Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1565

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,634,656	-		Ga0059261_1563	0.29	-3.0
1,634,846	+		Ga0059261_1563	0.79	+1.2
1,634,846	+		Ga0059261_1563	0.79	-0.6
1,634,847	-		Ga0059261_1563	0.79	+2.6
1,634,944	+				-0.7
1,634,945	-				+1.6
1,634,945	-				-0.2
1,634,945	-				-2.2
1,635,187	+		Ga0059261_1564	0.42	-1.0
1,635,187	+		Ga0059261_1564	0.42	+0.6
1,635,188	-		Ga0059261_1564	0.42	-1.0
1,635,292	+		Ga0059261_1564	0.59	-0.6
1,635,293	-		Ga0059261_1564	0.59	+0.0
1,635,293	-		Ga0059261_1564	0.59	-0.2
1,635,293	-		Ga0059261_1564	0.59	+0.8
1,635,293	-		Ga0059261_1564	0.59	+0.3
1,635,293	-		Ga0059261_1564	0.59	-0.4
1,635,293	-		Ga0059261_1564	0.59	+3.5
1,635,379	+				+1.6
1,635,380	-		Ga0059261_1564	0.73	-0.4
1,635,401	-		Ga0059261_1564	0.76	-0.6
1,635,445	+		Ga0059261_1564	0.83	-0.9
1,635,446	-		Ga0059261_1564	0.83	-2.4
1,635,446	-		Ga0059261_1564	0.83	-0.9
1,635,446	-		Ga0059261_1564	0.83	-2.0
1,635,470	+		Ga0059261_1564	0.87	+0.6
1,635,471	-		Ga0059261_1564	0.87	+0.0
1,635,505	+				+1.0
1,635,506	-				-0.8
1,635,638	+				-1.1
1,635,639	-				-1.9
1,635,639	-				-2.2
1,635,639	-				-1.6
1,635,639	-				-1.1
1,635,639	-				-0.5
1,635,639	-				-2.4
1,635,639	-				-1.1
1,635,639	-				-0.4
1,635,654	-				+1.0
1,635,780	+		Ga0059261_1565	0.11	+0.3
1,635,780	+		Ga0059261_1565	0.11	-1.4
1,635,780	+		Ga0059261_1565	0.11	+0.0
1,635,781	-		Ga0059261_1565	0.11	-2.4
1,635,781	-		Ga0059261_1565	0.11	-1.3
1,635,781	-		Ga0059261_1565	0.11	-3.3
1,635,781	-		Ga0059261_1565	0.11	+0.7
1,635,819	+				+0.6
1,635,819	+		Ga0059261_1565	0.13	-2.0
1,635,820	-		Ga0059261_1565	0.13	-0.4
1,635,820	-		Ga0059261_1565	0.13	-1.2
1,635,832	-		Ga0059261_1565	0.14	-1.6
1,635,832	-		Ga0059261_1565	0.14	-0.1
1,635,832	-		Ga0059261_1565	0.14	-2.1
1,635,832	-		Ga0059261_1565	0.14	+0.8
1,635,832	-		Ga0059261_1565	0.14	-1.2
1,635,836	+		Ga0059261_1565	0.14	-0.4
1,635,837	-				+1.6
1,635,882	-		Ga0059261_1565	0.16	-1.9
1,635,882	-		Ga0059261_1565	0.16	-2.0
1,636,075	+		Ga0059261_1565	0.26	-0.4
1,636,116	-		Ga0059261_1565	0.28	+0.3
1,636,116	-		Ga0059261_1565	0.28	-1.1
1,636,116	-		Ga0059261_1565	0.28	+0.0
1,636,116	-		Ga0059261_1565	0.28	-0.4
1,636,217	+		Ga0059261_1565	0.33	+1.0
1,636,217	+		Ga0059261_1565	0.33	+0.0
1,636,217	+		Ga0059261_1565	0.33	+1.6
1,636,217	+		Ga0059261_1565	0.33	+0.0
