Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3373

Experiment: m.b. Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_3371 and Dshi_3372 are separated by 227 nucleotidesDshi_3372 and Dshi_3373 are separated by 21 nucleotidesDshi_3373 and Dshi_3374 are separated by 136 nucleotides Dshi_3371: Dshi_3371 - ribosomal protein S20 (RefSeq), at 3,543,739 to 3,544,005 _3371 Dshi_3372: Dshi_3372 - hypothetical protein (RefSeq), at 3,544,233 to 3,544,682 _3372 Dshi_3373: Dshi_3373 - chromosomal replication initiator protein DnaA (RefSeq), at 3,544,704 to 3,546,086 _3373 Dshi_3374: Dshi_3374 - DNA polymerase III, beta subunit (RefSeq), at 3,546,223 to 3,547,341 _3374 Position (kb) 3544 3545 3546 3547Strain fitness (log2 ratio) -1 0 1at 3544.564 kb on + strand, within Dshi_3372at 3546.112 kb on + strandat 3546.129 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml
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3,544,564 + Dshi_3372 0.74 +1.7
3,546,112 + -1.2
3,546,129 - +0.8

Or see this region's nucleotide sequence