Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1237

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,298,079	+				+0.5
1,298,079	+				-0.5
1,298,079	+				-1.7
1,298,079	+				-0.4
1,298,079	+				-1.1
1,298,079	+				-0.4
1,298,079	+				-2.1
1,298,079	+				+0.7
1,298,080	-				+0.2
1,298,080	-				+0.5
1,298,080	-				+0.1
1,298,080	-				+0.3
1,298,080	-				+0.2
1,298,080	-				-0.5
1,298,122	+				+1.5
1,298,122	+				-0.8
1,298,122	+				+0.7
1,298,123	-				+0.2
1,298,128	+				-0.7
1,298,129	-				+0.2
1,298,129	-				+0.5
1,298,226	-				+0.5
1,298,226	-				+0.9
1,298,226	-				-0.8
1,298,226	-				+1.8
1,298,234	+		Ga0059261_1236	0.11	-1.3
1,298,234	+		Ga0059261_1236	0.11	+0.9
1,298,234	+		Ga0059261_1236	0.11	+1.3
1,298,234	+		Ga0059261_1236	0.11	-2.1
1,298,235	-		Ga0059261_1236	0.11	-0.4
1,298,235	-		Ga0059261_1236	0.11	+0.2
1,298,235	-		Ga0059261_1236	0.11	-0.9
1,298,235	-		Ga0059261_1236	0.11	-2.0
1,298,240	+		Ga0059261_1236	0.11	+0.2
1,298,240	+		Ga0059261_1236	0.11	-2.1
1,298,241	-		Ga0059261_1236	0.11	+1.8
1,298,255	+		Ga0059261_1236	0.13	-2.3
1,298,255	+		Ga0059261_1236	0.13	+2.0
1,298,255	+		Ga0059261_1236	0.13	-0.3
1,298,255	+		Ga0059261_1236	0.13	+0.9
1,298,255	+		Ga0059261_1236	0.13	+0.5
1,298,255	+		Ga0059261_1236	0.13	-1.0
1,298,256	-		Ga0059261_1236	0.13	-0.2
1,298,310	-		Ga0059261_1236	0.19	-0.5
1,298,310	-		Ga0059261_1236	0.19	-0.7
1,298,420	+		Ga0059261_1236	0.32	-2.8
1,298,420	+		Ga0059261_1236	0.32	+0.8
1,298,420	+		Ga0059261_1236	0.32	-0.1
1,298,421	-		Ga0059261_1236	0.32	-0.3
1,298,421	-		Ga0059261_1236	0.32	-3.1
1,298,465	+		Ga0059261_1236	0.38	-0.5
1,298,465	+		Ga0059261_1236	0.38	-1.1
1,298,466	-		Ga0059261_1236	0.38	-0.4
1,298,466	-		Ga0059261_1236	0.38	+0.6
1,298,466	-		Ga0059261_1236	0.38	-0.0
1,298,466	-		Ga0059261_1236	0.38	+0.9
1,298,466	-		Ga0059261_1236	0.38	+0.9
1,298,481	+				+0.9
1,298,481	+		Ga0059261_1236	0.39	-0.1
1,298,482	-		Ga0059261_1236	0.40	-0.5
1,298,516	+		Ga0059261_1236	0.44	-0.9
1,298,516	+		Ga0059261_1236	0.44	-1.3
1,298,516	+		Ga0059261_1236	0.44	-1.7
1,298,516	+		Ga0059261_1236	0.44	-1.0
1,298,516	+		Ga0059261_1236	0.44	-0.7
1,298,517	-		Ga0059261_1236	0.44	+0.6
1,298,517	-		Ga0059261_1236	0.44	-1.4
1,298,517	-		Ga0059261_1236	0.44	+0.6
1,298,517	-		Ga0059261_1236	0.44	-0.7
1,298,517	-		Ga0059261_1236	0.44	+1.3
1,298,561	-		Ga0059261_1236	0.49	-0.5
1,298,570	+		Ga0059261_1236	0.50	+0.2
1,298,570	+		Ga0059261_1236	0.50	+0.0
1,298,570	+		Ga0059261_1236	0.50	-1.0
1,298,570	+		Ga0059261_1236	0.50	-2.8
1,298,571	-		Ga0059261_1236	0.50	-1.1
1,298,571	-		Ga0059261_1236	0.50	-0.0
1,298,571	-		Ga0059261_1236	0.50	+1.3
1,298,571	-		Ga0059261_1236	0.50	-1.1
1,298,621	+		Ga0059261_1236	0.56	+0.5
