Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22865 and AO356_22870 are separated by 284 nucleotides AO356_22870 and AO356_22875 are separated by 188 nucleotides
AO356_22865: AO356_22865 - CdaR family transcriptional regulator, at 5,102,841 to 5,103,965
_22865
AO356_22870: AO356_22870 - glycerate kinase, at 5,104,250 to 5,105,386
_22870
AO356_22875: AO356_22875 - chemotaxis protein, at 5,105,575 to 5,107,200
_22875
Position (kb)
5104
5105
5106 Strain fitness (log2 ratio)
-1
0
1
2 at 5103.334 kb on - strand, within AO356_22865 at 5103.918 kb on + strand at 5103.918 kb on + strand at 5103.918 kb on + strand at 5103.919 kb on - strand at 5103.919 kb on - strand at 5103.919 kb on - strand at 5103.919 kb on - strand at 5103.963 kb on + strand at 5103.963 kb on + strand at 5104.010 kb on + strand at 5104.010 kb on + strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.015 kb on - strand at 5104.075 kb on + strand at 5104.075 kb on + strand at 5104.076 kb on - strand at 5104.146 kb on - strand at 5104.164 kb on + strand at 5104.246 kb on + strand at 5104.246 kb on + strand at 5104.246 kb on + strand at 5104.246 kb on + strand at 5104.247 kb on - strand at 5104.249 kb on + strand at 5104.250 kb on - strand at 5104.584 kb on - strand, within AO356_22870 at 5104.584 kb on - strand, within AO356_22870 at 5104.584 kb on - strand, within AO356_22870 at 5105.249 kb on + strand, within AO356_22870 at 5105.250 kb on - strand, within AO356_22870 at 5105.250 kb on - strand, within AO356_22870 at 5105.400 kb on + strand at 5105.400 kb on + strand at 5105.400 kb on + strand at 5105.449 kb on - strand at 5105.492 kb on - strand at 5105.516 kb on + strand at 5105.516 kb on + strand at 5105.529 kb on - strand at 5105.583 kb on - strand at 5105.657 kb on + strand at 5105.878 kb on + strand, within AO356_22875 at 5105.917 kb on + strand, within AO356_22875 at 5105.918 kb on - strand, within AO356_22875 at 5105.948 kb on - strand, within AO356_22875 at 5106.022 kb on - strand, within AO356_22875 at 5106.066 kb on + strand, within AO356_22875 at 5106.067 kb on - strand, within AO356_22875 at 5106.086 kb on + strand, within AO356_22875 at 5106.086 kb on + strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.127 kb on + strand, within AO356_22875 at 5106.127 kb on + strand, within AO356_22875 at 5106.128 kb on - strand, within AO356_22875 at 5106.128 kb on - strand, within AO356_22875 at 5106.128 kb on - strand, within AO356_22875
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 5,103,334 - AO356_22865 0.44 +0.6 5,103,918 + +0.3 5,103,918 + +0.4 5,103,918 + +1.3 5,103,919 - +0.9 5,103,919 - +0.2 5,103,919 - +0.4 5,103,919 - -0.4 5,103,963 + +0.3 5,103,963 + -0.3 5,104,010 + +0.7 5,104,010 + -0.2 5,104,015 - -0.1 5,104,015 - +0.6 5,104,015 - +0.3 5,104,015 - -0.7 5,104,015 - +1.4 5,104,015 - +0.2 5,104,015 - +0.0 5,104,015 - +0.9 5,104,015 - -0.2 5,104,015 - -0.5 5,104,015 - +0.9 5,104,075 + +0.3 5,104,075 + -0.8 5,104,076 - -0.4 5,104,146 - -0.1 5,104,164 + -0.7 5,104,246 + -0.2 5,104,246 + +0.3 5,104,246 + -0.9 5,104,246 + -1.0 5,104,247 - +0.2 5,104,249 + +0.2 5,104,250 - +0.3 5,104,584 - AO356_22870 0.29 +1.6 5,104,584 - AO356_22870 0.29 +0.1 5,104,584 - AO356_22870 0.29 -0.1 5,105,249 + AO356_22870 0.88 +0.1 5,105,250 - AO356_22870 0.88 +0.3 5,105,250 - AO356_22870 0.88 -0.5 5,105,400 + +0.4 5,105,400 + +1.1 5,105,400 + -0.2 5,105,449 - -0.0 5,105,492 - -0.3 5,105,516 + +0.8 5,105,516 + +0.7 5,105,529 - -0.1 5,105,583 - +0.0 5,105,657 + +0.5 5,105,878 + AO356_22875 0.19 -0.3 5,105,917 + AO356_22875 0.21 +0.8 5,105,918 - AO356_22875 0.21 -0.4 5,105,948 - AO356_22875 0.23 -0.5 5,106,022 - AO356_22875 0.27 +2.1 5,106,066 + AO356_22875 0.30 -0.1 5,106,067 - AO356_22875 0.30 +0.2 5,106,086 + AO356_22875 0.31 +0.8 5,106,086 + AO356_22875 0.31 -0.2 5,106,087 - AO356_22875 0.31 +0.8 5,106,087 - AO356_22875 0.31 -0.7 5,106,087 - AO356_22875 0.31 -0.7 5,106,087 - AO356_22875 0.31 -0.1 5,106,127 + AO356_22875 0.34 +0.6 5,106,127 + AO356_22875 0.34 +0.1 5,106,128 - AO356_22875 0.34 -0.7 5,106,128 - AO356_22875 0.34 -0.3 5,106,128 - AO356_22875 0.34 +0.7
Or see this region's nucleotide sequence