Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3525 and Dshi_3526 are separated by 132 nucleotides Dshi_3526 and Dshi_3527 are separated by 113 nucleotides Dshi_3527 and Dshi_3528 overlap by 4 nucleotides
Dshi_3525: Dshi_3525 - photosynthetic reaction centre cytochrome c subunit (RefSeq), at 3,703,718 to 3,704,800
_3525
Dshi_3526: Dshi_3526 - deoxyxylulose-5-phosphate synthase (RefSeq), at 3,704,933 to 3,706,909
_3526
Dshi_3527: Dshi_3527 - isopentenyl-diphosphate delta-isomerase, type 1 (RefSeq), at 3,707,023 to 3,707,553
_3527
Dshi_3528: Dshi_3528 - geranylgeranyl reductase (RefSeq), at 3,707,550 to 3,708,734
_3528
Position (kb)
3704
3705
3706
3707 Strain fitness (log2 ratio)
-1
0
1
2 at 3703.982 kb on - strand, within Dshi_3525 at 3704.080 kb on + strand, within Dshi_3525 at 3704.103 kb on + strand, within Dshi_3525 at 3704.118 kb on + strand, within Dshi_3525 at 3704.120 kb on - strand, within Dshi_3525 at 3704.128 kb on + strand, within Dshi_3525 at 3704.128 kb on + strand, within Dshi_3525 at 3704.194 kb on - strand, within Dshi_3525 at 3704.202 kb on + strand, within Dshi_3525 at 3704.370 kb on + strand, within Dshi_3525 at 3704.477 kb on - strand, within Dshi_3525 at 3704.540 kb on + strand, within Dshi_3525 at 3704.547 kb on + strand, within Dshi_3525 at 3704.565 kb on - strand, within Dshi_3525 at 3704.676 kb on + strand, within Dshi_3525 at 3705.054 kb on + strand at 3705.109 kb on + strand at 3705.190 kb on - strand, within Dshi_3526 at 3705.264 kb on + strand, within Dshi_3526 at 3705.329 kb on - strand, within Dshi_3526 at 3705.329 kb on - strand, within Dshi_3526 at 3705.475 kb on - strand, within Dshi_3526 at 3705.577 kb on + strand, within Dshi_3526 at 3705.637 kb on + strand, within Dshi_3526 at 3705.711 kb on + strand, within Dshi_3526 at 3705.725 kb on + strand, within Dshi_3526 at 3705.781 kb on + strand, within Dshi_3526 at 3705.815 kb on + strand, within Dshi_3526 at 3705.842 kb on + strand, within Dshi_3526 at 3705.856 kb on - strand, within Dshi_3526 at 3705.868 kb on + strand, within Dshi_3526 at 3705.946 kb on + strand, within Dshi_3526 at 3705.959 kb on - strand, within Dshi_3526 at 3705.959 kb on - strand, within Dshi_3526 at 3706.148 kb on - strand, within Dshi_3526 at 3706.185 kb on + strand, within Dshi_3526 at 3706.190 kb on + strand, within Dshi_3526 at 3706.192 kb on - strand, within Dshi_3526 at 3706.195 kb on + strand, within Dshi_3526 at 3706.266 kb on - strand, within Dshi_3526 at 3706.414 kb on - strand, within Dshi_3526 at 3706.488 kb on - strand, within Dshi_3526 at 3706.508 kb on + strand, within Dshi_3526 at 3706.511 kb on - strand, within Dshi_3526 at 3706.571 kb on - strand, within Dshi_3526 at 3706.663 kb on + strand, within Dshi_3526 at 3706.896 kb on - strand at 3707.780 kb on - strand, within Dshi_3528 at 3707.800 kb on + strand, within Dshi_3528 at 3707.812 kb on + strand, within Dshi_3528
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,703,982 - Dshi_3525 0.24 +0.2 3,704,080 + Dshi_3525 0.33 -0.1 3,704,103 + Dshi_3525 0.36 -1.0 3,704,118 + Dshi_3525 0.37 -0.2 3,704,120 - Dshi_3525 0.37 -0.1 3,704,128 + Dshi_3525 0.38 -0.1 3,704,128 + Dshi_3525 0.38 +0.1 3,704,194 - Dshi_3525 0.44 +0.6 3,704,202 + Dshi_3525 0.45 -1.3 3,704,370 + Dshi_3525 0.60 -0.4 3,704,477 - Dshi_3525 0.70 -0.1 3,704,540 + Dshi_3525 0.76 +0.4 3,704,547 + Dshi_3525 0.77 +0.8 3,704,565 - Dshi_3525 0.78 -1.3 3,704,676 + Dshi_3525 0.88 -1.3 3,705,054 + +0.3 3,705,109 + -0.6 3,705,190 - Dshi_3526 0.13 +0.7 3,705,264 + Dshi_3526 0.17 -0.0 3,705,329 - Dshi_3526 0.20 -1.5 3,705,329 - Dshi_3526 0.20 -0.1 3,705,475 - Dshi_3526 0.27 -0.9 3,705,577 + Dshi_3526 0.33 +1.4 3,705,637 + Dshi_3526 0.36 +0.4 3,705,711 + Dshi_3526 0.39 -1.5 3,705,725 + Dshi_3526 0.40 -0.7 3,705,781 + Dshi_3526 0.43 +1.8 3,705,815 + Dshi_3526 0.45 +0.3 3,705,842 + Dshi_3526 0.46 -1.3 3,705,856 - Dshi_3526 0.47 -0.3 3,705,868 + Dshi_3526 0.47 -1.4 3,705,946 + Dshi_3526 0.51 +0.2 3,705,959 - Dshi_3526 0.52 -0.7 3,705,959 - Dshi_3526 0.52 +0.6 3,706,148 - Dshi_3526 0.61 +0.2 3,706,185 + Dshi_3526 0.63 +0.4 3,706,190 + Dshi_3526 0.64 +0.3 3,706,192 - Dshi_3526 0.64 +0.6 3,706,195 + Dshi_3526 0.64 -0.5 3,706,266 - Dshi_3526 0.67 -0.1 3,706,414 - Dshi_3526 0.75 +0.0 3,706,488 - Dshi_3526 0.79 -0.0 3,706,508 + Dshi_3526 0.80 +0.0 3,706,511 - Dshi_3526 0.80 +0.6 3,706,571 - Dshi_3526 0.83 -0.1 3,706,663 + Dshi_3526 0.88 -1.4 3,706,896 - +0.2 3,707,780 - Dshi_3528 0.19 +0.8 3,707,800 + Dshi_3528 0.21 +1.3 3,707,812 + Dshi_3528 0.22 +0.5
Or see this region's nucleotide sequence