Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28420 and AO356_28425 are separated by 33 nucleotides AO356_28425 and AO356_28430 are separated by 114 nucleotides AO356_28430 and AO356_28435 are separated by 153 nucleotides AO356_28435 and AO356_28440 are separated by 15 nucleotides
AO356_28420: AO356_28420 - hypothetical protein, at 6,609,171 to 6,609,896
_28420
AO356_28425: AO356_28425 - hypothetical protein, at 6,609,930 to 6,610,556
_28425
AO356_28430: AO356_28430 - hypothetical protein, at 6,610,671 to 6,611,048
_28430
AO356_28435: AO356_28435 - SAM-dependent methyltransferase, at 6,611,202 to 6,611,897
_28435
AO356_28440: AO356_28440 - galactose 1-dehydrogenase, at 6,611,913 to 6,612,839
_28440
Position (kb)
6610
6611
6612 Strain fitness (log2 ratio)
-1
0
1 at 6610.060 kb on + strand, within AO356_28425 at 6610.070 kb on - strand, within AO356_28425 at 6610.070 kb on - strand, within AO356_28425 at 6610.070 kb on - strand, within AO356_28425 at 6610.082 kb on - strand, within AO356_28425 at 6610.183 kb on + strand, within AO356_28425 at 6610.184 kb on - strand, within AO356_28425 at 6610.184 kb on - strand, within AO356_28425 at 6610.184 kb on - strand, within AO356_28425 at 6610.293 kb on + strand, within AO356_28425 at 6610.293 kb on + strand, within AO356_28425 at 6610.293 kb on + strand, within AO356_28425 at 6610.354 kb on + strand, within AO356_28425 at 6610.354 kb on + strand, within AO356_28425 at 6610.423 kb on + strand, within AO356_28425 at 6610.571 kb on + strand at 6610.572 kb on - strand at 6610.801 kb on - strand, within AO356_28430 at 6610.906 kb on - strand, within AO356_28430 at 6610.965 kb on + strand, within AO356_28430 at 6610.989 kb on - strand, within AO356_28430 at 6611.018 kb on + strand at 6611.018 kb on + strand at 6611.019 kb on - strand at 6611.380 kb on + strand, within AO356_28435 at 6611.380 kb on + strand, within AO356_28435 at 6611.398 kb on + strand, within AO356_28435 at 6611.441 kb on - strand, within AO356_28435 at 6611.849 kb on + strand at 6612.034 kb on + strand, within AO356_28440
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 6,610,060 + AO356_28425 0.21 +0.2 6,610,070 - AO356_28425 0.22 -0.9 6,610,070 - AO356_28425 0.22 -0.6 6,610,070 - AO356_28425 0.22 -0.1 6,610,082 - AO356_28425 0.24 -0.3 6,610,183 + AO356_28425 0.40 +0.8 6,610,184 - AO356_28425 0.41 +0.4 6,610,184 - AO356_28425 0.41 +0.1 6,610,184 - AO356_28425 0.41 +0.2 6,610,293 + AO356_28425 0.58 -0.2 6,610,293 + AO356_28425 0.58 -0.5 6,610,293 + AO356_28425 0.58 +0.9 6,610,354 + AO356_28425 0.68 -0.9 6,610,354 + AO356_28425 0.68 +0.1 6,610,423 + AO356_28425 0.79 +1.2 6,610,571 + -0.9 6,610,572 - -0.7 6,610,801 - AO356_28430 0.34 +0.1 6,610,906 - AO356_28430 0.62 -0.5 6,610,965 + AO356_28430 0.78 -0.8 6,610,989 - AO356_28430 0.84 -0.2 6,611,018 + -0.1 6,611,018 + -0.1 6,611,019 - -0.7 6,611,380 + AO356_28435 0.26 -0.3 6,611,380 + AO356_28435 0.26 +1.1 6,611,398 + AO356_28435 0.28 +0.8 6,611,441 - AO356_28435 0.34 +0.9 6,611,849 + -0.1 6,612,034 + AO356_28440 0.13 +1.0
Or see this region's nucleotide sequence