Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3866 and Dshi_3867 are separated by 4 nucleotides Dshi_3867 and Dshi_3868 are separated by 95 nucleotides Dshi_3868 and Dshi_3869 are separated by 62 nucleotides
Dshi_3866: Dshi_3866 - glycosyl transferase group 1 (RefSeq), at 75,905 to 79,813
_3866
Dshi_3867: Dshi_3867 - hypothetical protein (RefSeq), at 79,818 to 80,708
_3867
Dshi_3868: Dshi_3868 - UDP-glucose 4-epimerase (RefSeq), at 80,804 to 81,883
_3868
Dshi_3869: Dshi_3869 - hypothetical protein (RefSeq), at 81,946 to 83,121
_3869
Position (kb)
80
81
82 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 79.928 kb on + strand, within Dshi_3867 at 79.936 kb on - strand, within Dshi_3867 at 79.938 kb on + strand, within Dshi_3867 at 79.943 kb on + strand, within Dshi_3867 at 79.947 kb on + strand, within Dshi_3867 at 79.974 kb on - strand, within Dshi_3867 at 80.009 kb on + strand, within Dshi_3867 at 80.011 kb on + strand, within Dshi_3867 at 80.039 kb on - strand, within Dshi_3867 at 80.047 kb on + strand, within Dshi_3867 at 80.171 kb on - strand, within Dshi_3867 at 80.198 kb on + strand, within Dshi_3867 at 80.399 kb on - strand, within Dshi_3867 at 80.428 kb on + strand, within Dshi_3867 at 80.428 kb on + strand, within Dshi_3867 at 80.428 kb on + strand, within Dshi_3867 at 80.466 kb on - strand, within Dshi_3867 at 80.519 kb on + strand, within Dshi_3867 at 80.534 kb on + strand, within Dshi_3867 at 80.554 kb on + strand, within Dshi_3867 at 80.603 kb on + strand, within Dshi_3867 at 80.643 kb on + strand at 80.683 kb on + strand at 80.683 kb on + strand at 80.683 kb on + strand at 80.683 kb on - strand at 80.698 kb on + strand at 80.711 kb on - strand at 80.758 kb on - strand at 80.769 kb on + strand at 80.777 kb on - strand at 80.803 kb on - strand at 80.815 kb on - strand at 80.830 kb on + strand at 80.948 kb on + strand, within Dshi_3868 at 81.006 kb on - strand, within Dshi_3868 at 81.029 kb on - strand, within Dshi_3868 at 81.086 kb on - strand, within Dshi_3868 at 81.101 kb on - strand, within Dshi_3868 at 81.107 kb on - strand, within Dshi_3868 at 81.166 kb on + strand, within Dshi_3868 at 81.201 kb on - strand, within Dshi_3868 at 81.270 kb on + strand, within Dshi_3868 at 81.270 kb on + strand, within Dshi_3868 at 81.319 kb on + strand, within Dshi_3868 at 81.326 kb on + strand, within Dshi_3868 at 81.327 kb on - strand, within Dshi_3868 at 81.343 kb on + strand, within Dshi_3868 at 81.430 kb on + strand, within Dshi_3868 at 81.438 kb on + strand, within Dshi_3868 at 81.475 kb on + strand, within Dshi_3868 at 81.531 kb on + strand, within Dshi_3868 at 81.534 kb on + strand, within Dshi_3868 at 81.563 kb on + strand, within Dshi_3868 at 81.563 kb on + strand, within Dshi_3868 at 81.568 kb on + strand, within Dshi_3868 at 81.576 kb on - strand, within Dshi_3868 at 81.626 kb on - strand, within Dshi_3868 at 81.695 kb on + strand, within Dshi_3868 at 81.695 kb on + strand, within Dshi_3868 at 81.698 kb on - strand, within Dshi_3868 at 81.732 kb on + strand, within Dshi_3868 at 81.740 kb on - strand, within Dshi_3868 at 81.742 kb on + strand, within Dshi_3868 at 81.750 kb on - strand, within Dshi_3868 at 81.807 kb on - strand at 81.807 kb on - strand at 81.825 kb on + strand at 81.825 kb on + strand at 81.833 kb on - strand at 81.833 kb on - strand at 81.860 kb on + strand at 81.897 kb on + strand at 81.905 kb on - strand at 81.907 kb on + strand at 81.953 kb on - strand at 81.957 kb on + strand at 81.967 kb on + strand at 82.085 kb on + strand, within Dshi_3869 at 82.162 kb on + strand, within Dshi_3869 at 82.170 kb on - strand, within Dshi_3869 at 82.238 kb on + strand, within Dshi_3869 at 82.262 kb on - strand, within Dshi_3869 at 82.269 kb on + strand, within Dshi_3869 at 82.277 kb on + strand, within Dshi_3869 at 82.287 kb on + strand, within Dshi_3869 at 82.308 kb on - strand, within Dshi_3869 at 82.365 kb on - strand, within Dshi_3869 at 82.374 kb on + strand, within Dshi_3869 at 82.382 kb on - strand, within Dshi_3869 at 82.382 kb on - strand, within Dshi_3869 at 82.409 kb on + strand, within Dshi_3869 at 82.414 kb on + strand, within Dshi_3869 at 82.521 kb on + strand, within Dshi_3869 at 82.570 kb on - strand, within Dshi_3869 at 82.589 kb on - strand, within Dshi_3869 at 82.749 kb on - strand, within Dshi_3869 at 82.810 kb on - strand, within Dshi_3869 at 82.825 kb on + strand, within Dshi_3869 at 82.833 kb on + strand, within Dshi_3869 at 82.858 kb on - strand, within Dshi_3869
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 79,928 + Dshi_3867 0.12 +1.7 79,936 - Dshi_3867 0.13 +1.4 79,938 + Dshi_3867 0.13 +1.4 79,943 + Dshi_3867 0.14 +0.1 79,947 + Dshi_3867 0.14 +1.3 79,974 - Dshi_3867 0.18 +0.8 80,009 + Dshi_3867 0.21 +1.8 80,011 + Dshi_3867 0.22 +0.8 80,039 - Dshi_3867 0.25 +1.5 80,047 + Dshi_3867 0.26 +1.2 80,171 - Dshi_3867 0.40 +1.4 80,198 + Dshi_3867 0.43 +1.1 80,399 - Dshi_3867 0.65 +0.8 80,428 + Dshi_3867 0.68 -0.2 80,428 + Dshi_3867 0.68 -0.8 80,428 + Dshi_3867 0.68 +0.5 80,466 - Dshi_3867 0.73 +1.4 80,519 + Dshi_3867 0.79 +1.7 80,534 + Dshi_3867 0.80 +0.7 80,554 + Dshi_3867 0.83 +1.3 80,603 + Dshi_3867 0.88 -0.2 80,643 + +2.0 80,683 + +0.4 80,683 + -0.8 80,683 + -0.9 80,683 - +1.3 80,698 + +2.1 80,711 - -1.6 80,758 - -1.2 80,769 + +0.2 80,777 - +1.9 80,803 - +0.1 80,815 - +0.8 80,830 + -0.1 80,948 + Dshi_3868 0.13 +3.4 81,006 - Dshi_3868 0.19 +1.6 81,029 - Dshi_3868 0.21 +0.8 81,086 - Dshi_3868 0.26 +1.9 81,101 - Dshi_3868 0.28 +1.5 81,107 - Dshi_3868 0.28 +1.8 81,166 + Dshi_3868 0.34 +2.1 81,201 - Dshi_3868 0.37 +1.0 81,270 + Dshi_3868 0.43 +1.4 81,270 + Dshi_3868 0.43 +0.6 81,319 + Dshi_3868 0.48 +0.5 81,326 + Dshi_3868 0.48 +1.6 81,327 - Dshi_3868 0.48 +1.3 81,343 + Dshi_3868 0.50 +1.6 81,430 + Dshi_3868 0.58 +1.6 81,438 + Dshi_3868 0.59 +1.4 81,475 + Dshi_3868 0.62 +1.9 81,531 + Dshi_3868 0.67 +2.0 81,534 + Dshi_3868 0.68 +0.9 81,563 + Dshi_3868 0.70 +0.9 81,563 + Dshi_3868 0.70 +1.4 81,568 + Dshi_3868 0.71 +1.4 81,576 - Dshi_3868 0.71 +0.9 81,626 - Dshi_3868 0.76 +2.2 81,695 + Dshi_3868 0.82 +3.1 81,695 + Dshi_3868 0.82 +1.3 81,698 - Dshi_3868 0.83 +1.6 81,732 + Dshi_3868 0.86 +1.9 81,740 - Dshi_3868 0.87 +0.9 81,742 + Dshi_3868 0.87 +2.5 81,750 - Dshi_3868 0.88 +1.3 81,807 - +0.4 81,807 - +2.0 81,825 + +2.4 81,825 + +1.5 81,833 - +1.2 81,833 - +1.1 81,860 + +0.8 81,897 + +0.7 81,905 - -0.1 81,907 + -0.4 81,953 - -0.1 81,957 + +0.4 81,967 + +0.1 82,085 + Dshi_3869 0.12 -1.5 82,162 + Dshi_3869 0.18 +1.1 82,170 - Dshi_3869 0.19 -0.1 82,238 + Dshi_3869 0.25 +0.3 82,262 - Dshi_3869 0.27 +0.3 82,269 + Dshi_3869 0.27 +0.3 82,277 + Dshi_3869 0.28 +0.1 82,287 + Dshi_3869 0.29 -2.6 82,308 - Dshi_3869 0.31 -0.9 82,365 - Dshi_3869 0.36 -1.1 82,374 + Dshi_3869 0.36 +0.0 82,382 - Dshi_3869 0.37 -0.2 82,382 - Dshi_3869 0.37 +1.0 82,409 + Dshi_3869 0.39 -0.5 82,414 + Dshi_3869 0.40 -0.4 82,521 + Dshi_3869 0.49 +0.5 82,570 - Dshi_3869 0.53 -0.8 82,589 - Dshi_3869 0.55 +0.9 82,749 - Dshi_3869 0.68 -0.4 82,810 - Dshi_3869 0.73 -0.9 82,825 + Dshi_3869 0.75 +1.1 82,833 + Dshi_3869 0.75 -0.3 82,858 - Dshi_3869 0.78 +0.3
Or see this region's nucleotide sequence