1,636,218	-		Ga0059261_1565	0.33	+0.0
1,636,218	-		Ga0059261_1565	0.33	-1.2
1,636,418	+		Ga0059261_1565	0.43	-0.9
1,636,418	+		Ga0059261_1565	0.43	-1.3
1,636,479	+		Ga0059261_1565	0.46	-2.0
1,636,480	-		Ga0059261_1565	0.46	+0.6
1,636,480	-		Ga0059261_1565	0.46	-0.4
1,636,548	-		Ga0059261_1565	0.49	-0.6
1,636,548	-				+0.6
1,636,548	-		Ga0059261_1565	0.49	+0.0
1,636,578	-		Ga0059261_1565	0.51	-2.8
1,636,578	-		Ga0059261_1565	0.51	-2.0
1,636,578	-		Ga0059261_1565	0.51	-0.2
1,636,578	-		Ga0059261_1565	0.51	-0.9
1,636,667	+		Ga0059261_1565	0.55	+1.0
1,636,667	+		Ga0059261_1565	0.55	+0.3
1,636,667	+		Ga0059261_1565	0.55	+0.3
1,636,668	-		Ga0059261_1565	0.55	+0.6
1,636,668	-		Ga0059261_1565	0.55	-1.5
1,636,706	+		Ga0059261_1565	0.57	-1.5
1,636,706	+		Ga0059261_1565	0.57	-1.1
1,636,706	+		Ga0059261_1565	0.57	-0.4
1,636,706	+		Ga0059261_1565	0.57	-2.3
1,636,706	+		Ga0059261_1565	0.57	-0.7
1,636,707	-		Ga0059261_1565	0.57	-2.8
1,636,707	-				+2.6
1,636,707	-		Ga0059261_1565	0.57	-1.5
1,636,758	-		Ga0059261_1565	0.60	-0.7
1,636,943	-		Ga0059261_1565	0.69	-0.6
1,636,957	+		Ga0059261_1565	0.70	-0.7
1,636,957	+		Ga0059261_1565	0.70	-1.4
1,636,958	-		Ga0059261_1565	0.70	-1.4
1,636,958	-		Ga0059261_1565	0.70	+0.0
1,636,958	-		Ga0059261_1565	0.70	-2.4
1,636,958	-		Ga0059261_1565	0.70	-0.3
1,636,958	-		Ga0059261_1565	0.70	-1.6
1,636,958	-		Ga0059261_1565	0.70	-1.6
1,636,961	+		Ga0059261_1565	0.70	-0.6
1,636,961	+		Ga0059261_1565	0.70	-1.2
1,636,961	+		Ga0059261_1565	0.70	-2.3
1,636,961	+		Ga0059261_1565	0.70	+2.3
1,636,961	+		Ga0059261_1565	0.70	+1.6
1,636,961	+		Ga0059261_1565	0.70	+0.3
1,636,962	-		Ga0059261_1565	0.70	-1.7
1,636,962	-		Ga0059261_1565	0.70	+1.6
1,636,962	-		Ga0059261_1565	0.70	-0.7
1,636,962	-		Ga0059261_1565	0.70	-1.9
1,636,962	-		Ga0059261_1565	0.70	-2.8
1,636,962	-		Ga0059261_1565	0.70	+0.7
1,636,962	-		Ga0059261_1565	0.70	-1.9
1,636,962	-		Ga0059261_1565	0.70	-2.0
1,636,964	+		Ga0059261_1565	0.70	-1.7
1,636,965	-		Ga0059261_1565	0.70	-2.6
1,636,988	+		Ga0059261_1565	0.71	-1.0
1,636,989	-		Ga0059261_1565	0.71	-1.1
1,637,036	+		Ga0059261_1565	0.74	-0.5
1,637,037	-		Ga0059261_1565	0.74	-0.2
1,637,154	+		Ga0059261_1565	0.80	-2.2
1,637,155	-		Ga0059261_1565	0.80	+0.0
1,637,155	-		Ga0059261_1565	0.80	-1.8
1,637,155	-		Ga0059261_1565	0.80	-1.2
1,637,156	+		Ga0059261_1565	0.80	-1.8