1,298,621	+		Ga0059261_1236	0.56	-0.1
1,298,622	-		Ga0059261_1236	0.56	+2.2
1,298,685	+		Ga0059261_1236	0.63	-1.4
1,298,685	+		Ga0059261_1236	0.63	+0.9
1,298,685	+		Ga0059261_1236	0.63	-1.3
1,298,686	-		Ga0059261_1236	0.63	-1.3
1,298,686	-		Ga0059261_1236	0.63	+2.0
1,298,693	+		Ga0059261_1236	0.64	-0.7
1,298,693	+				+2.5
1,298,693	+		Ga0059261_1236	0.64	-1.2
1,298,694	-		Ga0059261_1236	0.64	-0.7
1,298,696	+		Ga0059261_1236	0.65	-0.1
1,298,696	+		Ga0059261_1236	0.65	-1.0
1,298,697	-		Ga0059261_1236	0.65	-0.1
1,298,697	-		Ga0059261_1236	0.65	-2.4
1,298,697	-		Ga0059261_1236	0.65	-0.8
1,298,697	-		Ga0059261_1236	0.65	+0.3
1,298,697	-		Ga0059261_1236	0.65	-0.5
1,298,698	+		Ga0059261_1236	0.65	+0.3
1,298,698	+		Ga0059261_1236	0.65	+0.4
1,298,698	+		Ga0059261_1236	0.65	-1.5
1,298,698	+		Ga0059261_1236	0.65	+0.7
1,298,699	-		Ga0059261_1236	0.65	+1.5
1,298,708	+		Ga0059261_1236	0.66	+0.8
1,298,709	-		Ga0059261_1236	0.66	+0.8
1,298,764	+		Ga0059261_1236	0.73	+0.5
1,298,764	+		Ga0059261_1236	0.73	-2.0
1,298,764	+		Ga0059261_1236	0.73	-2.9
1,298,764	+		Ga0059261_1236	0.73	-1.9
1,298,764	+		Ga0059261_1236	0.73	-1.4
1,298,765	-		Ga0059261_1236	0.73	-0.5
1,298,828	+		Ga0059261_1236	0.80	-0.3
1,298,829	-		Ga0059261_1236	0.80	-2.8
1,298,829	-		Ga0059261_1236	0.80	-1.6
1,298,829	-		Ga0059261_1236	0.80	-0.5
1,298,899	-		Ga0059261_1236	0.88	-1.0
1,298,899	-		Ga0059261_1236	0.88	+1.4
1,298,978	+				+0.9
1,298,978	+				-1.6
1,298,978	+				-1.3
1,298,978	+				+0.5
1,298,979	-				-1.1
1,298,979	-				-0.4
1,298,979	-				+1.7
1,298,979	-				-0.8
1,299,109	-		Ga0059261_1237	0.20	-1.5
1,299,170	+		Ga0059261_1237	0.31	+0.9
1,299,186	+		Ga0059261_1237	0.34	-1.0
1,299,187	-		Ga0059261_1237	0.34	-0.2
1,299,214	+		Ga0059261_1237	0.39	+0.5
1,299,215	-		Ga0059261_1237	0.39	-1.7
1,299,215	-		Ga0059261_1237	0.39	+1.7
1,299,232	+		Ga0059261_1237	0.42	-0.2
1,299,408	+		Ga0059261_1237	0.73	+2.5
1,299,409	-		Ga0059261_1237	0.73	+1.0
1,299,409	-		Ga0059261_1237	0.73	+0.0
1,299,409	-		Ga0059261_1237	0.73	+0.7
1,299,409	-		Ga0059261_1237	0.73	+0.4
1,299,409	-		Ga0059261_1237	0.73	+4.1
1,299,409	-		Ga0059261_1237	0.73	+0.2
1,299,409	-		Ga0059261_1237	0.73	+0.2
1,299,409	-		Ga0059261_1237	0.73	+0.1
1,299,410	+		Ga0059261_1237	0.73	-0.3
1,299,410	+		Ga0059261_1237	0.73	+0.1
1,299,410	+		Ga0059261_1237	0.73	-1.5
1,299,410	+		Ga0059261_1237	0.73	+1.9
1,299,410	+		Ga0059261_1237	0.73	+1.0
1,299,410	+		Ga0059261_1237	0.73	+0.4
1,299,410	+		Ga0059261_1237	0.73	+0.9
1,299,410	+		Ga0059261_1237	0.73	+1.9
1,299,410	+		Ga0059261_1237	0.73	-1.3
1,299,411	-		Ga0059261_1237	0.73	+2.1
1,299,411	-		Ga0059261_1237	0.73	-1.1
1,299,411	-		Ga0059261_1237	0.73	+2.7
1,299,411	-		Ga0059261_1237	0.73	+2.1
