Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3322 and Dshi_3323 are separated by 274 nucleotides Dshi_3323 and Dshi_3324 overlap by 23 nucleotides
Dshi_3322: Dshi_3322 - transcriptional regulator, LacI family (RefSeq), at 3,484,266 to 3,485,303
_3322
Dshi_3323: Dshi_3323 - transcriptional regulator, GntR family (RefSeq), at 3,485,578 to 3,486,258
_3323
Dshi_3324: Dshi_3324 - FAD linked oxidase domain protein (RefSeq), at 3,486,236 to 3,489,157
_3324
Position (kb)
3485
3486
3487 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3484.689 kb on - strand, within Dshi_3322 at 3484.732 kb on - strand, within Dshi_3322 at 3484.781 kb on - strand, within Dshi_3322 at 3484.885 kb on + strand, within Dshi_3322 at 3484.893 kb on - strand, within Dshi_3322 at 3484.932 kb on + strand, within Dshi_3322 at 3485.157 kb on + strand, within Dshi_3322 at 3485.165 kb on - strand, within Dshi_3322 at 3485.167 kb on - strand, within Dshi_3322 at 3485.227 kb on - strand at 3485.234 kb on + strand at 3485.234 kb on + strand at 3485.242 kb on - strand at 3485.263 kb on + strand at 3485.269 kb on - strand at 3485.276 kb on + strand at 3485.313 kb on + strand at 3485.337 kb on - strand at 3485.361 kb on + strand at 3485.372 kb on + strand at 3485.374 kb on - strand at 3485.384 kb on - strand at 3485.384 kb on - strand at 3485.386 kb on - strand at 3485.391 kb on - strand at 3485.397 kb on + strand at 3485.412 kb on + strand at 3485.415 kb on - strand at 3485.425 kb on - strand at 3485.440 kb on - strand at 3485.481 kb on + strand at 3485.554 kb on - strand at 3485.562 kb on + strand at 3485.565 kb on - strand at 3485.693 kb on + strand, within Dshi_3323 at 3485.701 kb on - strand, within Dshi_3323 at 3485.963 kb on - strand, within Dshi_3323 at 3485.973 kb on + strand, within Dshi_3323 at 3485.990 kb on + strand, within Dshi_3323 at 3486.107 kb on - strand, within Dshi_3323 at 3486.144 kb on + strand, within Dshi_3323 at 3486.144 kb on + strand, within Dshi_3323 at 3486.152 kb on - strand, within Dshi_3323 at 3486.391 kb on + strand at 3486.553 kb on + strand, within Dshi_3324 at 3486.628 kb on + strand, within Dshi_3324 at 3486.882 kb on - strand, within Dshi_3324 at 3486.894 kb on + strand, within Dshi_3324 at 3486.999 kb on - strand, within Dshi_3324 at 3487.015 kb on - strand, within Dshi_3324 at 3487.110 kb on - strand at 3487.132 kb on + strand, within Dshi_3324 at 3487.227 kb on - strand, within Dshi_3324 at 3487.236 kb on - strand, within Dshi_3324 at 3487.253 kb on + strand, within Dshi_3324
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,484,689 - Dshi_3322 0.41 -0.5 3,484,732 - Dshi_3322 0.45 -0.1 3,484,781 - Dshi_3322 0.50 +0.2 3,484,885 + Dshi_3322 0.60 +1.0 3,484,893 - Dshi_3322 0.60 +0.2 3,484,932 + Dshi_3322 0.64 +1.1 3,485,157 + Dshi_3322 0.86 +0.5 3,485,165 - Dshi_3322 0.87 -1.6 3,485,167 - Dshi_3322 0.87 +0.1 3,485,227 - +0.8 3,485,234 + +0.1 3,485,234 + +0.8 3,485,242 - -0.9 3,485,263 + +0.1 3,485,269 - +0.6 3,485,276 + +0.4 3,485,313 + -0.1 3,485,337 - +0.1 3,485,361 + -0.6 3,485,372 + +0.2 3,485,374 - -0.7 3,485,384 - +0.5 3,485,384 - +0.9 3,485,386 - +0.4 3,485,391 - +0.4 3,485,397 + +1.2 3,485,412 + +0.1 3,485,415 - -0.7 3,485,425 - +0.1 3,485,440 - +0.8 3,485,481 + +0.4 3,485,554 - -0.8 3,485,562 + +0.7 3,485,565 - -2.1 3,485,693 + Dshi_3323 0.17 -1.3 3,485,701 - Dshi_3323 0.18 +2.4 3,485,963 - Dshi_3323 0.57 +0.4 3,485,973 + Dshi_3323 0.58 -0.7 3,485,990 + Dshi_3323 0.60 +0.4 3,486,107 - Dshi_3323 0.78 -0.8 3,486,144 + Dshi_3323 0.83 -0.6 3,486,144 + Dshi_3323 0.83 -1.4 3,486,152 - Dshi_3323 0.84 -1.3 3,486,391 + +1.4 3,486,553 + Dshi_3324 0.11 +1.2 3,486,628 + Dshi_3324 0.13 -1.8 3,486,882 - Dshi_3324 0.22 +2.4 3,486,894 + Dshi_3324 0.23 -0.7 3,486,999 - Dshi_3324 0.26 +0.0 3,487,015 - Dshi_3324 0.27 +0.7 3,487,110 - -0.6 3,487,132 + Dshi_3324 0.31 +0.4 3,487,227 - Dshi_3324 0.34 -0.0 3,487,236 - Dshi_3324 0.34 -0.8 3,487,253 + Dshi_3324 0.35 +0.3
Or see this region's nucleotide sequence