Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16235 and AO356_16240 are separated by 188 nucleotides AO356_16240 and AO356_16245 overlap by 4 nucleotides AO356_16245 and AO356_16250 overlap by 11 nucleotides
AO356_16235: AO356_16235 - mammalian cell entry protein, at 3,668,745 to 3,671,048
_16235
AO356_16240: AO356_16240 - chromosome partitioning protein ParA, at 3,671,237 to 3,674,077
_16240
AO356_16245: AO356_16245 - chromosome partitioning protein, at 3,674,074 to 3,674,775
_16245
AO356_16250: AO356_16250 - hypothetical protein, at 3,674,765 to 3,676,045
_16250
Position (kb)
3671
3672
3673
3674
3675 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3670.349 kb on + strand, within AO356_16235 at 3670.439 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.551 kb on + strand, within AO356_16235 at 3670.552 kb on - strand, within AO356_16235 at 3670.552 kb on - strand, within AO356_16235 at 3670.552 kb on - strand, within AO356_16235 at 3670.631 kb on + strand, within AO356_16235 at 3670.632 kb on - strand, within AO356_16235 at 3670.707 kb on + strand, within AO356_16235 at 3670.707 kb on + strand, within AO356_16235 at 3670.707 kb on + strand, within AO356_16235 at 3670.708 kb on - strand, within AO356_16235 at 3670.708 kb on - strand, within AO356_16235 at 3670.797 kb on + strand, within AO356_16235 at 3670.797 kb on + strand, within AO356_16235 at 3670.797 kb on + strand, within AO356_16235 at 3670.797 kb on + strand, within AO356_16235 at 3670.797 kb on + strand, within AO356_16235 at 3670.798 kb on - strand, within AO356_16235 at 3670.798 kb on - strand, within AO356_16235 at 3670.949 kb on + strand at 3670.949 kb on + strand at 3670.949 kb on + strand at 3670.949 kb on + strand at 3670.995 kb on - strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.046 kb on + strand at 3671.047 kb on - strand at 3671.047 kb on - strand at 3671.047 kb on - strand at 3671.047 kb on - strand at 3671.047 kb on - strand at 3671.058 kb on + strand at 3671.310 kb on + strand at 3671.310 kb on + strand at 3671.310 kb on + strand at 3671.310 kb on + strand at 3671.310 kb on + strand at 3671.311 kb on - strand at 3671.311 kb on - strand at 3671.311 kb on - strand at 3671.311 kb on - strand at 3671.334 kb on + strand at 3671.334 kb on + strand at 3671.334 kb on + strand at 3671.334 kb on + strand at 3671.334 kb on + strand at 3671.334 kb on + strand at 3671.335 kb on - strand at 3671.335 kb on - strand at 3671.493 kb on + strand at 3671.493 kb on + strand at 3671.493 kb on + strand at 3671.493 kb on + strand at 3671.493 kb on + strand at 3671.494 kb on - strand at 3671.494 kb on - strand at 3671.494 kb on - strand at 3671.494 kb on - strand at 3671.496 kb on + strand at 3671.497 kb on - strand at 3671.497 kb on - strand at 3671.497 kb on - strand at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.550 kb on + strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.551 kb on - strand, within AO356_16240 at 3671.718 kb on + strand, within AO356_16240 at 3671.719 kb on - strand, within