Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1871

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,981,079	+		Ga0059261_1869	0.88	-2.2
1,981,079	+		Ga0059261_1869	0.88	-1.9
1,981,080	-		Ga0059261_1869	0.88	+0.7
1,981,080	-		Ga0059261_1869	0.88	-1.1
1,981,153	+				+0.6
1,981,154	-				-1.3
1,981,154	-				+0.3
1,981,196	+				-2.8
1,981,196	+				-0.1
1,981,196	+				-1.6
1,981,196	+				-0.2
1,981,196	+				-0.8
1,981,196	+				-1.2
1,981,197	-				+0.7
1,981,197	-				-0.2
1,981,197	-				+1.6
1,981,197	-				+2.3
1,981,197	-				+0.9
1,981,197	-				+1.6
1,981,197	-				-2.2
1,981,197	-				-0.7
1,981,197	-				+0.6
1,981,271	-				-0.7
1,981,271	-				-2.5
1,981,271	-				-1.3
1,981,372	+				+1.0
1,981,372	+		Ga0059261_1870	0.21	-0.7
1,981,372	+		Ga0059261_1870	0.21	-1.1
1,981,372	+				-0.2
1,981,372	+		Ga0059261_1870	0.21	-1.9
1,981,372	+		Ga0059261_1870	0.21	+0.9
1,981,372	+		Ga0059261_1870	0.21	+0.0
1,981,373	-		Ga0059261_1870	0.21	+3.3
1,981,373	-		Ga0059261_1870	0.21	+0.4
1,981,373	-		Ga0059261_1870	0.21	+0.2
1,981,373	-		Ga0059261_1870	0.21	-1.1
1,981,373	-		Ga0059261_1870	0.21	-1.2
1,981,373	-		Ga0059261_1870	0.21	+0.6
1,981,576	+		Ga0059261_1870	0.45	-0.6
1,981,577	-		Ga0059261_1870	0.45	-1.9
1,981,577	-		Ga0059261_1870	0.45	-1.2
1,981,621	+		Ga0059261_1870	0.51	-1.6
1,981,621	+		Ga0059261_1870	0.51	-1.2
1,981,621	+		Ga0059261_1870	0.51	-0.9
1,981,621	+		Ga0059261_1870	0.51	+0.6
1,981,621	+				+2.6
1,981,622	-		Ga0059261_1870	0.51	-2.2
1,981,776	-		Ga0059261_1870	0.70	-0.4
1,982,160	+		Ga0059261_1871	0.12	-1.2
1,982,160	+		Ga0059261_1871	0.12	-0.9
1,982,160	+		Ga0059261_1871	0.12	-1.8
1,982,161	-		Ga0059261_1871	0.12	-2.3
1,982,161	-		Ga0059261_1871	0.12	+0.6
1,982,161	-		Ga0059261_1871	0.12	+0.3
1,982,161	-		Ga0059261_1871	0.12	-0.6
1,982,217	+		Ga0059261_1871	0.17	+0.2
1,982,217	+		Ga0059261_1871	0.17	-0.4
1,982,217	+		Ga0059261_1871	0.17	-1.2
1,982,217	+		Ga0059261_1871	0.17	+0.0
1,982,217	+		Ga0059261_1871	0.17	+1.4
1,982,217	+		Ga0059261_1871	0.17	-1.0
1,982,217	+		Ga0059261_1871	0.17	+0.3
1,982,218	-		Ga0059261_1871	0.18	-1.7
1,982,218	-		Ga0059261_1871	0.18	+0.6
1,982,218	-				+0.3
1,982,218	-		Ga0059261_1871	0.18	+0.4
1,982,218	-		Ga0059261_1871	0.18	-1.1
1,982,275	+		Ga0059261_1871	0.23	-3.2
1,982,331	+		Ga0059261_1871	0.28	-1.1
1,982,331	+		Ga0059261_1871	0.28	-0.9
1,982,331	+		Ga0059261_1871	0.28	-0.1
1,982,331	+		Ga0059261_1871	0.28	-0.6
1,982,331	+		Ga0059261_1871	0.28	-2.5
1,982,331	+		Ga0059261_1871	0.28	-1.0
1,982,331	+		Ga0059261_1871	0.28	-0.2
1,982,332	-		Ga0059261_1871	0.28	-1.5
1,982,332	-		Ga0059261_1871	0.28	-3.1
1,982,332	-				+1.0
1,982,332	-		Ga0059261_1871	0.28	-0.2
1,982,556	+		Ga0059261_1871	0.48	-1.6
1,982,556	+		Ga0059261_1871	0.48	-0.7
1,982,556	+				+1.0
1,982,556	+		Ga0059261_1871	0.48	+0.0
