Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0634 and Ga0059261_0635 are separated by 38 nucleotides Ga0059261_0635 and Ga0059261_0636 are separated by 425 nucleotides
Ga0059261_0634: Ga0059261_0634 - Delta-aminolevulinic acid dehydratase, at 674,081 to 675,070
_0634
Ga0059261_0635: Ga0059261_0635 - choice-of-anchor A domain, at 675,109 to 676,173
_0635
Ga0059261_0636: Ga0059261_0636 - valyl-tRNA synthetase (EC 6.1.1.9), at 676,599 to 679,388
_0636
Position (kb) 675
676
677 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 675.275 kb on + strand, within Ga0059261_0635 at 675.275 kb on + strand, within Ga0059261_0635 at 675.275 kb on + strand, within Ga0059261_0635 at 675.275 kb on + strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.279 kb on + strand, within Ga0059261_0635 at 675.279 kb on + strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.287 kb on + strand, within Ga0059261_0635 at 675.288 kb on - strand at 675.288 kb on - strand, within Ga0059261_0635 at 675.288 kb on - strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.987 kb on - strand, within Ga0059261_0635 at 675.987 kb on - strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.027 kb on - strand, within Ga0059261_0635 at 676.167 kb on + strand at 676.167 kb on + strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.178 kb on + strand at 676.185 kb on + strand at 676.290 kb on + strand at 676.291 kb on - strand at 676.310 kb on - strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.343 kb on - strand at 676.343 kb on - strand at 676.343 kb on - strand at 676.343 kb on - strand at 676.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 675,275 + Ga0059261_0635 0.16 +2.9 675,275 + Ga0059261_0635 0.16 -0.6 675,275 + Ga0059261_0635 0.16 +0.5 675,275 + Ga0059261_0635 0.16 -2.9 675,276 - Ga0059261_0635 0.16 -2.7 675,276 - Ga0059261_0635 0.16 -1.0 675,276 - Ga0059261_0635 0.16 +0.1 675,276 - Ga0059261_0635 0.16 +0.8 675,276 - Ga0059261_0635 0.16 -1.0 675,276 - Ga0059261_0635 0.16 -2.0 675,276 - Ga0059261_0635 0.16 -1.4 675,279 + Ga0059261_0635 0.16 -1.3 675,279 + Ga0059261_0635 0.16 -0.4 675,280 - Ga0059261_0635 0.16 -0.1 675,280 - Ga0059261_0635 0.16 -1.4 675,280 - Ga0059261_0635 0.16 -0.1 675,280 - Ga0059261_0635 0.16 +0.6 675,280 - Ga0059261_0635 0.16 -2.6 675,287 + Ga0059261_0635 0.17 -0.4 675,288 - +0.8 675,288 - Ga0059261_0635 0.17 +0.6 675,288 - Ga0059261_0635 0.17 +2.5 675,986 + Ga0059261_0635 0.82 +1.4 675,986 + Ga0059261_0635 0.82 -0.1 675,986 + Ga0059261_0635 0.82 +0.8 675,986 + Ga0059261_0635 0.82 -1.4 675,986 + Ga0059261_0635 0.82 +0.5 675,987 - Ga0059261_0635 0.82 +0.6 675,987 - Ga0059261_0635 0.82 +1.5 676,026 + Ga0059261_0635 0.86 -0.2 676,026 + Ga0059261_0635 0.86 +2.6 676,026 + Ga0059261_0635 0.86 -1.1 676,026 + Ga0059261_0635 0.86 +1.5 676,026 + Ga0059261_0635 0.86 -3.9 676,027 - Ga0059261_0635 0.86 +2.2 676,167 + -1.1 676,167 + -0.1 676,168 - +0.2 676,168 - -1.2 676,168 - +1.6 676,168 - -1.2 676,168 - -1.4 676,168 - +1.3 676,168 - +0.4 676,173 + -0.2 676,173 + -0.9 676,173 + +1.0 676,173 + +1.5 676,173 + -0.8 676,173 + -0.2 676,174 - -1.6 676,174 - -2.4 676,174 - -1.8 676,174 - -1.3 676,174 - +0.8 676,178 + -0.6 676,185 + +0.2 676,290 + +0.7 676,291 - +0.4 676,310 - -1.3 676,342 + -0.8 676,342 + -1.1 676,342 + -1.3 676,342 + -1.1 676,342 + -3.0 676,342 + -1.3 676,343 - -0.5 676,343 - +0.3 676,343 - +3.2 676,343 - +1.4 676,343 - -0.8
Or see this region's nucleotide sequence