0
2,855,933	+				-0.5
2,856,060	+				-0.5
2,856,060	+				-0.5
2,856,060	+				-3.2
2,856,061	-				-0.3
2,856,061	-				-1.5
2,856,061	-				+4.1
2,856,061	-				-2.2
2,856,302	+		Ga0059261_2746	0.27	+0.2
2,856,302	+				-0.0
2,856,303	-		Ga0059261_2746	0.27	+0.4
2,856,303	-		Ga0059261_2746	0.27	-3.0
2,856,303	-		Ga0059261_2746	0.27	-2.7
2,856,357	-		Ga0059261_2746	0.35	+1.0
2,856,357	-		Ga0059261_2746	0.35	+1.3
2,856,461	+		Ga0059261_2746	0.50	-1.7
2,856,461	+		Ga0059261_2746	0.50	-2.3
2,856,462	-		Ga0059261_2746	0.50	-1.4
2,856,620	+		Ga0059261_2746	0.72	+0.7
2,856,620	+		Ga0059261_2746	0.72	-1.4
2,856,812	+				-0.5
2,856,812	+				-0.3
2,856,812	+				-1.5
2,856,812	+				+1.1
2,856,812	+				-1.3
2,856,813	-				-0.8
2,856,813	-				+0.8
2,856,813	-				+0.6
2,856,813	-				+1.6
2,856,813	-				+0.5
2,856,813	-				+0.3
2,856,816	+				+1.7
2,856,816	+				-0.6
2,856,816	+				+2.7
2,856,817	-				+4.7
2,856,817	-				+1.7
2,856,817	-				+2.2
2,856,817	-				+1.7
2,856,817	-				-0.9
2,856,817	-				-1.1
2,856,924	+		Ga0059261_2747	0.28	-2.4
2,856,925	-		Ga0059261_2747	0.28	+0.6
2,856,925	-		Ga0059261_2747	0.28	-0.0
2,856,925	-		Ga0059261_2747	0.28	+0.8