AO356_16240 at 3671.719 kb on - strand, within AO356_16240 at 3671.719 kb on - strand, within AO356_16240 at 3671.799 kb on + strand, within AO356_16240 at 3671.946 kb on + strand, within AO356_16240 at 3671.947 kb on - strand, within AO356_16240 at 3671.947 kb on - strand, within AO356_16240 at 3672.126 kb on + strand, within AO356_16240 at 3672.126 kb on + strand, within AO356_16240 at 3672.126 kb on + strand, within AO356_16240 at 3672.126 kb on + strand, within AO356_16240 at 3672.127 kb on - strand, within AO356_16240 at 3672.127 kb on - strand, within AO356_16240 at 3672.509 kb on + strand, within AO356_16240 at 3672.520 kb on - strand, within AO356_16240 at 3672.873 kb on + strand, within AO356_16240 at 3672.873 kb on + strand, within AO356_16240 at 3672.874 kb on - strand, within AO356_16240 at 3672.874 kb on - strand, within AO356_16240 at 3672.874 kb on - strand, within AO356_16240 at 3672.874 kb on - strand, within AO356_16240 at 3672.874 kb on - strand, within AO356_16240 at 3673.025 kb on + strand, within AO356_16240 at 3673.025 kb on + strand, within AO356_16240 at 3673.025 kb on + strand, within AO356_16240 at 3673.025 kb on + strand, within AO356_16240 at 3673.025 kb on + strand, within AO356_16240 at 3673.191 kb on + strand, within AO356_16240 at 3673.208 kb on - strand, within AO356_16240 at 3673.237 kb on - strand, within AO356_16240 at 3673.368 kb on + strand, within AO356_16240 at 3673.368 kb on + strand, within AO356_16240 at 3673.369 kb on - strand, within AO356_16240 at 3673.369 kb on - strand, within AO356_16240 at 3673.369 kb on - strand, within AO356_16240 at 3673.369 kb on - strand, within AO356_16240 at 3673.369 kb on - strand, within AO356_16240 at 3673.369 kb on - strand, within AO356_16240 at 3673.388 kb on + strand, within AO356_16240 at 3673.388 kb on + strand, within AO356_16240 at 3673.389 kb on - strand, within AO356_16240 at 3673.389 kb on - strand, within AO356_16240 at 3673.422 kb on + strand, within AO356_16240 at 3673.422 kb on + strand, within AO356_16240 at 3673.422 kb on + strand, within AO356_16240 at 3673.648 kb on - strand, within AO356_16240 at 3673.648 kb on - strand, within AO356_16240 at 3673.720 kb on - strand, within AO356_16240 at 3673.746 kb on + strand, within AO356_16240 at 3673.746 kb on + strand, within AO356_16240 at 3673.746 kb on + strand, within AO356_16240 at 3673.747 kb on - strand, within AO356_16240 at 3673.747 kb on - strand, within AO356_16240 at 3673.842 kb on + strand at 3673.842 kb on + strand at 3673.842 kb on + strand at 3673.843 kb on - strand at 3673.843 kb on - strand at 3673.843 kb on - strand at 3673.843 kb on - strand at 3673.863 kb on + strand at 3673.890 kb on + strand at 3673.891 kb on - strand at 3673.891 kb on - strand at 3674.591 kb on + strand, within AO356_16245 at 3674.591 kb on + strand, within AO356_16245 at 3674.591 kb on + strand, within AO356_16245 at 3674.591 kb on + strand, within AO356_16245 at 3674.591 kb on + strand, within AO356_16245 at 3674.592 kb on - strand, within AO356_16245 at 3674.592 