Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4203
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
49,620 | + | Dshi_4202 | 0.65 | +0.7 | |
49,620 | + | Dshi_4202 | 0.65 | -0.1 | |
49,962 | - | Dshi_4202 | 0.79 | -0.8 | |
49,998 | + | Dshi_4202 | 0.81 | +0.6 | |
50,107 | - | Dshi_4202 | 0.86 | -0.5 | |
50,324 | - | -1.3 | |||
50,366 | + | -0.6 | |||
50,516 | + | +0.3 | |||
50,632 | - | Dshi_4203 | 0.13 | +0.9 | |
50,639 | + | Dshi_4203 | 0.13 | +1.9 | |
50,660 | + | Dshi_4203 | 0.15 | +0.6 | |
50,678 | - | Dshi_4203 | 0.17 | +0.2 | |
50,784 | + | Dshi_4203 | 0.27 | +1.3 | |
50,846 | + | Dshi_4203 | 0.33 | -0.5 | |
50,890 | - | Dshi_4203 | 0.37 | +3.3 | |
50,896 | - | Dshi_4203 | 0.38 | -0.2 | |
50,922 | - | Dshi_4203 | 0.40 | -0.6 | |
51,164 | + | Dshi_4203 | 0.63 | +0.1 | |
51,194 | + | Dshi_4203 | 0.66 | +0.5 | |
51,196 | - | Dshi_4203 | 0.66 | -1.3 | |
51,372 | - | Dshi_4203 | 0.83 | -0.3 | |
51,374 | + | Dshi_4203 | 0.83 | +1.3 | |
51,414 | + | Dshi_4203 | 0.87 | +1.6 | |
52,064 | - | Dshi_4204 | 0.77 | +0.5 | |
52,299 | + | +1.4 | |||
52,349 | - | Dshi_4205 | 0.12 | +0.3 | |
52,414 | - | Dshi_4205 | 0.16 | -1.5 | |
52,425 | - | Dshi_4205 | 0.17 | +0.7 |
Or see this region's nucleotide sequence