Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16680 and AO356_16685 are separated by 60 nucleotides AO356_16685 and AO356_16690 overlap by 32 nucleotides AO356_16690 and AO356_16695 are separated by 115 nucleotides
AO356_16680: AO356_16680 - phosphate acetyltransferase, at 3,762,787 to 3,764,886
_16680
AO356_16685: AO356_16685 - pressure-regulated protein, at 3,764,947 to 3,765,285
_16685
AO356_16690: AO356_16690 - peptidylprolyl isomerase, at 3,765,254 to 3,765,739
_16690
AO356_16695: AO356_16695 - glutathione peroxidase, at 3,765,855 to 3,766,337
_16695
Position (kb)
3764
3765
3766 Strain fitness (log2 ratio)
-1
0
1
2 at 3764.104 kb on + strand, within AO356_16680 at 3764.192 kb on + strand, within AO356_16680 at 3764.192 kb on + strand, within AO356_16680 at 3764.193 kb on - strand, within AO356_16680 at 3764.193 kb on - strand, within AO356_16680 at 3764.438 kb on - strand, within AO356_16680 at 3764.438 kb on - strand, within AO356_16680 at 3764.541 kb on - strand, within AO356_16680 at 3764.541 kb on - strand, within AO356_16680 at 3764.609 kb on + strand, within AO356_16680 at 3764.814 kb on + strand at 3764.872 kb on - strand at 3764.897 kb on + strand at 3764.898 kb on - strand at 3764.923 kb on + strand at 3764.923 kb on + strand at 3764.923 kb on + strand at 3764.923 kb on + strand at 3764.923 kb on + strand at 3764.923 kb on + strand at 3764.923 kb on + strand at 3765.022 kb on - strand, within AO356_16685 at 3765.022 kb on - strand, within AO356_16685 at 3765.022 kb on - strand, within AO356_16685 at 3765.022 kb on - strand, within AO356_16685 at 3765.211 kb on + strand, within AO356_16685 at 3765.211 kb on + strand, within AO356_16685 at 3765.234 kb on + strand, within AO356_16685 at 3765.234 kb on + strand, within AO356_16685 at 3765.234 kb on + strand, within AO356_16685 at 3765.235 kb on - strand, within AO356_16685 at 3765.235 kb on - strand, within AO356_16685 at 3765.271 kb on + strand at 3765.271 kb on + strand at 3765.272 kb on - strand at 3765.272 kb on - strand at 3765.272 kb on - strand at 3765.290 kb on + strand at 3765.290 kb on + strand at 3765.291 kb on - strand at 3765.291 kb on - strand at 3765.291 kb on - strand at 3765.291 kb on - strand at 3765.291 kb on - strand at 3765.291 kb on - strand at 3765.291 kb on - strand at 3765.292 kb on + strand at 3765.292 kb on + strand at 3765.292 kb on + strand at 3765.292 kb on + strand at 3765.292 kb on + strand at 3765.292 kb on + strand at 3765.292 kb on + strand at 3765.293 kb on - strand at 3765.293 kb on - strand at 3765.293 kb on - strand at 3765.293 kb on - strand at 3765.293 kb on - strand at 3765.293 kb on - strand at 3765.353 kb on + strand, within AO356_16690 at 3765.353 kb on + strand, within AO356_16690 at 3765.354 kb on - strand, within AO356_16690 at 3765.354 kb on - strand, within AO356_16690 at 3765.407 kb on - strand, within AO356_16690 at 3765.456 kb on - strand, within AO356_16690 at 3765.464 kb on + strand, within AO356_16690 at 3765.791 kb on - strand at 3765.791 kb on - strand at 3765.804 kb on + strand at 3765.804 kb on + strand at 3765.876 kb on - strand at 3765.876 kb on - strand at 3765.876 kb on - strand at 3765.978 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.008 kb on + strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.009 kb on - strand, within AO356_16695 at 3766.110 kb on + strand, within AO356_16695 at 3766.111 kb on - strand, within AO356_16695 at 3766.111 kb on - strand, within AO356_16695 at 3766.111 