kb on - strand, within AO356_16245 at 3674.592 kb on - strand, within AO356_16245 at 3674.592 kb on - strand, within AO356_16245 at 3674.594 kb on + strand, within AO356_16245 at 3674.594 kb on + strand, within AO356_16245 at 3674.594 kb on + strand, within AO356_16245 at 3674.595 kb on - strand, within AO356_16245 at 3674.595 kb on - strand, within AO356_16245 at 3674.595 kb on - strand, within AO356_16245 at 3674.595 kb on - strand, within AO356_16245 at 3674.595 kb on - strand, within AO356_16245 at 3674.682 kb on - strand, within AO356_16245 at 3674.711 kb on + strand at 3674.761 kb on + strand at 3674.762 kb on - strand at 3674.866 kb on - strand at 3674.928 kb on + strand, within AO356_16250
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 3,670,349 + AO356_16235 0.70 -0.4 3,670,439 + AO356_16235 0.74 +0.0 3,670,551 + AO356_16235 0.78 -1.2 3,670,551 + AO356_16235 0.78 -0.3 3,670,551 + AO356_16235 0.78 -1.4 3,670,551 + AO356_16235 0.78 -0.8 3,670,551 + AO356_16235 0.78 -0.5 3,670,551 + AO356_16235 0.78 -0.5 3,670,551 + AO356_16235 0.78 -0.3 3,670,551 + AO356_16235 0.78 +0.5 3,670,552 - AO356_16235 0.78 -1.1 3,670,552 - AO356_16235 0.78 -1.4 3,670,552 - AO356_16235 0.78 +0.9 3,670,631 + AO356_16235 0.82 -2.5 3,670,632 - AO356_16235 0.82 -1.8 3,670,707 + AO356_16235 0.85 -0.7 3,670,707 + AO356_16235 0.85 -1.2 3,670,707 + AO356_16235 0.85 -1.6 3,670,708 - AO356_16235 0.85 +0.3 3,670,708 - AO356_16235 0.85 -0.5 3,670,797 + AO356_16235 0.89 -1.1 3,670,797 + AO356_16235 0.89 +0.8 3,670,797 + AO356_16235 0.89 +0.8 3,670,797 + AO356_16235 0.89 -1.4 3,670,797 + AO356_16235 0.89 -0.4 3,670,798 - AO356_16235 0.89 -0.0 3,670,798 - AO356_16235 0.89 -1.3 3,670,949 + +0.3 3,670,949 + -0.1 3,670,949 + +0.3 3,670,949 + -1.6 3,670,995 - -1.3 3,671,046 + +0.2 3,671,046 + -0.3 3,671,046 + -1.4 3,671,046 + +1.0 3,671,046 + -0.2 3,671,046 + +1.0 3,671,046 + +0.4 3,671,046 + +0.7 3,671,046 + -0.4 3,671,047 - -1.1 3,671,047 - +1.4 3,671,047 - +0.1 3,671,047 - -0.9 3,671,047 - +0.5 3,671,058 + -2.1 3,671,310 + +0.5 3,671,310 + +0.9 3,671,310 + +0.3 3,671,310 + -1.2 3,671,310 + +0.2 3,671,311 - +0.6 3,671,311 - -1.1 3,671,311 - -0.2 3,671,311 - +0.1 3,671,334 + -0.2 3,671,334 + +1.2 3,671,334 + +0.8 3,671,334 + +0.2 3,671,334 + -1.5 3,671,334 + +0.0 3,671,335 - -0.5 3,671,335 - +0.4 3,671,493 + -0.0 3,671,493 + +0.0 3,671,493 + -0.4 3,671,493 + -0.2 3,671,493 + -0.5 3,671,494 - -0.2 3,671,494 - +0.2 3,671,494 - +0.4 3,671,494 - -1.6 3,671,496 + +1.1 3,671,497 - -0.0 3,671,497 - -0.2 3,671,497 - +1.3 3,671,550 + AO356_16240 0.11 +2.2 3,671,550 + AO356_16240 0.11 +0.2 3,671,550 + AO356_16240 0.11 -1.1 3,671,550 + AO356_16240 0.11 +0.3 3,671,550 + AO356_16240 0.11 -1.5 3,671,550 + AO356_16240 0.11 +1.4 3,671,550 + AO356_16240 0.11 -1.2 3,671,550 + AO356_16240 0.11 +0.2 3,671,550 + AO356_16240 0.11 -0.3 3,671,550 + AO356_16240 0.11 +0.7 3,671,551 - AO356_16240 0.11 +0.7 3,671,551 - AO356_16240 0.11 -0.9 3,671,551 - AO356_16240 0.11 +0.3 3,671,551 - AO356_16240 0.11 -0.3 3,671,551 - AO356_16240 0.11 +0.3 3,671,551 - AO356_16240 0.11 +0.6 3,671,551 - AO356_16240 0.11 -0.4 3,671,551 - AO356_16240 0.11 +0.3 3,671,551 - AO356_16240 0.11 +0.8 3,671,551 - AO356_16240 0.11 -0.6 3,671,551 - AO356_16240 0.11 -0.0 3,671,551 - AO356_16240 0.11 +1.3 3,671,551 - AO356_16240 0.11 +0.2 3,671,718 + AO356_16240 0.17 +1.0 3,671,719 - AO356_16240 0.17 -0.4 3,671,719 - AO356_16240 0.17 -0.8 3,671,719 - AO356_16240 0.17 +0.7 3,671,799 + AO356_16240 0.20 +1.1 3,671,946 + AO356_16240 0.25 -0.3 3,671,947 - AO356_16240 0.25 +0.2 3,671,947 - AO356_16240 0.25 +0.1 3,672,126 + AO356_16240 0.31 +1.2 3,672,126 + AO356_16240 0.31 -1.3 3,672,126 + AO356_16240 0.31 +0.3 3,672,126 + AO356_16240 0.31 -0.3 3,672,127 - AO356_16240 0.31 +0.1 3,672,127 - AO356_16240 0.31 +0.1 3,672,509 + AO356_16240 0.45 -0.3 3,672,520 - AO356_16240 0.45 -0.1 3,672,873 + AO356_16240 0.58 +0.0 3,672,873 + AO356_16240 0.58 -0.7 3,672,874 - AO356_16240 0.58 +0.5 3,672,874 - AO356_16240 0.58 -0.2 3,672,874 - AO356_16240 0.58 -1.9 3,672,874 - AO356_16240 0.58 +0.0 3,672,874 - AO356_16240 0.58 +0.8 3,673,025 + AO356_16240 0.63 +0.7 3,673,025 + AO356_16240 0.63 +0.5 3,673,025 + AO356_16240 0.63 +0.7 3,673,025 + AO356_16240 0.63 -0.3 3,673,025 + AO356_16240 0.63 -0.2 3,673,191 + AO356_16240 0.69 -0.1 3,673,208 - AO356_16240 0.69 -2.3 3,673,237 - AO356_16240 0.70 +0.2 3,673,368 + AO356_16240 0.75 +0.7 3,673,368 + AO356_16240 0.75 -0.7 3,673,369 - AO356_16240 0.75 -1.3 3,673,369 - AO356_16240 0.75 -1.2 3,673,369 - AO356_16240 0.75 +1.2 3,673,369 - AO356_16240 0.75 -0.3 3,673,369 - AO356_16240 0.75 -0.4 3,673,369 - AO356_16240 0.75 +1.2 3,673,388 + AO356_16240 0.76 -0.1 3,673,388 + AO356_16240 0.76 -0.8 3,673,389 - AO356_16240 0.76 -0.4 3,673,389 - AO356_16240 0.76 -0.1 3,673,422 + AO356_16240 0.77 -1.6 3,673,422 + AO356_16240 0.77 -1.6 3,673,422 + AO356_16240 0.77 -0.4 3,673,648 - AO356_16240 0.85 +0.1 3,673,648 - AO356_16240 0.85 +0.8 3,673,720 - AO356_16240 0.87 -0.2 3,673,746 + AO356_16240 0.88 +0.3 3,673,746 + AO356_16240 0.88 +0.2 3,673,746 + AO356_16240 0.88 -0.4 3,673,747 - AO356_16240 0.88 -0.4 3,673,747 - AO356_16240 0.88 +0.2 3,673,842 + +1.1 3,673,842 + +1.5 3,673,842 + +0.8 3,673,843 - +0.2 3,673,843 - +0.5 3,673,843 - +0.4 3,673,843 - +0.6 3,673,863 + +0.2 3,673,890 + +1.3 3,673,891 - +1.0 3,673,891 - -1.0 3,674,591 + AO356_16245 0.74 +0.0 3,674,591 + AO356_16245 0.74 +0.2 3,674,591 + AO356_16245 0.74 -0.4 3,674,591 + AO356_16245 0.74 +0.5 3,674,591 + AO356_16245 0.74 -0.3 3,674,592 - AO356_16245 0.74 +1.5 3,674,592 - AO356_16245 0.74 -0.0 3,674,592 - AO356_16245 0.74 -0.5 3,674,592 - AO356_16245 0.74 -0.3 3,674,594 + AO356_16245 0.74 -0.1 3,674,594 + AO356_16245 0.74 +0.2 3,674,594 + AO356_16245 0.74 +0.6 3,674,595 - AO356_16245 0.74 -0.3 3,674,595 - AO356_16245 0.74 -0.1 3,674,595 - AO356_16245 0.74 -0.3 3,674,595 - AO356_16245 0.74 +0.2 3,674,595 - AO356_16245 0.74 +0.5 3,674,682 - AO356_16245 0.87 -0.1 3,674,711 + +0.8 3,674,761 + +0.1 3,674,762 - +0.1 3,674,866 - +1.0 3,674,928 + AO356_16250 0.13 -0.0
Or see this region's nucleotide sequence