Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3536 and Dshi_3537 are separated by 31 nucleotides Dshi_3537 and Dshi_3538 are separated by 46 nucleotides Dshi_3538 and Dshi_3539 overlap by 4 nucleotides
Dshi_3536: Dshi_3536 - magnesium chelatase, H subunit (RefSeq), at 3,716,986 to 3,720,570
_3536
Dshi_3537: Dshi_3537 - light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein (RefSeq), at 3,720,602 to 3,721,501
_3537
Dshi_3538: Dshi_3538 - magnesium protoporphyrin O-methyltransferase (RefSeq), at 3,721,548 to 3,722,231
_3538
Dshi_3539: Dshi_3539 - PUCC protein (RefSeq), at 3,722,228 to 3,723,673
_3539
Position (kb)
3720
3721
3722 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3719.722 kb on - strand, within Dshi_3536 at 3719.799 kb on - strand, within Dshi_3536 at 3719.799 kb on - strand, within Dshi_3536 at 3719.874 kb on - strand, within Dshi_3536 at 3719.900 kb on - strand, within Dshi_3536 at 3719.990 kb on + strand, within Dshi_3536 at 3720.146 kb on - strand, within Dshi_3536 at 3720.358 kb on - strand at 3720.382 kb on - strand at 3720.412 kb on + strand at 3720.414 kb on + strand at 3720.434 kb on - strand at 3720.484 kb on - strand at 3720.613 kb on + strand at 3720.621 kb on - strand at 3720.630 kb on - strand at 3720.713 kb on + strand, within Dshi_3537 at 3720.732 kb on - strand, within Dshi_3537 at 3720.732 kb on - strand, within Dshi_3537 at 3720.836 kb on - strand, within Dshi_3537 at 3720.846 kb on + strand, within Dshi_3537 at 3720.904 kb on - strand, within Dshi_3537 at 3720.939 kb on - strand, within Dshi_3537 at 3721.016 kb on - strand, within Dshi_3537 at 3721.055 kb on - strand, within Dshi_3537 at 3721.137 kb on - strand, within Dshi_3537 at 3721.187 kb on + strand, within Dshi_3537 at 3721.202 kb on + strand, within Dshi_3537 at 3721.210 kb on + strand, within Dshi_3537 at 3721.212 kb on - strand, within Dshi_3537 at 3721.385 kb on + strand, within Dshi_3537 at 3721.400 kb on + strand, within Dshi_3537 at 3721.408 kb on - strand, within Dshi_3537 at 3721.423 kb on - strand at 3721.434 kb on + strand at 3721.566 kb on + strand at 3721.566 kb on + strand at 3721.603 kb on + strand at 3721.650 kb on - strand, within Dshi_3538 at 3721.830 kb on - strand, within Dshi_3538 at 3721.834 kb on - strand, within Dshi_3538 at 3721.898 kb on - strand, within Dshi_3538 at 3721.967 kb on - strand, within Dshi_3538 at 3722.053 kb on - strand, within Dshi_3538 at 3722.056 kb on + strand, within Dshi_3538 at 3722.115 kb on - strand, within Dshi_3538 at 3722.126 kb on - strand, within Dshi_3538 at 3722.312 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,719,722 - Dshi_3536 0.76 -0.0 3,719,799 - Dshi_3536 0.78 -0.3 3,719,799 - Dshi_3536 0.78 -1.4 3,719,874 - Dshi_3536 0.81 +0.6 3,719,900 - Dshi_3536 0.81 -0.4 3,719,990 + Dshi_3536 0.84 -1.4 3,720,146 - Dshi_3536 0.88 -0.2 3,720,358 - -0.5 3,720,382 - +1.1 3,720,412 + -0.6 3,720,414 + -3.4 3,720,434 - -0.4 3,720,484 - -1.4 3,720,613 + -0.9 3,720,621 - -2.0 3,720,630 - -0.3 3,720,713 + Dshi_3537 0.12 -0.8 3,720,732 - Dshi_3537 0.14 -1.1 3,720,732 - Dshi_3537 0.14 +0.1 3,720,836 - Dshi_3537 0.26 -0.8 3,720,846 + Dshi_3537 0.27 +0.2 3,720,904 - Dshi_3537 0.34 -0.3 3,720,939 - Dshi_3537 0.37 +0.8 3,721,016 - Dshi_3537 0.46 -0.1 3,721,055 - Dshi_3537 0.50 -1.1 3,721,137 - Dshi_3537 0.59 -0.9 3,721,187 + Dshi_3537 0.65 +0.4 3,721,202 + Dshi_3537 0.67 +0.2 3,721,210 + Dshi_3537 0.68 +0.1 3,721,212 - Dshi_3537 0.68 -0.2 3,721,385 + Dshi_3537 0.87 -1.1 3,721,400 + Dshi_3537 0.89 +1.3 3,721,408 - Dshi_3537 0.90 -0.9 3,721,423 - -0.7 3,721,434 + -0.3 3,721,566 + -0.7 3,721,566 + -0.8 3,721,603 + -1.6 3,721,650 - Dshi_3538 0.15 -2.4 3,721,830 - Dshi_3538 0.41 -0.5 3,721,834 - Dshi_3538 0.42 -1.9 3,721,898 - Dshi_3538 0.51 -2.9 3,721,967 - Dshi_3538 0.61 -0.4 3,722,053 - Dshi_3538 0.74 +0.1 3,722,056 + Dshi_3538 0.74 -1.3 3,722,115 - Dshi_3538 0.83 +0.5 3,722,126 - Dshi_3538 0.85 -1.3 3,722,312 + -0.3
Or see this region's nucleotide sequence