kb on - strand, within AO356_16695 at 3766.111 kb on - strand, within AO356_16695 at 3766.173 kb on + strand, within AO356_16695 at 3766.174 kb on - strand, within AO356_16695 at 3766.174 kb on - strand, within AO356_16695 at 3766.174 kb on - strand, within AO356_16695 at 3766.217 kb on + strand, within AO356_16695 at 3766.217 kb on + strand, within AO356_16695 at 3766.217 kb on + strand, within AO356_16695 at 3766.217 kb on + strand, within AO356_16695 at 3766.217 kb on + strand, within AO356_16695 at 3766.218 kb on - strand, within AO356_16695
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 3,764,104 + AO356_16680 0.63 +0.1 3,764,192 + AO356_16680 0.67 +0.6 3,764,192 + AO356_16680 0.67 -0.4 3,764,193 - AO356_16680 0.67 -0.2 3,764,193 - AO356_16680 0.67 +0.5 3,764,438 - AO356_16680 0.79 +1.1 3,764,438 - AO356_16680 0.79 -0.8 3,764,541 - AO356_16680 0.84 +0.0 3,764,541 - AO356_16680 0.84 +1.1 3,764,609 + AO356_16680 0.87 +0.8 3,764,814 + +1.0 3,764,872 - -0.9 3,764,897 + -0.2 3,764,898 - -0.7 3,764,923 + -1.1 3,764,923 + -0.4 3,764,923 + -1.2 3,764,923 + +0.0 3,764,923 + +1.1 3,764,923 + +0.1 3,764,923 + +0.1 3,765,022 - AO356_16685 0.22 +1.4 3,765,022 - AO356_16685 0.22 -0.1 3,765,022 - AO356_16685 0.22 -0.4 3,765,022 - AO356_16685 0.22 +1.5 3,765,211 + AO356_16685 0.78 +1.7 3,765,211 + AO356_16685 0.78 +0.2 3,765,234 + AO356_16685 0.85 -0.0 3,765,234 + AO356_16685 0.85 +0.7 3,765,234 + AO356_16685 0.85 +0.2 3,765,235 - AO356_16685 0.85 +1.3 3,765,235 - AO356_16685 0.85 +0.3 3,765,271 + +1.0 3,765,271 + +0.1 3,765,272 - +0.9 3,765,272 - +1.2 3,765,272 - +0.3 3,765,290 + +0.8 3,765,290 + -0.4 3,765,291 - +0.3 3,765,291 - +0.3 3,765,291 - -0.2 3,765,291 - +0.2 3,765,291 - +0.8 3,765,291 - +0.4 3,765,291 - +1.1 3,765,292 + +1.1 3,765,292 + -1.2 3,765,292 + +0.3 3,765,292 + +0.2 3,765,292 + +0.7 3,765,292 + +0.2 3,765,292 + +0.4 3,765,293 - -0.6 3,765,293 - +0.4 3,765,293 - +1.8 3,765,293 - +0.3 3,765,293 - +1.0 3,765,293 - +0.4 3,765,353 + AO356_16690 0.20 +0.8 3,765,353 + AO356_16690 0.20 +0.4 3,765,354 - AO356_16690 0.21 +0.7 3,765,354 - AO356_16690 0.21 +0.8 3,765,407 - AO356_16690 0.31 +0.0 3,765,456 - AO356_16690 0.42 -0.1 3,765,464 + AO356_16690 0.43 +0.7 3,765,791 - -0.8 3,765,791 - +0.1 3,765,804 + -0.0 3,765,804 + -0.8 3,765,876 - -0.7 3,765,876 - +1.4 3,765,876 - +0.6 3,765,978 + AO356_16695 0.25 -0.8 3,766,008 + AO356_16695 0.32 -0.3 3,766,008 + AO356_16695 0.32 +0.1 3,766,008 + AO356_16695 0.32 -0.4 3,766,008 + AO356_16695 0.32 -0.9 3,766,008 + AO356_16695 0.32 -0.3 3,766,008 + AO356_16695 0.32 -0.7 3,766,008 + AO356_16695 0.32 +0.6 3,766,008 + AO356_16695 0.32 -0.4 3,766,008 + AO356_16695 0.32 +1.3 3,766,008 + AO356_16695 0.32 +0.7 3,766,009 - AO356_16695 0.32 +0.3 3,766,009 - AO356_16695 0.32 +0.2 3,766,009 - AO356_16695 0.32 +0.1 3,766,009 - AO356_16695 0.32 -0.1 3,766,009 - AO356_16695 0.32 +0.5 3,766,009 - AO356_16695 0.32 -0.7 3,766,009 - AO356_16695 0.32 -0.3 3,766,110 + AO356_16695 0.53 +0.2 3,766,111 - AO356_16695 0.53 +0.6 3,766,111 - AO356_16695 0.53 +0.6 3,766,111 - AO356_16695 0.53 +1.1 3,766,111 - AO356_16695 0.53 +0.7 3,766,173 + AO356_16695 0.66 +0.2 3,766,174 - AO356_16695 0.66 +0.5 3,766,174 - AO356_16695 0.66 -0.7 3,766,174 - AO356_16695 0.66 +1.2 3,766,217 + AO356_16695 0.75 +0.4 3,766,217 + AO356_16695 0.75 +1.0 3,766,217 + AO356_16695 0.75 -0.7 3,766,217 + AO356_16695 0.75 -0.9 3,766,217 + AO356_16695 0.75 +0.2 3,766,218 - AO356_16695 0.75 -0.8
Or see this region's nucleotide sequence