Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3928 and Dshi_3929 are separated by 50 nucleotides Dshi_3929 and Dshi_3930 are separated by 9 nucleotides
Dshi_3928: Dshi_3928 - homocysteine S-methyltransferase (RefSeq), at 150,931 to 151,857
_3928
Dshi_3929: Dshi_3929 - hypothetical protein (RefSeq), at 151,908 to 152,129
_3929
Dshi_3930: Dshi_3930 - transcriptional regulator, GntR family (RefSeq), at 152,139 to 152,852
_3930
Position (kb)
152
153 Strain fitness (log2 ratio)
-2
-1
0
1 at 151.303 kb on - strand, within Dshi_3928 at 151.427 kb on - strand, within Dshi_3928 at 151.428 kb on - strand, within Dshi_3928 at 151.489 kb on + strand, within Dshi_3928 at 151.521 kb on + strand, within Dshi_3928 at 151.641 kb on - strand, within Dshi_3928 at 151.710 kb on + strand, within Dshi_3928 at 151.715 kb on + strand, within Dshi_3928 at 151.718 kb on - strand, within Dshi_3928 at 151.723 kb on - strand, within Dshi_3928 at 151.876 kb on + strand at 151.918 kb on + strand at 151.983 kb on - strand, within Dshi_3929 at 152.142 kb on + strand at 152.219 kb on + strand, within Dshi_3930 at 152.219 kb on + strand, within Dshi_3930 at 152.227 kb on - strand, within Dshi_3930 at 152.297 kb on - strand, within Dshi_3930 at 152.398 kb on - strand, within Dshi_3930 at 152.498 kb on + strand, within Dshi_3930 at 152.545 kb on - strand, within Dshi_3930 at 152.569 kb on + strand, within Dshi_3930 at 152.596 kb on + strand, within Dshi_3930 at 152.686 kb on + strand, within Dshi_3930 at 152.706 kb on - strand, within Dshi_3930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 151,303 - Dshi_3928 0.40 +0.4 151,427 - Dshi_3928 0.54 -1.7 151,428 - Dshi_3928 0.54 +0.4 151,489 + Dshi_3928 0.60 +0.1 151,521 + Dshi_3928 0.64 +0.3 151,641 - Dshi_3928 0.77 -0.0 151,710 + Dshi_3928 0.84 -1.1 151,715 + Dshi_3928 0.85 +0.9 151,718 - Dshi_3928 0.85 +0.2 151,723 - Dshi_3928 0.85 -0.5 151,876 + -0.7 151,918 + -0.4 151,983 - Dshi_3929 0.34 +1.0 152,142 + +1.1 152,219 + Dshi_3930 0.11 -1.1 152,219 + Dshi_3930 0.11 +0.5 152,227 - Dshi_3930 0.12 -1.9 152,297 - Dshi_3930 0.22 +0.3 152,398 - Dshi_3930 0.36 -0.8 152,498 + Dshi_3930 0.50 -0.6 152,545 - Dshi_3930 0.57 -0.8 152,569 + Dshi_3930 0.60 -0.1 152,596 + Dshi_3930 0.64 -0.7 152,686 + Dshi_3930 0.77 +0.6 152,706 - Dshi_3930 0.79 -1.0
Or see this region's nucleotide sequence