1,637,156	+		Ga0059261_1565	0.80	+2.6
1,637,157	-		Ga0059261_1565	0.80	-1.2
1,637,157	-		Ga0059261_1565	0.80	+0.3
1,637,157	-		Ga0059261_1565	0.80	+0.1
1,637,157	-		Ga0059261_1565	0.80	+0.0
1,637,234	+		Ga0059261_1565	0.84	-1.5
1,637,253	-		Ga0059261_1565	0.85	-1.6
1,637,346	+		Ga0059261_1565	0.89	-0.9
1,637,347	-		Ga0059261_1565	0.89	-1.2
1,637,347	-		Ga0059261_1565	0.89	+0.6
1,637,347	-		Ga0059261_1565	0.89	-0.4
1,637,348	+		Ga0059261_1565	0.89	+2.1
1,637,348	+		Ga0059261_1565	0.89	-0.4
1,637,348	+		Ga0059261_1565	0.89	-0.9
1,637,349	-		Ga0059261_1565	0.89	+0.0
1,637,349	-		Ga0059261_1565	0.89	-0.6
1,637,349	-		Ga0059261_1565	0.89	-2.2
1,637,349	-		Ga0059261_1565	0.89	-1.1
1,637,349	-		Ga0059261_1565	0.89	-0.1
1,637,349	-		Ga0059261_1565	0.89	-1.6
1,637,349	-		Ga0059261_1565	0.89	+1.0
1,637,349	-		Ga0059261_1565	0.89	-1.0
1,637,349	-		Ga0059261_1565	0.89	-0.4
1,637,349	-		Ga0059261_1565	0.89	-1.4
1,637,349	-		Ga0059261_1565	0.89	+0.7
1,637,379	+				-2.5
1,637,403	-				-2.9
1,637,403	-				-1.7
1,637,417	+				-0.7
1,637,417	+				+0.3
1,637,418	-				-2.1
1,637,701	+		Ga0059261_1566	0.11	-1.2
1,637,702	-		Ga0059261_1566	0.11	+1.3
1,637,735	-				+0.3
1,637,762	+		Ga0059261_1566	0.16	-0.7
1,637,764	+		Ga0059261_1566	0.17	-1.4
1,637,764	+		Ga0059261_1566	0.17	-1.1
1,637,764	+		Ga0059261_1566	0.17	-1.4
1,637,764	+		Ga0059261_1566	0.17	-1.5
1,637,765	-		Ga0059261_1566	0.17	-2.3
1,637,765	-				+1.6
1,637,765	-		Ga0059261_1566	0.17	-0.4
1,637,765	-		Ga0059261_1566	0.17	-1.4
1,637,828	+		Ga0059261_1566	0.22	-0.2
1,637,829	-		Ga0059261_1566	0.22	-2.9
1,637,829	-		Ga0059261_1566	0.22	-0.6
1,638,050	-		Ga0059261_1566	0.41	+1.3
1,638,128	-		Ga0059261_1566	0.48	-0.1
1,638,128	-				+1.0
1,638,128	-		Ga0059261_1566	0.48	-1.4
1,638,154	+		Ga0059261_1566	0.50	-0.4
1,638,155	-				+2.0
1,638,155	-		Ga0059261_1566	0.50	-1.8
1,638,155	-		Ga0059261_1566	0.50	-0.2
1,638,185	+		Ga0059261_1566	0.53	+0.3
1,638,186	-		Ga0059261_1566	0.53	-0.6
1,638,254	-		Ga0059261_1566	0.59	-0.2
1,638,472	+		Ga0059261_1566	0.77	-1.9
1,638,473	-		Ga0059261_1566	0.77	+0.0
1,638,473	-		Ga0059261_1566	0.77	+1.9
1,638,473	-		Ga0059261_1566	0.77	+1.0
1,638,473	-		Ga0059261_1566	0.77	-0.6
1,638,473	-		Ga0059261_1566	0.77	-0.4
1,638,473	-		Ga0059261_1566	0.77	-0.4
1,638,476	+		Ga0059261_1566	0.78	-0.9
1,638,476	+		Ga0059261_1566	0.78	-1.6
1,638,477	-		Ga0059261_1566	0.78	-0.9