1,299,411	-		Ga0059261_1237	0.73	+1.3
1,299,411	-		Ga0059261_1237	0.73	-0.3
1,299,411	-		Ga0059261_1237	0.73	-0.4
1,299,411	-		Ga0059261_1237	0.73	+1.1
1,299,411	-		Ga0059261_1237	0.73	-0.6
1,299,411	-		Ga0059261_1237	0.73	-0.1
1,299,411	-		Ga0059261_1237	0.73	-1.8
1,299,411	-		Ga0059261_1237	0.73	+0.8
1,299,411	-		Ga0059261_1237	0.73	-0.3
1,299,411	-		Ga0059261_1237	0.73	+0.6
1,299,411	-		Ga0059261_1237	0.73	+1.6
1,299,411	-		Ga0059261_1237	0.73	+1.8
1,299,411	-		Ga0059261_1237	0.73	-0.2
1,299,432	+		Ga0059261_1237	0.77	-2.5
1,299,432	+		Ga0059261_1237	0.77	+5.8
1,299,437	+		Ga0059261_1237	0.78	+0.2
1,299,438	-		Ga0059261_1237	0.78	-1.7
1,299,438	-		Ga0059261_1237	0.78	+1.7
1,299,438	-		Ga0059261_1237	0.78	+0.7
1,299,557	+				+1.3
1,299,557	+				+1.3
1,299,558	-				+2.6
1,299,702	+		Ga0059261_1238	0.13	+3.0
1,299,702	+		Ga0059261_1238	0.13	+1.3
1,299,702	+		Ga0059261_1238	0.13	+0.8
1,299,703	-		Ga0059261_1238	0.13	-1.8
1,299,703	-		Ga0059261_1238	0.13	-1.5
1,299,703	-		Ga0059261_1238	0.13	+0.5
1,299,703	-		Ga0059261_1238	0.13	+0.3
1,299,703	-		Ga0059261_1238	0.13	-1.2
1,299,763	+		Ga0059261_1238	0.18	+5.5
1,299,763	+		Ga0059261_1238	0.18	-0.2
1,299,763	+		Ga0059261_1238	0.18	-1.4
1,299,764	-		Ga0059261_1238	0.18	+4.1
1,299,764	-		Ga0059261_1238	0.18	-0.1
1,299,764	-		Ga0059261_1238	0.18	-0.4
1,299,791	+		Ga0059261_1238	0.21	+3.2
1,299,849	+		Ga0059261_1238	0.26	+0.7
1,299,850	-		Ga0059261_1238	0.26	+0.9
1,299,933	+		Ga0059261_1238	0.33	+2.6
1,299,933	+		Ga0059261_1238	0.33	+2.5
1,299,934	-		Ga0059261_1238	0.33	+2.2
1,299,934	-		Ga0059261_1238	0.33	+2.4
1,299,934	-		Ga0059261_1238	0.33	+0.7
1,299,934	-		Ga0059261_1238	0.33	-2.3
1,299,934	-		Ga0059261_1238	0.33	-0.2
1,299,994	+		Ga0059261_1238	0.38	+1.9
1,299,995	-		Ga0059261_1238	0.39	+2.7
1,300,333	+		Ga0059261_1238	0.68	+5.4
1,300,333	+		Ga0059261_1238	0.68	-0.7
1,300,333	+		Ga0059261_1238	0.68	+0.1
1,300,334	-		Ga0059261_1238	0.68	+2.1
1,300,334	-		Ga0059261_1238	0.68	-0.5
1,300,334	-		Ga0059261_1238	0.68	-0.1
1,300,336	+		Ga0059261_1238	0.69	+1.7
1,300,337	-		Ga0059261_1238	0.69	-0.8
1,300,337	-		Ga0059261_1238	0.69	+1.2
1,300,337	-		Ga0059261_1238	0.69	-1.0
1,300,337	-				+1.5
1,300,337	-		Ga0059261_1238	0.69	+0.6
1,300,337	-		Ga0059261_1238	0.69	+0.5
1,300,337	-		Ga0059261_1238	0.69	+3.3
1,300,401	+		Ga0059261_1238	0.74	+0.6
1,300,401	+		Ga0059261_1238	0.74	-0.7
1,300,401	+		Ga0059261_1238	0.74	-0.1
1,300,402	-		Ga0059261_1238	0.74	+0.3
1,300,402	-				+3.1
1,300,402	-		Ga0059261_1238	0.74	-0.8
1,300,402	-				+0.9
1,300,402	-		Ga0059261_1238	0.74	-1.2
1,300,402	-		Ga0059261_1238	0.74	+1.2
1,300,402	-		Ga0059261_1238	0.74	-2.2
1,300,555	+		Ga0059261_1238	0.88	+0.9
1,300,556	-		Ga0059261_1238	0.88	+0.0