Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25785 and AO356_25790 are separated by 3 nucleotides AO356_25790 and AO356_25795 overlap by 4 nucleotides
AO356_25785: AO356_25785 - hypothetical protein, at 5,830,003 to 5,831,412
_25785
AO356_25790: AO356_25790 - hypothetical protein, at 5,831,416 to 5,832,366
_25790
AO356_25795: AO356_25795 - transglutaminase, at 5,832,363 to 5,833,160
_25795
Position (kb) 5831
5832
5833 Strain fitness (log2 ratio) -1
0
1
2 at 5830.463 kb on - strand, within AO356_25785 at 5830.465 kb on + strand, within AO356_25785 at 5830.466 kb on - strand, within AO356_25785 at 5830.466 kb on - strand, within AO356_25785 at 5830.508 kb on - strand, within AO356_25785 at 5830.508 kb on - strand, within AO356_25785 at 5830.508 kb on - strand, within AO356_25785 at 5830.508 kb on - strand, within AO356_25785 at 5830.681 kb on + strand, within AO356_25785 at 5830.681 kb on + strand, within AO356_25785 at 5830.765 kb on + strand, within AO356_25785 at 5830.765 kb on + strand, within AO356_25785 at 5830.765 kb on + strand, within AO356_25785 at 5830.766 kb on - strand, within AO356_25785 at 5830.766 kb on - strand, within AO356_25785 at 5830.766 kb on - strand, within AO356_25785 at 5830.766 kb on - strand, within AO356_25785 at 5830.766 kb on - strand, within AO356_25785 at 5830.767 kb on + strand, within AO356_25785 at 5830.767 kb on + strand, within AO356_25785 at 5830.767 kb on + strand, within AO356_25785 at 5830.767 kb on + strand, within AO356_25785 at 5830.767 kb on + strand, within AO356_25785 at 5830.828 kb on + strand, within AO356_25785 at 5830.828 kb on + strand, within AO356_25785 at 5830.958 kb on - strand, within AO356_25785 at 5830.963 kb on + strand, within AO356_25785 at 5830.964 kb on - strand, within AO356_25785 at 5830.964 kb on - strand, within AO356_25785 at 5830.987 kb on + strand, within AO356_25785 at 5830.988 kb on - strand, within AO356_25785 at 5830.988 kb on - strand, within AO356_25785 at 5831.410 kb on + strand at 5831.410 kb on + strand at 5831.410 kb on + strand at 5831.444 kb on - strand at 5831.671 kb on - strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.674 kb on + strand, within AO356_25790 at 5831.675 kb on - strand, within AO356_25790 at 5831.675 kb on - strand, within AO356_25790 at 5831.675 kb on - strand, within AO356_25790 at 5831.675 kb on - strand, within AO356_25790 at 5831.675 kb on - strand, within AO356_25790 at 5831.677 kb on - strand, within AO356_25790 at 5831.894 kb on - strand, within AO356_25790 at 5832.349 kb on + strand at 5832.350 kb on - strand at 5832.350 kb on - strand at 5832.393 kb on + strand at 5832.393 kb on + strand at 5832.394 kb on - strand at 5832.394 kb on - strand at 5832.394 kb on - strand at 5832.399 kb on + strand at 5832.399 kb on + strand at 5832.903 kb on + strand, within AO356_25795 at 5833.056 kb on + strand, within AO356_25795 at 5833.056 kb on + strand, within AO356_25795 at 5833.158 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 5,830,463 - AO356_25785 0.33 -0.6 5,830,465 + AO356_25785 0.33 -0.3 5,830,466 - AO356_25785 0.33 +0.4 5,830,466 - AO356_25785 0.33 -0.3 5,830,508 - AO356_25785 0.36 -0.3 5,830,508 - AO356_25785 0.36 -0.7 5,830,508 - AO356_25785 0.36 -0.1 5,830,508 - AO356_25785 0.36 +0.8 5,830,681 + AO356_25785 0.48 +0.1 5,830,681 + AO356_25785 0.48 +0.4 5,830,765 + AO356_25785 0.54 +0.2 5,830,765 + AO356_25785 0.54 +0.5 5,830,765 + AO356_25785 0.54 +0.2 5,830,766 - AO356_25785 0.54 +0.3 5,830,766 - AO356_25785 0.54 +0.4 5,830,766 - AO356_25785 0.54 +0.0 5,830,766 - AO356_25785 0.54 +0.1 5,830,766 - AO356_25785 0.54 +1.1 5,830,767 + AO356_25785 0.54 -0.7 5,830,767 + AO356_25785 0.54 -0.0 5,830,767 + AO356_25785 0.54 +0.9 5,830,767 + AO356_25785 0.54 +0.1 5,830,767 + AO356_25785 0.54 -0.1 5,830,828 + AO356_25785 0.59 -0.1 5,830,828 + AO356_25785 0.59 -0.1 5,830,958 - AO356_25785 0.68 +0.3 5,830,963 + AO356_25785 0.68 +0.7 5,830,964 - AO356_25785 0.68 -0.1 5,830,964 - AO356_25785 0.68 +0.1 5,830,987 + AO356_25785 0.70 -0.7 5,830,988 - AO356_25785 0.70 +0.5 5,830,988 - AO356_25785 0.70 +0.1 5,831,410 + -0.0 5,831,410 + +0.8 5,831,410 + -0.2 5,831,444 - +0.9 5,831,671 - AO356_25790 0.27 -0.5 5,831,674 + AO356_25790 0.27 -0.9 5,831,674 + AO356_25790 0.27 +0.3 5,831,674 + AO356_25790 0.27 -0.6 5,831,674 + AO356_25790 0.27 +0.9 5,831,674 + AO356_25790 0.27 -0.6 5,831,674 + AO356_25790 0.27 +0.0 5,831,674 + AO356_25790 0.27 +0.5 5,831,674 + AO356_25790 0.27 +0.3 5,831,674 + AO356_25790 0.27 -1.0 5,831,675 - AO356_25790 0.27 -0.1 5,831,675 - AO356_25790 0.27 +0.5 5,831,675 - AO356_25790 0.27 +0.5 5,831,675 - AO356_25790 0.27 -1.4 5,831,675 - AO356_25790 0.27 -0.6 5,831,677 - AO356_25790 0.27 -0.6 5,831,894 - AO356_25790 0.50 -1.5 5,832,349 + +0.2 5,832,350 - -0.1 5,832,350 - +0.1 5,832,393 + +2.6 5,832,393 + -1.1 5,832,394 - +1.4 5,832,394 - +0.3 5,832,394 - +0.4 5,832,399 + +0.2 5,832,399 + +0.2 5,832,903 + AO356_25795 0.68 +0.4 5,833,056 + AO356_25795 0.87 -0.1 5,833,056 + AO356_25795 0.87 -0.1 5,833,158 + -0.0
Or see this region's nucleotide sequence