1,982,557	-		Ga0059261_1871	0.48	-0.7
1,982,557	-		Ga0059261_1871	0.48	-1.1
1,982,557	-		Ga0059261_1871	0.48	+0.4
1,982,557	-		Ga0059261_1871	0.48	-1.6
1,982,557	-		Ga0059261_1871	0.48	-1.0
1,982,766	+		Ga0059261_1871	0.67	-0.4
1,982,766	+				+2.6
1,982,766	+		Ga0059261_1871	0.67	+0.0
1,982,767	-		Ga0059261_1871	0.67	-0.4
1,982,767	-		Ga0059261_1871	0.67	-1.1
1,982,767	-		Ga0059261_1871	0.67	-1.0
1,982,767	-		Ga0059261_1871	0.67	+0.8
1,982,992	+		Ga0059261_1871	0.87	+1.0
1,982,992	+		Ga0059261_1871	0.87	-0.1
1,982,993	-		Ga0059261_1871	0.88	-1.5
1,982,993	-		Ga0059261_1871	0.88	-0.4
1,983,148	-				+1.8
1,983,148	-				-1.4
1,983,148	-				+2.2
1,983,178	+				+2.2
1,983,178	+				+0.0
1,983,178	+				-1.6
1,983,178	+				-1.5
1,983,178	+				-2.1
1,983,179	-				+0.0
1,983,246	+				-0.8
1,983,369	+		Ga0059261_1872	0.21	-0.2
1,983,369	+		Ga0059261_1872	0.21	-0.4
1,983,582	+		Ga0059261_1872	0.52	-1.6
1,983,582	+		Ga0059261_1872	0.52	+0.1
1,983,583	-		Ga0059261_1872	0.53	-0.4
1,983,583	-		Ga0059261_1872	0.53	+0.6
1,983,585	+		Ga0059261_1872	0.53	+3.6
1,983,586	-		Ga0059261_1872	0.53	-0.7
1,983,586	-		Ga0059261_1872	0.53	-0.4
1,983,586	-		Ga0059261_1872	0.53	-1.1
1,983,693	+		Ga0059261_1872	0.69	-1.4
1,983,693	+		Ga0059261_1872	0.69	-0.2
1,983,774	+		Ga0059261_1872	0.81	+0.8
1,983,774	+		Ga0059261_1872	0.81	-0.5
1,983,774	+		Ga0059261_1872	0.81	-2.1
1,983,774	+		Ga0059261_1872	0.81	+2.3
1,983,774	+		Ga0059261_1872	0.81	-0.7
1,983,900	+				-1.6
1,983,900	+				+1.4
1,983,901	-				+1.7
1,983,901	-				+3.2
1,983,954	+				+0.6
1,983,954	+				+0.5
1,983,954	+				-0.2
1,983,954	+				+0.6
1,983,954	+				-2.5
1,983,954	+				-1.2
1,983,954	+				+1.8
1,983,955	-				-0.9
1,983,955	-				-0.0
1,983,955	-				-0.1
1,983,955	-				-0.7
1,983,955	-				-1.2
1,983,955	-				+0.0
1,983,955	-				-0.8
1,984,103	+		Ga0059261_1873	0.54	-1.0
1,984,103	+		Ga0059261_1873	0.54	-0.3
1,984,103	+				+1.0
1,984,103	+		Ga0059261_1873	0.54	-2.0
1,984,103	+		Ga0059261_1873	0.54	-0.5
1,984,103	+		Ga0059261_1873	0.54	+1.1
1,984,103	+		Ga0059261_1873	0.54	-0.3
1,984,103	+		Ga0059261_1873	0.54	-1.0
1,984,103	+		Ga0059261_1873	0.54	-0.4
1,984,103	+		Ga0059261_1873	0.54	+0.0
1,984,103	+		Ga0059261_1873	0.54	+0.6
1,984,103	+		Ga0059261_1873	0.54	-0.4
1,984,103	+		Ga0059261_1873	0.54	-0.3
1,984,104	-		Ga0059261_1873	0.54	+0.7
1,984,104	-		Ga0059261_1873	0.54	-2.4
1,984,104	-		Ga0059261_1873	0.54	+0.3
1,984,104	-		Ga0059261_1873	0.54	+1.2
1,984,104	-		Ga0059261_1873	0.54	-1.1
1,984,104	-		Ga0059261_1873	0.54	+2.7
1,984,104	-		Ga0059261_1873	0.54	-0.1
1,984,104	-		Ga0059261_1873	0.54	+1.6
1,984,104	-		Ga0059261_1873	0.54	+1.3
1,984,104	-		Ga0059261_1873	0.54	+3.3
1,984,104	-		Ga0059261_1873	0.54	-0.9
1,984,104	-		Ga0059261_1873	0.54	-1.1
1,984,104	-		Ga0059261_1873	0.54	-1.6
1,984,104	-		Ga0059261_1873	0.54	-0.4