Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3746

Experiment: m.b. Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_3745 and Dshi_3746 are separated by 239 nucleotidesDshi_3746 and Dshi_3747 are separated by 306 nucleotides Dshi_3745: Dshi_3745 - RC102 (RefSeq), at 151,632 to 152,987 _3745 Dshi_3746: Dshi_3746 - hypothetical protein (RefSeq), at 153,227 to 153,460 _3746 Dshi_3747: Dshi_3747 - hypothetical protein (RefSeq), at 153,767 to 154,930 _3747 Position (kb) 153 154Strain fitness (log2 ratio) -1 0 1 2at 152.380 kb on - strand, within Dshi_3745at 153.218 kb on + strandat 153.298 kb on + strand, within Dshi_3746at 153.409 kb on - strand, within Dshi_3746at 153.443 kb on + strandat 153.516 kb on + strandat 153.538 kb on + strandat 153.611 kb on - strandat 153.738 kb on - strandat 153.772 kb on - strandat 153.772 kb on - strandat 153.774 kb on + strandat 153.881 kb on - strandat 153.881 kb on - strandat 153.927 kb on - strand, within Dshi_3747at 154.064 kb on - strand, within Dshi_3747at 154.091 kb on - strand, within Dshi_3747at 154.127 kb on - strand, within Dshi_3747at 154.164 kb on - strand, within Dshi_3747at 154.198 kb on + strand, within Dshi_3747at 154.223 kb on - strand, within Dshi_3747at 154.225 kb on + strand, within Dshi_3747at 154.251 kb on - strand, within Dshi_3747at 154.304 kb on + strand, within Dshi_3747at 154.328 kb on + strand, within Dshi_3747at 154.396 kb on - strand, within Dshi_3747at 154.433 kb on - strand, within Dshi_3747at 154.442 kb on - strand, within Dshi_3747

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml
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152,380 - Dshi_3745 0.55 +0.0
153,218 + +1.6
153,298 + Dshi_3746 0.30 +0.8
153,409 - Dshi_3746 0.78 +1.9
153,443 + +1.4
153,516 + -0.8
153,538 + -0.6
153,611 - +0.6
153,738 - +0.1
153,772 - -0.6
153,772 - -0.7
153,774 + +0.7
153,881 - +2.7
153,881 - -0.0
153,927 - Dshi_3747 0.14 +0.8
154,064 - Dshi_3747 0.26 +0.6
154,091 - Dshi_3747 0.28 -0.9
154,127 - Dshi_3747 0.31 -0.2
154,164 - Dshi_3747 0.34 +0.7
154,198 + Dshi_3747 0.37 -0.0
154,223 - Dshi_3747 0.39 +1.4
154,225 + Dshi_3747 0.39 -0.2
154,251 - Dshi_3747 0.42 +0.8
154,304 + Dshi_3747 0.46 -0.8
154,328 + Dshi_3747 0.48 +0.0
154,396 - Dshi_3747 0.54 +0.3
154,433 - Dshi_3747 0.57 -0.8
154,442 - Dshi_3747 0.58 +1.1

Or see this region's nucleotide sequence